Trait: urinary microalbumin measurement

Experimental Factor Ontology (EFO) Information
Identifier EFO_0010967
Description
  • The quantification of microalbumin in urine.
Trait category
Other measurement
Mapped term(s) PMID:33462484

Associated Polygenic Score(s)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
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Ancestry legend
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Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
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Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution PGS Scoring File (FTP Link)
PGS000690
(snpnet.Microalbumin_in_urine)
PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
Microalbumin in urine [mg/L] urinary microalbumin measurement 111
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http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000690/ScoringFiles/PGS000690.txt.gz - Check Terms/Licenses

Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

PGS Performance
Metric ID (PPM)
Evaluated Score PGS Sample Set ID
(PSS)
Performance Source Trait PGS Effect Sizes
(per SD change)
Classification Metrics Other Metrics Covariates Included in the Model PGS Performance:
Other Relevant Information
PPM001418 PGS000690
(snpnet.Microalbumin_in_urine)
PSS000724|
African Ancestry|
2,679 individuals
PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
Reported Trait: Microalbumin in urine [mg/L] : 0.02307
Spearman's ρ: 0.013
Age, sex, PCs(1-40)
PPM001453 PGS000690
(snpnet.Microalbumin_in_urine)
PSS000725|
East Asian Ancestry|
323 individuals
PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
Reported Trait: Microalbumin in urine [mg/L] : 0.00102
Spearman's ρ: 0.098
Age, sex, PCs(1-40)
PPM001488 PGS000690
(snpnet.Microalbumin_in_urine)
PSS000726|
European Ancestry|
7,133 individuals
PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
Reported Trait: Microalbumin in urine [mg/L] : 0.02086
Spearman's ρ: 0.023
Age, sex, PCs(1-40)
PPM001523 PGS000690
(snpnet.Microalbumin_in_urine)
PSS000727|
South Asian Ancestry|
2,560 individuals
PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
Reported Trait: Microalbumin in urine [mg/L] : 0.02677
Spearman's ρ: 0.053
Age, sex, PCs(1-40)
PPM001558 PGS000690
(snpnet.Microalbumin_in_urine)
PSS000728|
European Ancestry|
19,352 individuals
PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
Reported Trait: Microalbumin in urine [mg/L] : 0.02007
Spearman's ρ: 0.021
Age, sex, PCs(1-40)
PPM001594 PGS000690
(snpnet.Microalbumin_in_urine)
PSS000834|
European Ancestry|
1,998 individuals
PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
Reported Trait: Microalbumin in urine [mg/L] Spearman's ρ: 0.017 Age, sex

Evaluated Samples

PGS Sample Set ID
(PSS)
Phenotype Definitions and Methods Participant Follow-up Time Sample Numbers Age of Study Participants Sample Ancestry Additional Ancestry Description Cohort(s) Additional Sample/Cohort Information
PSS000724 2,679 individuals African unspecified UKB
PSS000725 323 individuals East Asian UKB
PSS000726 7,133 individuals European Non-British White UKB
PSS000727 2,560 individuals South Asian UKB
PSS000728 19,352 individuals European
(British)
UKB
PSS000834 1,998 individuals European Participants self-identifying as white MESA