Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
Scoring File (FTP Link)
PGS019469
(TPMI_593.2_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Microscopic hematuria Microscopic hematuria 939,824
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019469/ScoringFiles/PGS019469.txt.gz
PGS019470
(TPMI_593.2_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Microscopic hematuria Microscopic hematuria 40,557
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019470/ScoringFiles/PGS019470.txt.gz
PGS019471
(TPMI_593.2_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Microscopic hematuria Microscopic hematuria 983,778
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019471/ScoringFiles/PGS019471.txt.gz
PGS019472
(TPMI_593.2_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Microscopic hematuria Microscopic hematuria 1,005,807
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019472/ScoringFiles/PGS019472.txt.gz
PGS019473
(TPMI_594_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Urinary calculus urinary volume 2,608
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019473/ScoringFiles/PGS019473.txt.gz
PGS019474
(TPMI_594_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Urinary calculus urinary volume 939,830
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019474/ScoringFiles/PGS019474.txt.gz
PGS019475
(TPMI_594_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Urinary calculus urinary volume 81,176
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019475/ScoringFiles/PGS019475.txt.gz
PGS019476
(TPMI_594_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Urinary calculus urinary volume 983,782
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019476/ScoringFiles/PGS019476.txt.gz
PGS019477
(TPMI_594_PRSmix+)
PGP000835 |
Chen HH et al. Nature (2025)
Urinary calculus urinary volume 1,071,465
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019477/ScoringFiles/PGS019477.txt.gz
PGS019478
(TPMI_594_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Urinary calculus urinary volume 509,717
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019478/ScoringFiles/PGS019478.txt.gz
PGS019479
(TPMI_594.1_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Calculus of kidney kidney volume 2,076
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019479/ScoringFiles/PGS019479.txt.gz
PGS019480
(TPMI_594.1_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Calculus of kidney kidney volume 370,680
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019480/ScoringFiles/PGS019480.txt.gz
PGS019481
(TPMI_594.1_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Calculus of kidney kidney volume 55,216
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019481/ScoringFiles/PGS019481.txt.gz
PGS019482
(TPMI_594.1_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Calculus of kidney kidney volume 983,776
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019482/ScoringFiles/PGS019482.txt.gz
PGS019483
(TPMI_594.1_PRSmix+)
PGP000835 |
Chen HH et al. Nature (2025)
Calculus of kidney kidney volume 1,041,148
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019483/ScoringFiles/PGS019483.txt.gz
PGS019484
(TPMI_594.1_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Calculus of kidney kidney volume 993,811
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019484/ScoringFiles/PGS019484.txt.gz
PGS019485
(TPMI_594.3_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Calculus of ureter ureterolithiasis 127,322
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019485/ScoringFiles/PGS019485.txt.gz
PGS019486
(TPMI_594.3_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Calculus of ureter ureterolithiasis 939,826
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019486/ScoringFiles/PGS019486.txt.gz
PGS019487
(TPMI_594.3_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Calculus of ureter ureterolithiasis 46,910
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019487/ScoringFiles/PGS019487.txt.gz
PGS019488
(TPMI_594.3_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Calculus of ureter ureterolithiasis 983,779
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019488/ScoringFiles/PGS019488.txt.gz
PGS019489
(TPMI_594.3_PRSmix+)
PGP000835 |
Chen HH et al. Nature (2025)
Calculus of ureter ureterolithiasis 1,070,068
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019489/ScoringFiles/PGS019489.txt.gz
PGS019490
(TPMI_594.3_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Calculus of ureter ureterolithiasis 993,975
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019490/ScoringFiles/PGS019490.txt.gz
PGS019491
(TPMI_595_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Hydronephrosis hydronephrosis 513,891
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019491/ScoringFiles/PGS019491.txt.gz
PGS019492
(TPMI_595_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Hydronephrosis hydronephrosis 939,887
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019492/ScoringFiles/PGS019492.txt.gz
PGS019493
(TPMI_595_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Hydronephrosis hydronephrosis 29,293
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019493/ScoringFiles/PGS019493.txt.gz
PGS019494
(TPMI_595_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Hydronephrosis hydronephrosis 983,828
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019494/ScoringFiles/PGS019494.txt.gz
PGS019495
(TPMI_595_PRSmix+)
PGP000835 |
Chen HH et al. Nature (2025)
Hydronephrosis hydronephrosis 1,070,950
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019495/ScoringFiles/PGS019495.txt.gz
PGS019496
(TPMI_595_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Hydronephrosis hydronephrosis 998,183
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019496/ScoringFiles/PGS019496.txt.gz
PGS019497
(TPMI_597_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Other disorders of urethra and urinary tract urinary system disorder 76,371
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019497/ScoringFiles/PGS019497.txt.gz
PGS019498
(TPMI_597_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Other disorders of urethra and urinary tract urinary system disorder 939,885
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019498/ScoringFiles/PGS019498.txt.gz
PGS019499
(TPMI_597_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Other disorders of urethra and urinary tract urinary system disorder 513,693
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019499/ScoringFiles/PGS019499.txt.gz
PGS019500
(TPMI_597_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Other disorders of urethra and urinary tract urinary system disorder 983,826
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019500/ScoringFiles/PGS019500.txt.gz
PGS019501
(TPMI_597_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Other disorders of urethra and urinary tract urinary system disorder 875,558
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019501/ScoringFiles/PGS019501.txt.gz
PGS019502
(TPMI_598_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Abnormal findings on examination of urine urinary system disorder 694,136
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019502/ScoringFiles/PGS019502.txt.gz
PGS019503
(TPMI_598_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Abnormal findings on examination of urine urinary system disorder 939,897
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019503/ScoringFiles/PGS019503.txt.gz
PGS019504
(TPMI_598_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Abnormal findings on examination of urine urinary system disorder 15,498
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019504/ScoringFiles/PGS019504.txt.gz
PGS019505
(TPMI_598_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Abnormal findings on examination of urine urinary system disorder 983,833
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019505/ScoringFiles/PGS019505.txt.gz
PGS019506
(TPMI_598_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Abnormal findings on examination of urine urinary system disorder 908,372
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019506/ScoringFiles/PGS019506.txt.gz
PGS019507
(TPMI_598.9_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonspecific findings on examination of urine abnormal result of function studies 712,658
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019507/ScoringFiles/PGS019507.txt.gz
PGS019508
(TPMI_598.9_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonspecific findings on examination of urine abnormal result of function studies 939,829
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019508/ScoringFiles/PGS019508.txt.gz
PGS019509
(TPMI_598.9_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonspecific findings on examination of urine abnormal result of function studies 22,276
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019509/ScoringFiles/PGS019509.txt.gz
PGS019510
(TPMI_598.9_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonspecific findings on examination of urine abnormal result of function studies 983,789
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019510/ScoringFiles/PGS019510.txt.gz
PGS019511
(TPMI_598.9_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonspecific findings on examination of urine abnormal result of function studies 905,790
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019511/ScoringFiles/PGS019511.txt.gz
PGS019512
(TPMI_599.2_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Retention of urine Urinary retention 234
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019512/ScoringFiles/PGS019512.txt.gz
PGS019513
(TPMI_599.2_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Retention of urine Urinary retention 105,295
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019513/ScoringFiles/PGS019513.txt.gz
PGS019514
(TPMI_599.2_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Retention of urine Urinary retention 555,975
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019514/ScoringFiles/PGS019514.txt.gz
PGS019515
(TPMI_599.2_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Retention of urine Urinary retention 983,821
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019515/ScoringFiles/PGS019515.txt.gz
PGS019516
(TPMI_599.2_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Retention of urine Urinary retention 992,540
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019516/ScoringFiles/PGS019516.txt.gz
PGS019517
(TPMI_599.5_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Frequency of urination and polyuria Polyuria 206,142
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019517/ScoringFiles/PGS019517.txt.gz
PGS019518
(TPMI_599.5_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Frequency of urination and polyuria Polyuria 939,875
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019518/ScoringFiles/PGS019518.txt.gz