Trait: lean body mass

Experimental Factor Ontology (EFO) Information
Identifier EFO_0004995
Description The weight of all organs and tissue in an individual less the weight of the individual's body fat.
Trait category
Other measurement
Mapped terms 2 mapped terms
  • NCIt:C71258
  • SNOMEDCT:248362003

Associated Polygenic Score(s)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution Scoring File (FTP Link)
PGS001165
(GBE_INI23125)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Arm fat free mass (L) lean body mass 30,360
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001165/ScoringFiles/PGS001165.txt.gz
PGS001166
(GBE_INI23117)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Leg fat free mass (L) lean body mass 30,340
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001166/ScoringFiles/PGS001166.txt.gz
PGS001167
(GBE_INI23113)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Leg fat-free mass (R) lean body mass 32,046
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001167/ScoringFiles/PGS001167.txt.gz
PGS001168
(GBE_INI23129)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Trunk fat free mass lean body mass 34,749
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001168/ScoringFiles/PGS001168.txt.gz
PGS001169
(GBE_INI23101)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Whole body fat free mass lean body mass 34,486
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001169/ScoringFiles/PGS001169.txt.gz
PGS001950
(portability-PLR_log_fat_free_mass)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Whole body fat-free mass lean body mass 128,827
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001950/ScoringFiles/PGS001950.txt.gz
PGS002168
(portability-ldpred2_log_fat_free_mass)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Whole body fat-free mass lean body mass 966,825
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002168/ScoringFiles/PGS002168.txt.gz
PGS003531
(cont-decay-log_fat_free_mass)
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Whole body fat-free mass lean body mass 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003531/ScoringFiles/PGS003531.txt.gz

Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

PGS Performance
Metric ID (PPM) 		Evaluated Score PGS Sample Set ID
(PSS) 		Performance Source Trait PGS Effect Sizes
(per SD change) 		Classification Metrics Other Metrics Covariates Included in the Model PGS Performance:
Other Relevant Information
PPM008548 PGS001165
(GBE_INI23125)
 PSS005154|
South Asian Ancestry|
7,647 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Arm fat-free mass (L) — — R²: 0.66424 [0.65212, 0.67635]
Incremental R2 (full-covars): 0.03058
PGS R2 (no covariates): 0.02351 [0.01688, 0.03014]		 age, sex, UKB array type, Genotype PCs —
PPM008545 PGS001165
(GBE_INI23125)
 PSS005151|
African Ancestry|
6,299 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Arm fat-free mass (L) — — R²: 0.5894 [0.57408, 0.60472]
Incremental R2 (full-covars): 0.00951
PGS R2 (no covariates): 0.01764 [0.0113, 0.02399]		 age, sex, UKB array type, Genotype PCs —
PPM008546 PGS001165
(GBE_INI23125)
 PSS005152|
East Asian Ancestry|
1,678 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Arm fat-free mass (L) — — R²: 0.74448 [0.72359, 0.76538]
Incremental R2 (full-covars): 0.0034
PGS R2 (no covariates): 0.01331 [0.00252, 0.0241]		 age, sex, UKB array type, Genotype PCs —
PPM008547 PGS001165
(GBE_INI23125)
 PSS005153|
European Ancestry|
24,457 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Arm fat-free mass (L) — — R²: 0.73779 [0.7322, 0.74339]
Incremental R2 (full-covars): 0.03937
PGS R2 (no covariates): 0.0417 [0.03684, 0.04656]		 age, sex, UKB array type, Genotype PCs —
PPM008549 PGS001165
(GBE_INI23125)
 PSS005155|
European Ancestry|
66,234 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Arm fat-free mass (L) — — R²: 0.73264 [0.72918, 0.73609]
Incremental R2 (full-covars): 0.04461
PGS R2 (no covariates): 0.04544 [0.04237, 0.04851]		 age, sex, UKB array type, Genotype PCs —
PPM008550 PGS001166
(GBE_INI23117)
 PSS005111|
African Ancestry|
6,303 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Leg fat-free mass (L) — — R²: 0.53187 [0.51528, 0.54846]
Incremental R2 (full-covars): 0.00841
PGS R2 (no covariates): 0.0152 [0.0093, 0.0211]		 age, sex, UKB array type, Genotype PCs —
PPM008551 PGS001166
(GBE_INI23117)
 PSS005112|
East Asian Ancestry|
1,679 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Leg fat-free mass (L) — — R²: 0.72443 [0.7022, 0.74666]
Incremental R2 (full-covars): 0.00342
PGS R2 (no covariates): 0.01608 [0.00425, 0.0279]		 age, sex, UKB array type, Genotype PCs —
PPM008552 PGS001166
(GBE_INI23117)
 PSS005113|
European Ancestry|
24,461 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Leg fat-free mass (L) — — R²: 0.7007 [0.69448, 0.70692]
Incremental R2 (full-covars): 0.0443
PGS R2 (no covariates): 0.0464 [0.0413, 0.0515]		 age, sex, UKB array type, Genotype PCs —
PPM008553 PGS001166
(GBE_INI23117)
 PSS005114|
South Asian Ancestry|
7,649 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Leg fat-free mass (L) — — R²: 0.65024 [0.63775, 0.66272]
Incremental R2 (full-covars): 0.03375
PGS R2 (no covariates): 0.0265 [0.01948, 0.03352]		 age, sex, UKB array type, Genotype PCs —
PPM008554 PGS001166
(GBE_INI23117)
 PSS005115|
European Ancestry|
66,253 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Leg fat-free mass (L) — — R²: 0.69394 [0.69009, 0.69779]
Incremental R2 (full-covars): 0.05093
PGS R2 (no covariates): 0.05064 [0.04742, 0.05387]		 age, sex, UKB array type, Genotype PCs —
PPM008555 PGS001167
(GBE_INI23113)
 PSS005096|
African Ancestry|
6,305 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Leg fat-free mass (R) — — R²: 0.53747 [0.52099, 0.55395]
Incremental R2 (full-covars): 0.00943
PGS R2 (no covariates): 0.01562 [0.00964, 0.0216]		 age, sex, UKB array type, Genotype PCs —
PPM008556 PGS001167
(GBE_INI23113)
 PSS005097|
East Asian Ancestry|
1,680 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Leg fat-free mass (R) — — R²: 0.72975 [0.70788, 0.75163]
Incremental R2 (full-covars): 0.00171
PGS R2 (no covariates): 0.01431 [0.00314, 0.02549]		 age, sex, UKB array type, Genotype PCs —
PPM008557 PGS001167
(GBE_INI23113)
 PSS005098|
European Ancestry|
24,461 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Leg fat-free mass (R) — — R²: 0.70588 [0.69974, 0.71201]
Incremental R2 (full-covars): 0.04477
PGS R2 (no covariates): 0.0455 [0.04045, 0.05056]		 age, sex, UKB array type, Genotype PCs —
PPM008558 PGS001167
(GBE_INI23113)
 PSS005099|
South Asian Ancestry|
7,649 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Leg fat-free mass (R) — — R²: 0.65682 [0.64451, 0.66914]
Incremental R2 (full-covars): 0.03381
PGS R2 (no covariates): 0.02711 [0.02002, 0.0342]		 age, sex, UKB array type, Genotype PCs —
PPM008559 PGS001167
(GBE_INI23113)
 PSS005100|
European Ancestry|
66,257 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Leg fat-free mass (R) — — R²: 0.69994 [0.69615, 0.70373]
Incremental R2 (full-covars): 0.05103
PGS R2 (no covariates): 0.04961 [0.04641, 0.0528]		 age, sex, UKB array type, Genotype PCs —
PPM008560 PGS001168
(GBE_INI23129)
 PSS005171|
African Ancestry|
6,298 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Trunk fat-free mass — — R²: 0.59642 [0.58127, 0.61157]
Incremental R2 (full-covars): 0.01057
PGS R2 (no covariates): 0.0178 [0.01143, 0.02418]		 age, sex, UKB array type, Genotype PCs —
PPM008561 PGS001168
(GBE_INI23129)
 PSS005172|
East Asian Ancestry|
1,677 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Trunk fat-free mass — — R²: 0.73696 [0.71556, 0.75835]
Incremental R2 (full-covars): 0.01146
PGS R2 (no covariates): 0.0221 [0.00833, 0.03588]		 age, sex, UKB array type, Genotype PCs —
PPM008562 PGS001168
(GBE_INI23129)
 PSS005173|
European Ancestry|
24,445 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Trunk fat-free mass — — R²: 0.76298 [0.75784, 0.76812]
Incremental R2 (full-covars): 0.04792
PGS R2 (no covariates): 0.04719 [0.04205, 0.05233]		 age, sex, UKB array type, Genotype PCs —
PPM008563 PGS001168
(GBE_INI23129)
 PSS005174|
South Asian Ancestry|
7,645 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Trunk fat-free mass — — R²: 0.69077 [0.67939, 0.70215]
Incremental R2 (full-covars): 0.03748
PGS R2 (no covariates): 0.03123 [0.02365, 0.03881]		 age, sex, UKB array type, Genotype PCs —
PPM008564 PGS001168
(GBE_INI23129)
 PSS005175|
European Ancestry|
66,210 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Trunk fat-free mass — — R²: 0.76832 [0.76525, 0.77138]
Incremental R2 (full-covars): 0.05259
PGS R2 (no covariates): 0.05253 [0.04925, 0.05581]		 age, sex, UKB array type, Genotype PCs —
PPM008565 PGS001169
(GBE_INI23101)
 PSS005046|
African Ancestry|
6,304 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Whole body fat-free mass — — R²: 0.60157 [0.58655, 0.61659]
Incremental R2 (full-covars): 0.01013
PGS R2 (no covariates): 0.01873 [0.0122, 0.02526]		 age, sex, UKB array type, Genotype PCs —
PPM008566 PGS001169
(GBE_INI23101)
 PSS005047|
East Asian Ancestry|
1,680 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Whole body fat-free mass — — R²: 0.75252 [0.73217, 0.77286]
Incremental R2 (full-covars): 0.00794
PGS R2 (no covariates): 0.01884 [0.00608, 0.03161]		 age, sex, UKB array type, Genotype PCs —
PPM008567 PGS001169
(GBE_INI23101)
 PSS005048|
European Ancestry|
24,463 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Whole body fat-free mass — — R²: 0.75918 [0.75397, 0.76439]
Incremental R2 (full-covars): 0.04637
PGS R2 (no covariates): 0.04707 [0.04193, 0.0522]		 age, sex, UKB array type, Genotype PCs —
PPM008568 PGS001169
(GBE_INI23101)
 PSS005049|
South Asian Ancestry|
7,649 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Whole body fat-free mass — — R²: 0.69559 [0.68435, 0.70683]
Incremental R2 (full-covars): 0.03597
PGS R2 (no covariates): 0.02818 [0.02096, 0.03541]		 age, sex, UKB array type, Genotype PCs —
PPM008569 PGS001169
(GBE_INI23101)
 PSS005050|
European Ancestry|
66,262 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Whole body fat-free mass — — R²: 0.76094 [0.75779, 0.76409]
Incremental R2 (full-covars): 0.05193
PGS R2 (no covariates): 0.05222 [0.04895, 0.05548]		 age, sex, UKB array type, Genotype PCs —
PPM010476 PGS001950
(portability-PLR_log_fat_free_mass)
 PSS009217|
European Ancestry|
4,072 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Whole body fat-free mass — — Partial Correlation (partial-r): 0.449 [0.424, 0.4732] sex, age, birth date, deprivation index, 16 PCs —
PPM010477 PGS001950
(portability-PLR_log_fat_free_mass)
 PSS008771|
European Ancestry|
6,538 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Whole body fat-free mass — — Partial Correlation (partial-r): 0.4291 [0.4091, 0.4487] sex, age, birth date, deprivation index, 16 PCs —
PPM010478 PGS001950
(portability-PLR_log_fat_free_mass)
 PSS008545|
Greater Middle Eastern Ancestry|
1,152 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Whole body fat-free mass — — Partial Correlation (partial-r): 0.3709 [0.3195, 0.42] sex, age, birth date, deprivation index, 16 PCs —
PPM010479 PGS001950
(portability-PLR_log_fat_free_mass)
 PSS008323|
South Asian Ancestry|
6,185 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Whole body fat-free mass — — Partial Correlation (partial-r): 0.3879 [0.3665, 0.4089] sex, age, birth date, deprivation index, 16 PCs —
PPM010480 PGS001950
(portability-PLR_log_fat_free_mass)
 PSS008100|
East Asian Ancestry|
1,782 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Whole body fat-free mass — — Partial Correlation (partial-r): 0.3154 [0.2727, 0.3568] sex, age, birth date, deprivation index, 16 PCs —
PPM010481 PGS001950
(portability-PLR_log_fat_free_mass)
 PSS007887|
African Ancestry|
2,420 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Whole body fat-free mass — — Partial Correlation (partial-r): 0.2517 [0.2139, 0.2888] sex, age, birth date, deprivation index, 16 PCs —
PPM010482 PGS001950
(portability-PLR_log_fat_free_mass)
 PSS008991|
African Ancestry|
3,799 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Whole body fat-free mass — — Partial Correlation (partial-r): 0.1941 [0.1633, 0.2246] sex, age, birth date, deprivation index, 16 PCs —
PPM010475 PGS001950
(portability-PLR_log_fat_free_mass)
 PSS009443|
European Ancestry|
19,637 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Whole body fat-free mass — — Partial Correlation (partial-r): 0.458 [0.4469, 0.469] sex, age, birth date, deprivation index, 16 PCs —
PPM012191 PGS002168
(portability-ldpred2_log_fat_free_mass)
 PSS009443|
European Ancestry|
19,637 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Whole body fat-free mass — — Partial Correlation (partial-r): 0.447 [0.4358, 0.4581] sex, age, birth date, deprivation index, 16 PCs —
PPM012192 PGS002168
(portability-ldpred2_log_fat_free_mass)
 PSS009217|
European Ancestry|
4,072 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Whole body fat-free mass — — Partial Correlation (partial-r): 0.4493 [0.4244, 0.4735] sex, age, birth date, deprivation index, 16 PCs —
PPM012193 PGS002168
(portability-ldpred2_log_fat_free_mass)
 PSS008771|
European Ancestry|
6,538 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Whole body fat-free mass — — Partial Correlation (partial-r): 0.4231 [0.4029, 0.4428] sex, age, birth date, deprivation index, 16 PCs —
PPM012194 PGS002168
(portability-ldpred2_log_fat_free_mass)
 PSS008545|
Greater Middle Eastern Ancestry|
1,152 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Whole body fat-free mass — — Partial Correlation (partial-r): 0.3653 [0.3138, 0.4148] sex, age, birth date, deprivation index, 16 PCs —
PPM012195 PGS002168
(portability-ldpred2_log_fat_free_mass)
 PSS008323|
South Asian Ancestry|
6,185 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Whole body fat-free mass — — Partial Correlation (partial-r): 0.3787 [0.3571, 0.3999] sex, age, birth date, deprivation index, 16 PCs —
PPM012196 PGS002168
(portability-ldpred2_log_fat_free_mass)
 PSS008100|
East Asian Ancestry|
1,782 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Whole body fat-free mass — — Partial Correlation (partial-r): 0.3169 [0.2743, 0.3583] sex, age, birth date, deprivation index, 16 PCs —
PPM012197 PGS002168
(portability-ldpred2_log_fat_free_mass)
 PSS007887|
African Ancestry|
2,420 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Whole body fat-free mass — — Partial Correlation (partial-r): 0.2494 [0.2115, 0.2866] sex, age, birth date, deprivation index, 16 PCs —
PPM012198 PGS002168
(portability-ldpred2_log_fat_free_mass)
 PSS008991|
African Ancestry|
3,799 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Whole body fat-free mass — — Partial Correlation (partial-r): 0.1911 [0.1602, 0.2216] sex, age, birth date, deprivation index, 16 PCs —
PPM017459 PGS003531
(cont-decay-log_fat_free_mass)
 PSS010895|
European Ancestry|
19,661 individuals
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Reported Trait: Whole body fat-free mass — — partial-R2: 0.2 sex, age, deprivation index, PC1-16 —
PPM017543 PGS003531
(cont-decay-log_fat_free_mass)
 PSS010811|
European Ancestry|
4,062 individuals
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Reported Trait: Whole body fat-free mass — — partial-R2: 0.2 sex, age, deprivation index, PC1-16 —
PPM017627 PGS003531
(cont-decay-log_fat_free_mass)
 PSS010643|
European Ancestry|
6,376 individuals
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Reported Trait: Whole body fat-free mass — — partial-R2: 0.18 sex, age, deprivation index, PC1-16 —
PPM017711 PGS003531
(cont-decay-log_fat_free_mass)
 PSS010559|
Greater Middle Eastern Ancestry|
1,124 individuals
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Reported Trait: Whole body fat-free mass — — partial-R2: 0.15 sex, age, deprivation index, PC1-16 —
PPM017795 PGS003531
(cont-decay-log_fat_free_mass)
 PSS010223|
European Ancestry|
2,318 individuals
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Reported Trait: Whole body fat-free mass — — partial-R2: 0.19 sex, age, deprivation index, PC1-16 —
PPM017879 PGS003531
(cont-decay-log_fat_free_mass)
 PSS010475|
South Asian Ancestry|
6,134 individuals
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Reported Trait: Whole body fat-free mass — — partial-R2: 0.15 sex, age, deprivation index, PC1-16 —
PPM017963 PGS003531
(cont-decay-log_fat_free_mass)
 PSS010391|
East Asian Ancestry|
1,770 individuals
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Reported Trait: Whole body fat-free mass — — partial-R2: 0.09 sex, age, deprivation index, PC1-16 —
PPM018047 PGS003531
(cont-decay-log_fat_free_mass)
 PSS010307|
African Ancestry|
2,408 individuals
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Reported Trait: Whole body fat-free mass — — partial-R2: 0.07 sex, age, deprivation index, PC1-16 —
PPM018131 PGS003531
(cont-decay-log_fat_free_mass)
 PSS010727|
African Ancestry|
3,771 individuals
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Reported Trait: Whole body fat-free mass — — partial-R2: 0.03 sex, age, deprivation index, PC1-16 —

Evaluated Samples

PGS Sample Set ID
(PSS) 		Phenotype Definitions and Methods Participant Follow-up Time Sample Numbers Age of Study Participants Sample Ancestry Additional Ancestry Description Cohort(s) Additional Sample/Cohort Information
PSS007887 — — 2,420 individuals — African American or Afro-Caribbean Carribean UKB —
PSS008545 — — 1,152 individuals — Greater Middle Eastern (Middle Eastern, North African or Persian) Iran (Middle East) UKB —
PSS005046 — — 6,304 individuals — African unspecified — UKB —
PSS009443 — — 19,637 individuals — European UK (+ Ireland) UKB —
PSS010811 — — 4,062 individuals,
38.0 % Male samples
 Mean = 54.3 years
Sd = 7.5 years		 European Polish UKB —
PSS010559 — — 1,124 individuals,
60.0 % Male samples
 Mean = 52.0 years
Sd = 7.9 years		 Greater Middle Eastern (Middle Eastern, North African or Persian) Iranian UKB —
PSS005047 — — 1,680 individuals — East Asian — UKB —
PSS010307 — — 2,408 individuals,
36.0 % Male samples
 Mean = 52.5 years
Sd = 8.1 years		 African American or Afro-Caribbean Caribbean UKB —
PSS005096 — — 6,305 individuals — African unspecified — UKB —
PSS005097 — — 1,680 individuals — East Asian — UKB —
PSS005098 — — 24,461 individuals — European non-white British ancestry UKB —
PSS005099 — — 7,649 individuals — South Asian — UKB —
PSS005100 — — 66,257 individuals — European white British ancestry UKB Testing cohort (heldout set)
PSS005111 — — 6,303 individuals — African unspecified — UKB —
PSS005112 — — 1,679 individuals — East Asian — UKB —
PSS005113 — — 24,461 individuals — European non-white British ancestry UKB —
PSS005114 — — 7,649 individuals — South Asian — UKB —
PSS005115 — — 66,253 individuals — European white British ancestry UKB Testing cohort (heldout set)
PSS009217 — — 4,072 individuals — European Poland (NE Europe) UKB —
PSS008323 — — 6,185 individuals — South Asian India (South Asia) UKB —
PSS010727 — — 3,771 individuals,
46.0 % Male samples
 Mean = 51.9 years
Sd = 8.1 years		 African unspecified Nigerian UKB —
PSS010475 — — 6,134 individuals,
54.0 % Male samples
 Mean = 53.3 years
Sd = 8.4 years		 South Asian Indian UKB —
PSS010223 — — 2,318 individuals,
45.0 % Male samples
 Mean = 58.0 years
Sd = 7.1 years		 European Ashkenazi UKB —
PSS008991 — — 3,799 individuals — African unspecified Nigeria (West Africa) UKB —
PSS008100 — — 1,782 individuals — East Asian China (East Asia) UKB —
PSS005151 — — 6,299 individuals — African unspecified — UKB —
PSS005152 — — 1,678 individuals — East Asian — UKB —
PSS005153 — — 24,457 individuals — European non-white British ancestry UKB —
PSS005154 — — 7,647 individuals — South Asian — UKB —
PSS005155 — — 66,234 individuals — European white British ancestry UKB Testing cohort (heldout set)
PSS010391 — — 1,770 individuals,
34.0 % Male samples
 Mean = 52.4 years
Sd = 7.7 years		 East Asian Chinese UKB —
PSS010895 — — 19,661 individuals,
46.0 % Male samples
 Mean = 56.9 years
Sd = 7.9 years		 European white British UKB —
PSS010643 — — 6,376 individuals,
45.0 % Male samples
 Mean = 54.5 years
Sd = 8.4 years		 European Italian UKB —
PSS005171 — — 6,298 individuals — African unspecified — UKB —
PSS005172 — — 1,677 individuals — East Asian — UKB —
PSS005173 — — 24,445 individuals — European non-white British ancestry UKB —
PSS005174 — — 7,645 individuals — South Asian — UKB —
PSS005175 — — 66,210 individuals — European white British ancestry UKB Testing cohort (heldout set)
PSS005048 — — 24,463 individuals — European non-white British ancestry UKB —
PSS005049 — — 7,649 individuals — South Asian — UKB —
PSS005050 — — 66,262 individuals — European white British ancestry UKB Testing cohort (heldout set)
PSS008771 — — 6,538 individuals — European Italy (South Europe) UKB —