Polygenic Score (PGS) ID: PGS005122

Predicted Trait
Reported Trait Asthma
Mapped Trait(s) asthma (MONDO_0004979)
Released in PGS Catalog: Feb. 4, 2025
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Score Details

Score Construction
PGS Name forAFR_fromAMR
Development Method
Name PRS-CSx
Parameters NR
Variants
Original Genome Build GRCh37
Number of Variants 965,078
Effect Weight Type beta
PGS Source
PGS Catalog Publication (PGP) ID PGP000703
Citation (link to publication) Tsuo K et al. Cell Genom (2022)
Ancestry Distribution
Source of Variant
Associations (GWAS)
Hispanic or Latin American: 100%
18,173 individuals (100%)
PGS Evaluation
African: 100%
1 Sample Sets

Development Samples

Source of Variant Associations (GWAS)
Study Identifiers Sample Numbers Sample Ancestry Cohort(s)
—
[
  • 4,069 cases
  • , 14,104 controls
]
 Hispanic or Latin American BioMe, CCPM, UCLA, UKB

Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

PGS Performance
Metric ID (PPM) 		PGS Sample Set ID
(PSS) 		Performance Source Trait PGS Effect Sizes
(per SD change) 		Classification Metrics Other Metrics Covariates Included in the Model PGS Performance:
Other Relevant Information
PPM022342 PSS011916|
African Ancestry|
6,039 individuals
 PGP000703 |
Tsuo K et al. Cell Genom (2022)
 Reported Trait: Asthma — — R²: 0.01355 age, sex, 20 genetic principal components —

Evaluated Samples

PGS Sample Set ID
(PSS) 		Phenotype Definitions and Methods Participant Follow-up Time Sample Numbers Age of Study Participants Sample Ancestry Additional Ancestry Description Cohort(s) Additional Sample/Cohort Information
PSS011916 — —
[
  • 849 cases
  • , 5,190 controls
]
 — African unspecified — UKB —