Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS004398
(X23124.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Arm fat mass (left) fat pad mass 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004398/ScoringFiles/PGS004398.txt.gz
PGS001145
(GBE_INI23120)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Arm fat mass (R) fat pad mass 23,528
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001145/ScoringFiles/PGS001145.txt.gz
PGS003916
(INI23120)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Arm fat mass (R) fat pad mass 29,790
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003916/ScoringFiles/PGS003916.txt.gz
PGS004394
(X23120.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Arm fat mass (right) fat pad mass 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004394/ScoringFiles/PGS004394.txt.gz
PGS003918
(INI23123)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Arm fat percentage (L) body fat percentage 32,450
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003918/ScoringFiles/PGS003918.txt.gz
PGS004397
(X23123.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Arm fat percentage (left) body fat percentage 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004397/ScoringFiles/PGS004397.txt.gz
PGS001106
(GBE_INI23119)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Arm fat percentage (R) body fat percentage 23,943
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001106/ScoringFiles/PGS001106.txt.gz
PGS003915
(INI23119)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Arm fat percentage (R) body fat percentage 32,448
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003915/ScoringFiles/PGS003915.txt.gz
PGS004393
(X23119.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Arm fat percentage (right) body fat percentage 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004393/ScoringFiles/PGS004393.txt.gz
PGS004400
(X23126.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Arm predicted mass (left) body weights and measures 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004400/ScoringFiles/PGS004400.txt.gz
PGS004396
(X23122.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Arm predicted mass (right) body weights and measures 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004396/ScoringFiles/PGS004396.txt.gz
PGS019200
(TPMI_427.5_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Arrhythmia cardiac NOS cardiac arrhythmia 11
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019200/ScoringFiles/PGS019200.txt.gz
PGS019201
(TPMI_427.5_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Arrhythmia cardiac NOS cardiac arrhythmia 939,875
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019201/ScoringFiles/PGS019201.txt.gz
PGS019202
(TPMI_427.5_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Arrhythmia cardiac NOS cardiac arrhythmia 14,836
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019202/ScoringFiles/PGS019202.txt.gz
PGS019203
(TPMI_427.5_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Arrhythmia cardiac NOS cardiac arrhythmia 983,820
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019203/ScoringFiles/PGS019203.txt.gz
PGS019204
(TPMI_427.5_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Arrhythmia cardiac NOS cardiac arrhythmia 955,432
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019204/ScoringFiles/PGS019204.txt.gz
PGS001135
(GBE_HC78)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Arthritis (nos) arthritic joint disease 1,028
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001135/ScoringFiles/PGS001135.txt.gz
PGS019692
(TPMI_716.9_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Arthropathy NOS arthropathy 19
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019692/ScoringFiles/PGS019692.txt.gz
PGS019693
(TPMI_716.9_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Arthropathy NOS arthropathy 939,890
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019693/ScoringFiles/PGS019693.txt.gz
PGS019694
(TPMI_716.9_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Arthropathy NOS arthropathy 485,041
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019694/ScoringFiles/PGS019694.txt.gz
PGS019695
(TPMI_716.9_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Arthropathy NOS arthropathy 983,823
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019695/ScoringFiles/PGS019695.txt.gz
PGS019696
(TPMI_716.9_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Arthropathy NOS arthropathy 928,818
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019696/ScoringFiles/PGS019696.txt.gz
PGS002236
(PRS_AsAoD)
 PGP000268 |
Tcheandjieu C et al. Nat Genet (2022)
 Ascending aorta diameter (MRI-derived) aortic measurement 92,299
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002236/ScoringFiles/PGS002236.txt.gz
PGS004927
(score_resint_max_aa_shortaxis_cm)
 PGP000663 |
Pirruccello JP et al. Eur Heart J (2024)
 Ascending aortic diameter aortic measurement 1,111,632
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004927/ScoringFiles/PGS004927.txt.gz
PGS002267
(PRS89_AA)
 PGP000296 |
Pirruccello JP et al. Nat Genet (2021)
 Ascending thoracic aortic diameter cardiovascular disease biomarker measurement,
aortic measurement		 89
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002267/ScoringFiles/PGS002267.txt.gz
PGS019180
(TPMI_414.2_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 ASCVD cardiovascular disorder 72
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019180/ScoringFiles/PGS019180.txt.gz
PGS019181
(TPMI_414.2_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 ASCVD cardiovascular disorder 363,229
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019181/ScoringFiles/PGS019181.txt.gz
PGS019182
(TPMI_414.2_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 ASCVD cardiovascular disorder 170,713
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019182/ScoringFiles/PGS019182.txt.gz
PGS019183
(TPMI_414.2_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 ASCVD cardiovascular disorder 983,768
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019183/ScoringFiles/PGS019183.txt.gz
PGS019184
(TPMI_414.2_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 ASCVD cardiovascular disorder 1,022,962
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019184/ScoringFiles/PGS019184.txt.gz
PGS001941
(portability-PLR_log_AST)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Aspartate aminotransferase level aspartate aminotransferase measurement 33,498
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001941/ScoringFiles/PGS001941.txt.gz
PGS002159
(portability-ldpred2_log_AST)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Aspartate aminotransferase level aspartate aminotransferase measurement 716,914
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002159/ScoringFiles/PGS002159.txt.gz
PGS003343
(CVGRS_AST)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 Aspartate aminotransferase level aspartate aminotransferase measurement 54
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003343/ScoringFiles/PGS003343.txt.gz
PGS003352
(ALLGRS_AST)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 Aspartate aminotransferase level aspartate aminotransferase measurement 56
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003352/ScoringFiles/PGS003352.txt.gz
PGS003523
(cont-decay-log_AST)
 PGP000457 |
Ding Y et al. Nature (2023)
 Aspartate aminotransferase level aspartate aminotransferase measurement 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003523/ScoringFiles/PGS003523.txt.gz
PGS004719
(AST_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Aspartate aminotransferase level aspartate aminotransferase measurement 519,241
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004719/ScoringFiles/PGS004719.txt.gz
PGS004720
(AST_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Aspartate aminotransferase level aspartate aminotransferase measurement 1,000,300
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004720/ScoringFiles/PGS004720.txt.gz
PGS004721
(AST_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Aspartate aminotransferase level aspartate aminotransferase measurement 1,196,185
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004721/ScoringFiles/PGS004721.txt.gz
PGS004722
(AST_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Aspartate aminotransferase level aspartate aminotransferase measurement 868,009
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004722/ScoringFiles/PGS004722.txt.gz
PGS004330
(X30650.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Aspartate aminotransferase (U/L) aspartate aminotransferase measurement 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004330/ScoringFiles/PGS004330.txt.gz
PGS000673
(snpnet.Aspartate_aminotransferase)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Aspartate aminotransferase [U/L] aspartate aminotransferase measurement 12,829
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000673/ScoringFiles/PGS000673.txt.gz - Check Terms/Licenses
PGS001112
(GBE_BIN_FC1006154)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Aspirin aspirin use measurement 499
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001112/ScoringFiles/PGS001112.txt.gz
PGS001113
(GBE_BIN_FC7006154)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Aspirin use self-reported aspirin use measurement 790
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001113/ScoringFiles/PGS001113.txt.gz
PGS000037
(PGS_AST)
 PGP000025 |
Belsky DW et al. Lancet Respir Med (2013)
 Asthma asthma 15
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000037/ScoringFiles/PGS000037.txt.gz
PGS000799
(GRSw_TAGC)
 PGP000189 |
Dijk FN et al. J Allergy Clin Immunol (2019)
 Asthma asthma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000799/ScoringFiles/PGS000799.txt.gz
PGS001341
(GBE_HC382)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Asthma asthma 6,430
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001341/ScoringFiles/PGS001341.txt.gz
PGS001782
(1kgeur_gbmi_Asthma_pst_eff_a1_b0.5_phiauto)
 PGP000262 |
Wang Y et al. Cell Genom (2023)
 Asthma asthma 884,043
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001782/ScoringFiles/PGS001782.txt.gz
PGS001787
(1kgeur_gbmi_leaveUKBBout_Asthma_pst_eff_a1_b0.5_phiauto)
 PGP000262 |
Wang Y et al. Cell Genom (2023)
 Asthma asthma 909,990
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001787/ScoringFiles/PGS001787.txt.gz
PGS001849
(portability-PLR_495)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Asthma asthma 22,679
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001849/ScoringFiles/PGS001849.txt.gz
PGS002061
(portability-ldpred2_495)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Asthma asthma 793,375
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002061/ScoringFiles/PGS002061.txt.gz
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