Trait: vein disorder

Trait Information
Identifier MONDO_0004634
Description A disease involving the vein.
Trait category
Other trait
Synonyms 5 synonyms
  • disease of vein
  • disease or disorder of vein
  • disorder of vein
  • vein disease
  • vein disease or disorder
Child trait(s) 2 child traits

Associated Polygenic Score(s)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Note: This table shows PGS for child terms of "vein disorder" in the EFO hierarchy.
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000961
(GBE_HC987)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Phlebitis and thrombophlebitis (time-to-event) Thrombophlebitis,
phlebitis		 1,143
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000961/ScoringFiles/PGS000961.txt.gz
PGS001024
(GBE_HC61)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Hemorrhoid hemorrhoid 786
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001024/ScoringFiles/PGS001024.txt.gz
PGS001844
(portability-PLR_451)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Phlebitis and thrombophlebitis Thrombophlebitis,
phlebitis		 431
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001844/ScoringFiles/PGS001844.txt.gz
PGS001846
(portability-PLR_455)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Hemorrhoids hemorrhoid 5,434
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001846/ScoringFiles/PGS001846.txt.gz
PGS002056
(portability-ldpred2_451)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Phlebitis and thrombophlebitis Thrombophlebitis,
phlebitis		 114,679
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002056/ScoringFiles/PGS002056.txt.gz
PGS002058
(portability-ldpred2_455)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Hemorrhoids hemorrhoid 780,418
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002058/ScoringFiles/PGS002058.txt.gz
PGS004464
(disease.I84.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 I84 (Hemorrhoids) hemorrhoid 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004464/ScoringFiles/PGS004464.txt.gz
PGS004534
(meta.I84.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 I84 (Hemorrhoids) hemorrhoid 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004534/ScoringFiles/PGS004534.txt.gz
PGS004933
(hemorrhoid_LDpred2_combined)
 PGP000665 |
Moreno-Grau S et al. Human Genomics (2024)
 Hemorrhoid hemorrhoid 184,519
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004933/ScoringFiles/PGS004933.txt.gz

Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

PGS Performance
Metric ID (PPM) 		Evaluated Score PGS Sample Set ID
(PSS) 		Performance Source Trait PGS Effect Sizes
(per SD change) 		Classification Metrics Other Metrics Covariates Included in the Model PGS Performance:
Other Relevant Information
PPM007629 PGS000961
(GBE_HC987)
 PSS004756|
African Ancestry|
6,497 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: TTE phlebitis and thrombophlebitis — AUROC: 0.63235 [0.59259, 0.67211] R²: 0.02507
Incremental AUROC (full-covars): 0.00771
PGS R2 (no covariates): 0.00171
PGS AUROC (no covariates): 0.53507 [0.4917, 0.57844]		 age, sex, UKB array type, Genotype PCs Full Model & PGS R2 is estimated using Nagelkerke's method
PPM007630 PGS000961
(GBE_HC987)
 PSS004757|
East Asian Ancestry|
1,704 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: TTE phlebitis and thrombophlebitis — AUROC: 0.66631 [0.52571, 0.80691] R²: 0.04004
Incremental AUROC (full-covars): -0.006
PGS R2 (no covariates): 4e-05
PGS AUROC (no covariates): 0.50807 [0.37643, 0.63972]		 age, sex, UKB array type, Genotype PCs Full Model & PGS R2 is estimated using Nagelkerke's method
PPM007631 PGS000961
(GBE_HC987)
 PSS004758|
European Ancestry|
24,905 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: TTE phlebitis and thrombophlebitis — AUROC: 0.66949 [0.64981, 0.68916] R²: 0.04365
Incremental AUROC (full-covars): 0.03126
PGS R2 (no covariates): 0.01428
PGS AUROC (no covariates): 0.59647 [0.57489, 0.61804]		 age, sex, UKB array type, Genotype PCs Full Model & PGS R2 is estimated using Nagelkerke's method
PPM007632 PGS000961
(GBE_HC987)
 PSS004759|
South Asian Ancestry|
7,831 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: TTE phlebitis and thrombophlebitis — AUROC: 0.63064 [0.58623, 0.67504] R²: 0.02362
Incremental AUROC (full-covars): 0.00728
PGS R2 (no covariates): 0.0042
PGS AUROC (no covariates): 0.55251 [0.5057, 0.59933]		 age, sex, UKB array type, Genotype PCs Full Model & PGS R2 is estimated using Nagelkerke's method
PPM007633 PGS000961
(GBE_HC987)
 PSS004760|
European Ancestry|
67,425 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: TTE phlebitis and thrombophlebitis — AUROC: 0.64191 [0.63056, 0.65326] R²: 0.03444
Incremental AUROC (full-covars): 0.03745
PGS R2 (no covariates): 0.01698
PGS AUROC (no covariates): 0.58931 [0.57719, 0.60143]		 age, sex, UKB array type, Genotype PCs Full Model & PGS R2 is estimated using Nagelkerke's method
PPM007883 PGS001024
(GBE_HC61)
 PSS004541|
African Ancestry|
6,497 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Haemorrhoids / piles — AUROC: 0.57317 [0.5447, 0.60164] R²: 0.01288
Incremental AUROC (full-covars): -0.00092
PGS R2 (no covariates): 0.00035
PGS AUROC (no covariates): 0.50826 [0.48122, 0.53531]		 age, sex, UKB array type, Genotype PCs Full Model & PGS R2 is estimated using Nagelkerke's method
PPM007884 PGS001024
(GBE_HC61)
 PSS004542|
East Asian Ancestry|
1,704 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Haemorrhoids / piles — AUROC: 0.59643 [0.55346, 0.63941] R²: 0.02452
Incremental AUROC (full-covars): -0.00644
PGS R2 (no covariates): 0.00062
PGS AUROC (no covariates): 0.48158 [0.43444, 0.52871]		 age, sex, UKB array type, Genotype PCs Full Model & PGS R2 is estimated using Nagelkerke's method
PPM007885 PGS001024
(GBE_HC61)
 PSS004543|
European Ancestry|
24,905 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Haemorrhoids / piles — AUROC: 0.58423 [0.56992, 0.59855] R²: 0.01383
Incremental AUROC (full-covars): 0.00316
PGS R2 (no covariates): 0.00067
PGS AUROC (no covariates): 0.51671 [0.50198, 0.53143]		 age, sex, UKB array type, Genotype PCs Full Model & PGS R2 is estimated using Nagelkerke's method
PPM007886 PGS001024
(GBE_HC61)
 PSS004544|
South Asian Ancestry|
7,831 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Haemorrhoids / piles — AUROC: 0.59907 [0.57631, 0.62183] R²: 0.01861
Incremental AUROC (full-covars): -0.00302
PGS R2 (no covariates): 0.0
PGS AUROC (no covariates): 0.50215 [0.47847, 0.52583]		 age, sex, UKB array type, Genotype PCs Full Model & PGS R2 is estimated using Nagelkerke's method
PPM007887 PGS001024
(GBE_HC61)
 PSS004545|
European Ancestry|
67,425 individuals
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reported Trait: Haemorrhoids / piles — AUROC: 0.56311 [0.5545, 0.57173] R²: 0.00825
Incremental AUROC (full-covars): 0.00353
PGS R2 (no covariates): 0.00132
PGS AUROC (no covariates): 0.5223 [0.51348, 0.53112]		 age, sex, UKB array type, Genotype PCs Full Model & PGS R2 is estimated using Nagelkerke's method
PPM009642 PGS001844
(portability-PLR_451)
 PSS009319|
European Ancestry|
18,164 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Phlebitis and thrombophlebitis — — Partial Correlation (partial-r): 0.0525 [0.038, 0.067] sex, age, birth date, deprivation index, 16 PCs —
PPM009643 PGS001844
(portability-PLR_451)
 PSS009093|
European Ancestry|
3,734 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Phlebitis and thrombophlebitis — — Partial Correlation (partial-r): 0.068 [0.036, 0.1] sex, age, birth date, deprivation index, 16 PCs —
PPM009644 PGS001844
(portability-PLR_451)
 PSS008647|
European Ancestry|
6,014 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Phlebitis and thrombophlebitis — — Partial Correlation (partial-r): 0.0468 [0.0215, 0.072] sex, age, birth date, deprivation index, 16 PCs —
PPM009645 PGS001844
(portability-PLR_451)
 PSS008421|
Greater Middle Eastern Ancestry|
1,102 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Phlebitis and thrombophlebitis — — Partial Correlation (partial-r): 0.0855 [0.0261, 0.1444] sex, age, birth date, deprivation index, 16 PCs —
PPM009646 PGS001844
(portability-PLR_451)
 PSS008201|
South Asian Ancestry|
5,719 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Phlebitis and thrombophlebitis — — Partial Correlation (partial-r): 0.0329 [0.0069, 0.0588] sex, age, birth date, deprivation index, 16 PCs —
PPM009647 PGS001844
(portability-PLR_451)
 PSS007983|
East Asian Ancestry|
1,622 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Phlebitis and thrombophlebitis — — Partial Correlation (partial-r): -0.0182 [-0.0671, 0.0308] sex, age, birth date, deprivation index, 16 PCs —
PPM009648 PGS001844
(portability-PLR_451)
 PSS007766|
African Ancestry|
2,283 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Phlebitis and thrombophlebitis — — Partial Correlation (partial-r): 0.0073 [-0.0339, 0.0485] sex, age, birth date, deprivation index, 16 PCs —
PPM009649 PGS001844
(portability-PLR_451)
 PSS008870|
African Ancestry|
3,611 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Phlebitis and thrombophlebitis — — Partial Correlation (partial-r): -0.0032 [-0.0359, 0.0295] sex, age, birth date, deprivation index, 16 PCs —
PPM009658 PGS001846
(portability-PLR_455)
 PSS009321|
European Ancestry|
19,218 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Hemorrhoids — — Partial Correlation (partial-r): 0.0438 [0.0297, 0.0579] sex, age, birth date, deprivation index, 16 PCs —
PPM009659 PGS001846
(portability-PLR_455)
 PSS009095|
European Ancestry|
3,955 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Hemorrhoids — — Partial Correlation (partial-r): 0.03 [-0.0013, 0.0612] sex, age, birth date, deprivation index, 16 PCs —
PPM009660 PGS001846
(portability-PLR_455)
 PSS008649|
European Ancestry|
6,440 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Hemorrhoids — — Partial Correlation (partial-r): 0.0317 [0.0073, 0.0561] sex, age, birth date, deprivation index, 16 PCs —
PPM009661 PGS001846
(portability-PLR_455)
 PSS008423|
Greater Middle Eastern Ancestry|
1,179 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Hemorrhoids — — Partial Correlation (partial-r): 0.0421 [-0.0155, 0.0995] sex, age, birth date, deprivation index, 16 PCs —
PPM009662 PGS001846
(portability-PLR_455)
 PSS008203|
South Asian Ancestry|
6,161 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Hemorrhoids — — Partial Correlation (partial-r): 0.0213 [-0.0037, 0.0463] sex, age, birth date, deprivation index, 16 PCs —
PPM009663 PGS001846
(portability-PLR_455)
 PSS007985|
East Asian Ancestry|
1,785 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Hemorrhoids — — Partial Correlation (partial-r): 0.0326 [-0.0141, 0.0791] sex, age, birth date, deprivation index, 16 PCs —
PPM009664 PGS001846
(portability-PLR_455)
 PSS007768|
African Ancestry|
2,423 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Hemorrhoids — — Partial Correlation (partial-r): -0.0211 [-0.061, 0.0189] sex, age, birth date, deprivation index, 16 PCs —
PPM009665 PGS001846
(portability-PLR_455)
 PSS008872|
African Ancestry|
3,828 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Hemorrhoids — — Partial Correlation (partial-r): 0.002 [-0.0298, 0.0337] sex, age, birth date, deprivation index, 16 PCs —
PPM011310 PGS002056
(portability-ldpred2_451)
 PSS009319|
European Ancestry|
18,164 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Phlebitis and thrombophlebitis — — Partial Correlation (partial-r): 0.0561 [0.0416, 0.0706] sex, age, birth date, deprivation index, 16 PCs —
PPM011311 PGS002056
(portability-ldpred2_451)
 PSS009093|
European Ancestry|
3,734 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Phlebitis and thrombophlebitis — — Partial Correlation (partial-r): 0.0729 [0.0408, 0.1048] sex, age, birth date, deprivation index, 16 PCs —
PPM011312 PGS002056
(portability-ldpred2_451)
 PSS008647|
European Ancestry|
6,014 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Phlebitis and thrombophlebitis — — Partial Correlation (partial-r): 0.0469 [0.0216, 0.0722] sex, age, birth date, deprivation index, 16 PCs —
PPM011313 PGS002056
(portability-ldpred2_451)
 PSS008421|
Greater Middle Eastern Ancestry|
1,102 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Phlebitis and thrombophlebitis — — Partial Correlation (partial-r): 0.085 [0.0256, 0.1439] sex, age, birth date, deprivation index, 16 PCs —
PPM011314 PGS002056
(portability-ldpred2_451)
 PSS008201|
South Asian Ancestry|
5,719 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Phlebitis and thrombophlebitis — — Partial Correlation (partial-r): 0.0284 [0.0025, 0.0543] sex, age, birth date, deprivation index, 16 PCs —
PPM011315 PGS002056
(portability-ldpred2_451)
 PSS007983|
East Asian Ancestry|
1,622 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Phlebitis and thrombophlebitis — — Partial Correlation (partial-r): -0.0188 [-0.0677, 0.0302] sex, age, birth date, deprivation index, 16 PCs —
PPM011316 PGS002056
(portability-ldpred2_451)
 PSS007766|
African Ancestry|
2,283 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Phlebitis and thrombophlebitis — — Partial Correlation (partial-r): -0.001 [-0.0422, 0.0402] sex, age, birth date, deprivation index, 16 PCs —
PPM011317 PGS002056
(portability-ldpred2_451)
 PSS008870|
African Ancestry|
3,611 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Phlebitis and thrombophlebitis — — Partial Correlation (partial-r): -0.0043 [-0.037, 0.0284] sex, age, birth date, deprivation index, 16 PCs —
PPM011326 PGS002058
(portability-ldpred2_455)
 PSS009321|
European Ancestry|
19,218 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Hemorrhoids — — Partial Correlation (partial-r): 0.0589 [0.0448, 0.073] sex, age, birth date, deprivation index, 16 PCs —
PPM011327 PGS002058
(portability-ldpred2_455)
 PSS009095|
European Ancestry|
3,955 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Hemorrhoids — — Partial Correlation (partial-r): 0.062 [0.0308, 0.0931] sex, age, birth date, deprivation index, 16 PCs —
PPM011328 PGS002058
(portability-ldpred2_455)
 PSS008649|
European Ancestry|
6,440 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Hemorrhoids — — Partial Correlation (partial-r): 0.0553 [0.0309, 0.0797] sex, age, birth date, deprivation index, 16 PCs —
PPM011329 PGS002058
(portability-ldpred2_455)
 PSS008423|
Greater Middle Eastern Ancestry|
1,179 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Hemorrhoids — — Partial Correlation (partial-r): -0.001 [-0.0586, 0.0565] sex, age, birth date, deprivation index, 16 PCs —
PPM011331 PGS002058
(portability-ldpred2_455)
 PSS007985|
East Asian Ancestry|
1,785 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Hemorrhoids — — Partial Correlation (partial-r): 0.0713 [0.0247, 0.1175] sex, age, birth date, deprivation index, 16 PCs —
PPM011332 PGS002058
(portability-ldpred2_455)
 PSS007768|
African Ancestry|
2,423 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Hemorrhoids — — Partial Correlation (partial-r): 0.0085 [-0.0315, 0.0485] sex, age, birth date, deprivation index, 16 PCs —
PPM011333 PGS002058
(portability-ldpred2_455)
 PSS008872|
African Ancestry|
3,828 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Hemorrhoids — — Partial Correlation (partial-r): 0.042 [0.0103, 0.0737] sex, age, birth date, deprivation index, 16 PCs —
PPM011330 PGS002058
(portability-ldpred2_455)
 PSS008203|
South Asian Ancestry|
6,161 individuals
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Reported Trait: Hemorrhoids — — Partial Correlation (partial-r): 0.057 [0.032, 0.0819] sex, age, birth date, deprivation index, 16 PCs —
PPM020579 PGS004464
(disease.I84.score)
 PSS011364|
European Ancestry|
56,192 individuals
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Reported Trait: I84 (Haemorrhoids) OR: 1.13492 — — — —
PPM020649 PGS004534
(meta.I84.score)
 PSS011364|
European Ancestry|
56,192 individuals
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Reported Trait: I84 (Haemorrhoids) OR: 1.15041 — — — —
PPM021721 PGS004933
(hemorrhoid_LDpred2_combined)
 PSS011762|
European Ancestry|
8,417 individuals
 PGP000665 |
Moreno-Grau S et al. Human Genomics (2024)
 Reported Trait: Hemorrhoid OR: 1.1 [1.04, 1.15] AUROC: 0.56 — — —

Evaluated Samples

PGS Sample Set ID
(PSS) 		Phenotype Definitions and Methods Participant Follow-up Time Sample Numbers Age of Study Participants Sample Ancestry Additional Ancestry Description Cohort(s) Additional Sample/Cohort Information
PSS004541 — —
[
  • 433 cases
  • , 6,064 controls
]
 — African unspecified — UKB —
PSS004542 — —
[
  • 164 cases
  • , 1,540 controls
]
 — East Asian — UKB —
PSS004543 — —
[
  • 1,580 cases
  • , 23,325 controls
]
 — European non-white British ancestry UKB —
PSS004544 — —
[
  • 609 cases
  • , 7,222 controls
]
 — South Asian — UKB —
PSS004545 — —
[
  • 4,471 cases
  • , 62,954 controls
]
 — European white British ancestry UKB Testing cohort (heldout set)
PSS008647 — — 6,014 individuals — European Italy (South Europe) UKB —
PSS008649 — — 6,440 individuals — European Italy (South Europe) UKB —
PSS007766 — — 2,283 individuals — African American or Afro-Caribbean Carribean UKB —
PSS007768 — — 2,423 individuals — African American or Afro-Caribbean Carribean UKB —
PSS008421 — — 1,102 individuals — Greater Middle Eastern (Middle Eastern, North African or Persian) Iran (Middle East) UKB —
PSS009319 — — 18,164 individuals — European UK (+ Ireland) UKB —
PSS008423 — — 1,179 individuals — Greater Middle Eastern (Middle Eastern, North African or Persian) Iran (Middle East) UKB —
PSS009321 — — 19,218 individuals — European UK (+ Ireland) UKB —
PSS009093 — — 3,734 individuals — European Poland (NE Europe) UKB —
PSS009095 — — 3,955 individuals — European Poland (NE Europe) UKB —
PSS008201 — — 5,719 individuals — South Asian India (South Asia) UKB —
PSS008203 — — 6,161 individuals — South Asian India (South Asia) UKB —
PSS011762 — — 8,417 individuals — European — BBofA —
PSS004756 — —
[
  • 173 cases
  • , 6,324 controls
]
 — African unspecified — UKB —
PSS004757 — —
[
  • 15 cases
  • , 1,689 controls
]
 — East Asian — UKB —
PSS004758 — —
[
  • 710 cases
  • , 24,195 controls
]
 — European non-white British ancestry UKB —
PSS004759 — —
[
  • 145 cases
  • , 7,686 controls
]
 — South Asian — UKB —
PSS004760 — —
[
  • 2,312 cases
  • , 65,113 controls
]
 — European white British ancestry UKB Testing cohort (heldout set)
PSS011364 — — 56,192 individuals — European — UKB —
PSS008870 — — 3,611 individuals — African unspecified Nigeria (West Africa) UKB —
PSS008872 — — 3,828 individuals — African unspecified Nigeria (West Africa) UKB —
PSS007983 — — 1,622 individuals — East Asian China (East Asia) UKB —
PSS007985 — — 1,785 individuals — East Asian China (East Asia) UKB —