Experimental Factor Ontology (EFO) Information | |
Identifier | EFO_0004995 |
Description | The weight of all organs and tissue in an individual less the weight of the individual's body fat. | Trait category |
Other measurement
|
Mapped terms |
2 mapped terms
|
Polygenic Score ID & Name | PGS Publication ID (PGP) | Reported Trait | Mapped Trait(s) (Ontology) | Number of Variants | Ancestry distribution | Scoring File (FTP Link) |
---|---|---|---|---|---|---|
PGS001165 (GBE_INI23125) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Arm fat free mass (L) | lean body mass | 30,360 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001165/ScoringFiles/PGS001165.txt.gz |
PGS001166 (GBE_INI23117) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Leg fat free mass (L) | lean body mass | 30,340 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001166/ScoringFiles/PGS001166.txt.gz |
PGS001167 (GBE_INI23113) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Leg fat-free mass (R) | lean body mass | 32,046 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001167/ScoringFiles/PGS001167.txt.gz |
PGS001168 (GBE_INI23129) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Trunk fat free mass | lean body mass | 34,749 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001168/ScoringFiles/PGS001168.txt.gz |
PGS001169 (GBE_INI23101) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Whole body fat free mass | lean body mass | 34,486 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001169/ScoringFiles/PGS001169.txt.gz |
PGS001950 (portability-PLR_log_fat_free_mass) |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Whole body fat-free mass | lean body mass | 128,827 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001950/ScoringFiles/PGS001950.txt.gz |
PGS002168 (portability-ldpred2_log_fat_free_mass) |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Whole body fat-free mass | lean body mass | 966,825 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002168/ScoringFiles/PGS002168.txt.gz |
PGS003531 (cont-decay-log_fat_free_mass) |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Whole body fat-free mass | lean body mass | 979,739 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003531/ScoringFiles/PGS003531.txt.gz |
PGS Performance Metric ID (PPM) |
Evaluated Score |
PGS Sample Set ID (PSS) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
Classification Metrics | Other Metrics | Covariates Included in the Model |
PGS Performance: Other Relevant Information |
---|---|---|---|---|---|---|---|---|---|
PPM008548 | PGS001165 (GBE_INI23125) |
PSS005154| South Asian Ancestry| 7,647 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Arm fat-free mass (L) | — | — | R²: 0.66424 [0.65212, 0.67635] Incremental R2 (full-covars): 0.03058 PGS R2 (no covariates): 0.02351 [0.01688, 0.03014] |
age, sex, UKB array type, Genotype PCs | — |
PPM008545 | PGS001165 (GBE_INI23125) |
PSS005151| African Ancestry| 6,299 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Arm fat-free mass (L) | — | — | R²: 0.5894 [0.57408, 0.60472] Incremental R2 (full-covars): 0.00951 PGS R2 (no covariates): 0.01764 [0.0113, 0.02399] |
age, sex, UKB array type, Genotype PCs | — |
PPM008546 | PGS001165 (GBE_INI23125) |
PSS005152| East Asian Ancestry| 1,678 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Arm fat-free mass (L) | — | — | R²: 0.74448 [0.72359, 0.76538] Incremental R2 (full-covars): 0.0034 PGS R2 (no covariates): 0.01331 [0.00252, 0.0241] |
age, sex, UKB array type, Genotype PCs | — |
PPM008547 | PGS001165 (GBE_INI23125) |
PSS005153| European Ancestry| 24,457 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Arm fat-free mass (L) | — | — | R²: 0.73779 [0.7322, 0.74339] Incremental R2 (full-covars): 0.03937 PGS R2 (no covariates): 0.0417 [0.03684, 0.04656] |
age, sex, UKB array type, Genotype PCs | — |
PPM008549 | PGS001165 (GBE_INI23125) |
PSS005155| European Ancestry| 66,234 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Arm fat-free mass (L) | — | — | R²: 0.73264 [0.72918, 0.73609] Incremental R2 (full-covars): 0.04461 PGS R2 (no covariates): 0.04544 [0.04237, 0.04851] |
age, sex, UKB array type, Genotype PCs | — |
PPM008550 | PGS001166 (GBE_INI23117) |
PSS005111| African Ancestry| 6,303 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Leg fat-free mass (L) | — | — | R²: 0.53187 [0.51528, 0.54846] Incremental R2 (full-covars): 0.00841 PGS R2 (no covariates): 0.0152 [0.0093, 0.0211] |
age, sex, UKB array type, Genotype PCs | — |
PPM008551 | PGS001166 (GBE_INI23117) |
PSS005112| East Asian Ancestry| 1,679 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Leg fat-free mass (L) | — | — | R²: 0.72443 [0.7022, 0.74666] Incremental R2 (full-covars): 0.00342 PGS R2 (no covariates): 0.01608 [0.00425, 0.0279] |
age, sex, UKB array type, Genotype PCs | — |
PPM008552 | PGS001166 (GBE_INI23117) |
PSS005113| European Ancestry| 24,461 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Leg fat-free mass (L) | — | — | R²: 0.7007 [0.69448, 0.70692] Incremental R2 (full-covars): 0.0443 PGS R2 (no covariates): 0.0464 [0.0413, 0.0515] |
age, sex, UKB array type, Genotype PCs | — |
PPM008553 | PGS001166 (GBE_INI23117) |
PSS005114| South Asian Ancestry| 7,649 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Leg fat-free mass (L) | — | — | R²: 0.65024 [0.63775, 0.66272] Incremental R2 (full-covars): 0.03375 PGS R2 (no covariates): 0.0265 [0.01948, 0.03352] |
age, sex, UKB array type, Genotype PCs | — |
PPM008554 | PGS001166 (GBE_INI23117) |
PSS005115| European Ancestry| 66,253 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Leg fat-free mass (L) | — | — | R²: 0.69394 [0.69009, 0.69779] Incremental R2 (full-covars): 0.05093 PGS R2 (no covariates): 0.05064 [0.04742, 0.05387] |
age, sex, UKB array type, Genotype PCs | — |
PPM008555 | PGS001167 (GBE_INI23113) |
PSS005096| African Ancestry| 6,305 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Leg fat-free mass (R) | — | — | R²: 0.53747 [0.52099, 0.55395] Incremental R2 (full-covars): 0.00943 PGS R2 (no covariates): 0.01562 [0.00964, 0.0216] |
age, sex, UKB array type, Genotype PCs | — |
PPM008556 | PGS001167 (GBE_INI23113) |
PSS005097| East Asian Ancestry| 1,680 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Leg fat-free mass (R) | — | — | R²: 0.72975 [0.70788, 0.75163] Incremental R2 (full-covars): 0.00171 PGS R2 (no covariates): 0.01431 [0.00314, 0.02549] |
age, sex, UKB array type, Genotype PCs | — |
PPM008557 | PGS001167 (GBE_INI23113) |
PSS005098| European Ancestry| 24,461 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Leg fat-free mass (R) | — | — | R²: 0.70588 [0.69974, 0.71201] Incremental R2 (full-covars): 0.04477 PGS R2 (no covariates): 0.0455 [0.04045, 0.05056] |
age, sex, UKB array type, Genotype PCs | — |
PPM008558 | PGS001167 (GBE_INI23113) |
PSS005099| South Asian Ancestry| 7,649 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Leg fat-free mass (R) | — | — | R²: 0.65682 [0.64451, 0.66914] Incremental R2 (full-covars): 0.03381 PGS R2 (no covariates): 0.02711 [0.02002, 0.0342] |
age, sex, UKB array type, Genotype PCs | — |
PPM008559 | PGS001167 (GBE_INI23113) |
PSS005100| European Ancestry| 66,257 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Leg fat-free mass (R) | — | — | R²: 0.69994 [0.69615, 0.70373] Incremental R2 (full-covars): 0.05103 PGS R2 (no covariates): 0.04961 [0.04641, 0.0528] |
age, sex, UKB array type, Genotype PCs | — |
PPM008560 | PGS001168 (GBE_INI23129) |
PSS005171| African Ancestry| 6,298 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Trunk fat-free mass | — | — | R²: 0.59642 [0.58127, 0.61157] Incremental R2 (full-covars): 0.01057 PGS R2 (no covariates): 0.0178 [0.01143, 0.02418] |
age, sex, UKB array type, Genotype PCs | — |
PPM008561 | PGS001168 (GBE_INI23129) |
PSS005172| East Asian Ancestry| 1,677 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Trunk fat-free mass | — | — | R²: 0.73696 [0.71556, 0.75835] Incremental R2 (full-covars): 0.01146 PGS R2 (no covariates): 0.0221 [0.00833, 0.03588] |
age, sex, UKB array type, Genotype PCs | — |
PPM008562 | PGS001168 (GBE_INI23129) |
PSS005173| European Ancestry| 24,445 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Trunk fat-free mass | — | — | R²: 0.76298 [0.75784, 0.76812] Incremental R2 (full-covars): 0.04792 PGS R2 (no covariates): 0.04719 [0.04205, 0.05233] |
age, sex, UKB array type, Genotype PCs | — |
PPM008563 | PGS001168 (GBE_INI23129) |
PSS005174| South Asian Ancestry| 7,645 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Trunk fat-free mass | — | — | R²: 0.69077 [0.67939, 0.70215] Incremental R2 (full-covars): 0.03748 PGS R2 (no covariates): 0.03123 [0.02365, 0.03881] |
age, sex, UKB array type, Genotype PCs | — |
PPM008564 | PGS001168 (GBE_INI23129) |
PSS005175| European Ancestry| 66,210 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Trunk fat-free mass | — | — | R²: 0.76832 [0.76525, 0.77138] Incremental R2 (full-covars): 0.05259 PGS R2 (no covariates): 0.05253 [0.04925, 0.05581] |
age, sex, UKB array type, Genotype PCs | — |
PPM008565 | PGS001169 (GBE_INI23101) |
PSS005046| African Ancestry| 6,304 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | R²: 0.60157 [0.58655, 0.61659] Incremental R2 (full-covars): 0.01013 PGS R2 (no covariates): 0.01873 [0.0122, 0.02526] |
age, sex, UKB array type, Genotype PCs | — |
PPM008566 | PGS001169 (GBE_INI23101) |
PSS005047| East Asian Ancestry| 1,680 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | R²: 0.75252 [0.73217, 0.77286] Incremental R2 (full-covars): 0.00794 PGS R2 (no covariates): 0.01884 [0.00608, 0.03161] |
age, sex, UKB array type, Genotype PCs | — |
PPM008567 | PGS001169 (GBE_INI23101) |
PSS005048| European Ancestry| 24,463 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | R²: 0.75918 [0.75397, 0.76439] Incremental R2 (full-covars): 0.04637 PGS R2 (no covariates): 0.04707 [0.04193, 0.0522] |
age, sex, UKB array type, Genotype PCs | — |
PPM008568 | PGS001169 (GBE_INI23101) |
PSS005049| South Asian Ancestry| 7,649 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | R²: 0.69559 [0.68435, 0.70683] Incremental R2 (full-covars): 0.03597 PGS R2 (no covariates): 0.02818 [0.02096, 0.03541] |
age, sex, UKB array type, Genotype PCs | — |
PPM008569 | PGS001169 (GBE_INI23101) |
PSS005050| European Ancestry| 66,262 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | R²: 0.76094 [0.75779, 0.76409] Incremental R2 (full-covars): 0.05193 PGS R2 (no covariates): 0.05222 [0.04895, 0.05548] |
age, sex, UKB array type, Genotype PCs | — |
PPM010476 | PGS001950 (portability-PLR_log_fat_free_mass) |
PSS009217| European Ancestry| 4,072 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | Partial Correlation (partial-r): 0.449 [0.424, 0.4732] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010477 | PGS001950 (portability-PLR_log_fat_free_mass) |
PSS008771| European Ancestry| 6,538 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | Partial Correlation (partial-r): 0.4291 [0.4091, 0.4487] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010478 | PGS001950 (portability-PLR_log_fat_free_mass) |
PSS008545| Greater Middle Eastern Ancestry| 1,152 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | Partial Correlation (partial-r): 0.3709 [0.3195, 0.42] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010479 | PGS001950 (portability-PLR_log_fat_free_mass) |
PSS008323| South Asian Ancestry| 6,185 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | Partial Correlation (partial-r): 0.3879 [0.3665, 0.4089] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010480 | PGS001950 (portability-PLR_log_fat_free_mass) |
PSS008100| East Asian Ancestry| 1,782 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | Partial Correlation (partial-r): 0.3154 [0.2727, 0.3568] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010481 | PGS001950 (portability-PLR_log_fat_free_mass) |
PSS007887| African Ancestry| 2,420 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | Partial Correlation (partial-r): 0.2517 [0.2139, 0.2888] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010482 | PGS001950 (portability-PLR_log_fat_free_mass) |
PSS008991| African Ancestry| 3,799 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | Partial Correlation (partial-r): 0.1941 [0.1633, 0.2246] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010475 | PGS001950 (portability-PLR_log_fat_free_mass) |
PSS009443| European Ancestry| 19,637 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | Partial Correlation (partial-r): 0.458 [0.4469, 0.469] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM012191 | PGS002168 (portability-ldpred2_log_fat_free_mass) |
PSS009443| European Ancestry| 19,637 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | Partial Correlation (partial-r): 0.447 [0.4358, 0.4581] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM012192 | PGS002168 (portability-ldpred2_log_fat_free_mass) |
PSS009217| European Ancestry| 4,072 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | Partial Correlation (partial-r): 0.4493 [0.4244, 0.4735] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM012193 | PGS002168 (portability-ldpred2_log_fat_free_mass) |
PSS008771| European Ancestry| 6,538 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | Partial Correlation (partial-r): 0.4231 [0.4029, 0.4428] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM012194 | PGS002168 (portability-ldpred2_log_fat_free_mass) |
PSS008545| Greater Middle Eastern Ancestry| 1,152 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | Partial Correlation (partial-r): 0.3653 [0.3138, 0.4148] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM012195 | PGS002168 (portability-ldpred2_log_fat_free_mass) |
PSS008323| South Asian Ancestry| 6,185 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | Partial Correlation (partial-r): 0.3787 [0.3571, 0.3999] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM012196 | PGS002168 (portability-ldpred2_log_fat_free_mass) |
PSS008100| East Asian Ancestry| 1,782 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | Partial Correlation (partial-r): 0.3169 [0.2743, 0.3583] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM012197 | PGS002168 (portability-ldpred2_log_fat_free_mass) |
PSS007887| African Ancestry| 2,420 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | Partial Correlation (partial-r): 0.2494 [0.2115, 0.2866] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM012198 | PGS002168 (portability-ldpred2_log_fat_free_mass) |
PSS008991| African Ancestry| 3,799 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Whole body fat-free mass | — | — | Partial Correlation (partial-r): 0.1911 [0.1602, 0.2216] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM017459 | PGS003531 (cont-decay-log_fat_free_mass) |
PSS010895| European Ancestry| 19,661 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Whole body fat-free mass | — | — | partial-R2: 0.2 | sex, age, deprivation index, PC1-16 | — |
PPM017543 | PGS003531 (cont-decay-log_fat_free_mass) |
PSS010811| European Ancestry| 4,062 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Whole body fat-free mass | — | — | partial-R2: 0.2 | sex, age, deprivation index, PC1-16 | — |
PPM017627 | PGS003531 (cont-decay-log_fat_free_mass) |
PSS010643| European Ancestry| 6,376 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Whole body fat-free mass | — | — | partial-R2: 0.18 | sex, age, deprivation index, PC1-16 | — |
PPM017711 | PGS003531 (cont-decay-log_fat_free_mass) |
PSS010559| Greater Middle Eastern Ancestry| 1,124 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Whole body fat-free mass | — | — | partial-R2: 0.15 | sex, age, deprivation index, PC1-16 | — |
PPM017795 | PGS003531 (cont-decay-log_fat_free_mass) |
PSS010223| European Ancestry| 2,318 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Whole body fat-free mass | — | — | partial-R2: 0.19 | sex, age, deprivation index, PC1-16 | — |
PPM017879 | PGS003531 (cont-decay-log_fat_free_mass) |
PSS010475| South Asian Ancestry| 6,134 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Whole body fat-free mass | — | — | partial-R2: 0.15 | sex, age, deprivation index, PC1-16 | — |
PPM017963 | PGS003531 (cont-decay-log_fat_free_mass) |
PSS010391| East Asian Ancestry| 1,770 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Whole body fat-free mass | — | — | partial-R2: 0.09 | sex, age, deprivation index, PC1-16 | — |
PPM018047 | PGS003531 (cont-decay-log_fat_free_mass) |
PSS010307| African Ancestry| 2,408 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Whole body fat-free mass | — | — | partial-R2: 0.07 | sex, age, deprivation index, PC1-16 | — |
PPM018131 | PGS003531 (cont-decay-log_fat_free_mass) |
PSS010727| African Ancestry| 3,771 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Whole body fat-free mass | — | — | partial-R2: 0.03 | sex, age, deprivation index, PC1-16 | — |
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
---|---|---|---|---|---|---|---|---|
PSS007887 | — | — | 2,420 individuals | — | African American or Afro-Caribbean | Carribean | UKB | — |
PSS008545 | — | — | 1,152 individuals | — | Greater Middle Eastern (Middle Eastern, North African or Persian) | Iran (Middle East) | UKB | — |
PSS005046 | — | — | 6,304 individuals | — | African unspecified | — | UKB | — |
PSS009443 | — | — | 19,637 individuals | — | European | UK (+ Ireland) | UKB | — |
PSS010811 | — | — | 4,062 individuals, 38.0 % Male samples |
Mean = 54.3 years Sd = 7.5 years |
European | Polish | UKB | — |
PSS010559 | — | — | 1,124 individuals, 60.0 % Male samples |
Mean = 52.0 years Sd = 7.9 years |
Greater Middle Eastern (Middle Eastern, North African or Persian) | Iranian | UKB | — |
PSS005047 | — | — | 1,680 individuals | — | East Asian | — | UKB | — |
PSS010307 | — | — | 2,408 individuals, 36.0 % Male samples |
Mean = 52.5 years Sd = 8.1 years |
African American or Afro-Caribbean | Caribbean | UKB | — |
PSS005096 | — | — | 6,305 individuals | — | African unspecified | — | UKB | — |
PSS005097 | — | — | 1,680 individuals | — | East Asian | — | UKB | — |
PSS005098 | — | — | 24,461 individuals | — | European | non-white British ancestry | UKB | — |
PSS005099 | — | — | 7,649 individuals | — | South Asian | — | UKB | — |
PSS005100 | — | — | 66,257 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
PSS005111 | — | — | 6,303 individuals | — | African unspecified | — | UKB | — |
PSS005112 | — | — | 1,679 individuals | — | East Asian | — | UKB | — |
PSS005113 | — | — | 24,461 individuals | — | European | non-white British ancestry | UKB | — |
PSS005114 | — | — | 7,649 individuals | — | South Asian | — | UKB | — |
PSS005115 | — | — | 66,253 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
PSS009217 | — | — | 4,072 individuals | — | European | Poland (NE Europe) | UKB | — |
PSS008323 | — | — | 6,185 individuals | — | South Asian | India (South Asia) | UKB | — |
PSS010727 | — | — | 3,771 individuals, 46.0 % Male samples |
Mean = 51.9 years Sd = 8.1 years |
African unspecified | Nigerian | UKB | — |
PSS010475 | — | — | 6,134 individuals, 54.0 % Male samples |
Mean = 53.3 years Sd = 8.4 years |
South Asian | Indian | UKB | — |
PSS010223 | — | — | 2,318 individuals, 45.0 % Male samples |
Mean = 58.0 years Sd = 7.1 years |
European | Ashkenazi | UKB | — |
PSS008991 | — | — | 3,799 individuals | — | African unspecified | Nigeria (West Africa) | UKB | — |
PSS008100 | — | — | 1,782 individuals | — | East Asian | China (East Asia) | UKB | — |
PSS005151 | — | — | 6,299 individuals | — | African unspecified | — | UKB | — |
PSS005152 | — | — | 1,678 individuals | — | East Asian | — | UKB | — |
PSS005153 | — | — | 24,457 individuals | — | European | non-white British ancestry | UKB | — |
PSS005154 | — | — | 7,647 individuals | — | South Asian | — | UKB | — |
PSS005155 | — | — | 66,234 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
PSS010391 | — | — | 1,770 individuals, 34.0 % Male samples |
Mean = 52.4 years Sd = 7.7 years |
East Asian | Chinese | UKB | — |
PSS010895 | — | — | 19,661 individuals, 46.0 % Male samples |
Mean = 56.9 years Sd = 7.9 years |
European | white British | UKB | — |
PSS010643 | — | — | 6,376 individuals, 45.0 % Male samples |
Mean = 54.5 years Sd = 8.4 years |
European | Italian | UKB | — |
PSS005171 | — | — | 6,298 individuals | — | African unspecified | — | UKB | — |
PSS005172 | — | — | 1,677 individuals | — | East Asian | — | UKB | — |
PSS005173 | — | — | 24,445 individuals | — | European | non-white British ancestry | UKB | — |
PSS005174 | — | — | 7,645 individuals | — | South Asian | — | UKB | — |
PSS005175 | — | — | 66,210 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
PSS005048 | — | — | 24,463 individuals | — | European | non-white British ancestry | UKB | — |
PSS005049 | — | — | 7,649 individuals | — | South Asian | — | UKB | — |
PSS005050 | — | — | 66,262 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
PSS008771 | — | — | 6,538 individuals | — | European | Italy (South Europe) | UKB | — |