Experimental Factor Ontology (EFO) Information | |
Identifier | EFO_0007876 |
Description | quantification of insomnia such as how often it occurs and its severity | Trait category |
Other measurement
|
Polygenic Score ID & Name | PGS Publication ID (PGP) | Reported Trait | Mapped Trait(s) (Ontology) | Number of Variants | Ancestry distribution | Scoring File (FTP Link) |
---|---|---|---|---|---|---|
PGS003473 (LDPred2_Insomnia) |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Insomnia | insomnia measurement | 850,033 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003473/ScoringFiles/PGS003473.txt.gz |
PGS Performance Metric ID (PPM) |
Evaluated Score |
PGS Sample Set ID (PSS) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
Classification Metrics | Other Metrics | Covariates Included in the Model |
PGS Performance: Other Relevant Information |
---|---|---|---|---|---|---|---|---|---|
PPM017283 | PGS003473 (LDPred2_Insomnia) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Respiratory event index | β: 0.03 (0.01) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM017306 | PGS003473 (LDPred2_Insomnia) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Obstructive sleep apnea | β: 0.059 (0.024) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM017350 | PGS003473 (LDPred2_Insomnia) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Respiratory event index in obsese | β: 0.016 (0.017) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM017351 | PGS003473 (LDPred2_Insomnia) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Respiratory event index in non-obsese | β: 0.044 (0.012) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM017370 | PGS003473 (LDPred2_Insomnia) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Obstructive sleep apnea in obsese | β: 0.044 (0.034) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM017371 | PGS003473 (LDPred2_Insomnia) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Obstructive sleep apnea in non-obsese | β: 0.083 (0.034) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM017397 | PGS003473 (LDPred2_Insomnia) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Respiratory event index x obesity interaction | β: -0.035 (0.966) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM017407 | PGS003473 (LDPred2_Insomnia) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Obstructive sleep apnea x obesity interaction | β: 0.95 (0.05) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
---|---|---|---|---|---|---|---|---|
PSS010185 | — | — | 1,115 individuals, 41.1 % Male samples |
Mean = 46.18 years | Hispanic or Latin American | — | HCHS, SOL | — |