Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
Scoring File (FTP Link)
PGS019519
(TPMI_599.5_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Frequency of urination and polyuria Polyuria 544,657
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019519/ScoringFiles/PGS019519.txt.gz
PGS019520
(TPMI_599.5_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Frequency of urination and polyuria Polyuria 983,815
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019520/ScoringFiles/PGS019520.txt.gz
PGS019521
(TPMI_599.5_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Frequency of urination and polyuria Polyuria 980,241
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019521/ScoringFiles/PGS019521.txt.gz
PGS019522
(TPMI_600_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Hyperplasia of prostate benign prostatic hyperplasia 152,433
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019522/ScoringFiles/PGS019522.txt.gz
PGS019523
(TPMI_600_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Hyperplasia of prostate benign prostatic hyperplasia 939,823
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019523/ScoringFiles/PGS019523.txt.gz
PGS019524
(TPMI_600_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Hyperplasia of prostate benign prostatic hyperplasia 23,988
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019524/ScoringFiles/PGS019524.txt.gz
PGS019525
(TPMI_600_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Hyperplasia of prostate benign prostatic hyperplasia 983,774
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019525/ScoringFiles/PGS019525.txt.gz
PGS019526
(TPMI_600_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Hyperplasia of prostate benign prostatic hyperplasia 936,087
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019526/ScoringFiles/PGS019526.txt.gz
PGS019527
(TPMI_604_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Disorders of penis penile disorder 56,123
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019527/ScoringFiles/PGS019527.txt.gz
PGS019528
(TPMI_604_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Disorders of penis penile disorder 322,262
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019528/ScoringFiles/PGS019528.txt.gz
PGS019529
(TPMI_604_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Disorders of penis penile disorder 584,567
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019529/ScoringFiles/PGS019529.txt.gz
PGS019530
(TPMI_604_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Disorders of penis penile disorder 983,731
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019530/ScoringFiles/PGS019530.txt.gz
PGS019531
(TPMI_604_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Disorders of penis penile disorder 986,862
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019531/ScoringFiles/PGS019531.txt.gz
PGS019532
(TPMI_610.1_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Cystic mastopathy breast fibrocystic disease 1
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019532/ScoringFiles/PGS019532.txt.gz
PGS019533
(TPMI_610.1_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Cystic mastopathy breast fibrocystic disease 939,813
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019533/ScoringFiles/PGS019533.txt.gz
PGS019534
(TPMI_610.1_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Cystic mastopathy breast fibrocystic disease 531,434
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019534/ScoringFiles/PGS019534.txt.gz
PGS019535
(TPMI_610.1_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Cystic mastopathy breast fibrocystic disease 983,768
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019535/ScoringFiles/PGS019535.txt.gz
PGS019536
(TPMI_610.1_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Cystic mastopathy breast fibrocystic disease 994,396
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019536/ScoringFiles/PGS019536.txt.gz
PGS019537
(TPMI_611.3_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Lump or mass in breast breast neoplasm 7,018
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019537/ScoringFiles/PGS019537.txt.gz
PGS019538
(TPMI_611.3_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Lump or mass in breast breast neoplasm 939,878
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019538/ScoringFiles/PGS019538.txt.gz
PGS019539
(TPMI_611.3_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Lump or mass in breast breast neoplasm 12,220
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019539/ScoringFiles/PGS019539.txt.gz
PGS019540
(TPMI_611.3_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Lump or mass in breast breast neoplasm 983,818
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019540/ScoringFiles/PGS019540.txt.gz
PGS019541
(TPMI_611.3_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Lump or mass in breast breast neoplasm 966,845
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019541/ScoringFiles/PGS019541.txt.gz
PGS019542
(TPMI_613_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonmalignant breast conditions breast disorder 2,767
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019542/ScoringFiles/PGS019542.txt.gz
PGS019543
(TPMI_613_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonmalignant breast conditions breast disorder 333,845
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019543/ScoringFiles/PGS019543.txt.gz
PGS019544
(TPMI_613_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonmalignant breast conditions breast disorder 467,665
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019544/ScoringFiles/PGS019544.txt.gz
PGS019545
(TPMI_613_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonmalignant breast conditions breast disorder 983,824
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019545/ScoringFiles/PGS019545.txt.gz
PGS019546
(TPMI_613_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonmalignant breast conditions breast disorder 949,941
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019546/ScoringFiles/PGS019546.txt.gz
PGS019547
(TPMI_613.7_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Other signs and symptoms in breast sign or symptom 2
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019547/ScoringFiles/PGS019547.txt.gz
PGS019548
(TPMI_613.7_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Other signs and symptoms in breast sign or symptom 939,891
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019548/ScoringFiles/PGS019548.txt.gz
PGS019549
(TPMI_613.7_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Other signs and symptoms in breast sign or symptom 21,120
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019549/ScoringFiles/PGS019549.txt.gz
PGS019550
(TPMI_613.7_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Other signs and symptoms in breast sign or symptom 983,826
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019550/ScoringFiles/PGS019550.txt.gz
PGS019551
(TPMI_613.7_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Other signs and symptoms in breast sign or symptom 976,239
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019551/ScoringFiles/PGS019551.txt.gz
PGS019552
(TPMI_615_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Endometriosis endometriosis 787
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019552/ScoringFiles/PGS019552.txt.gz
PGS019553
(TPMI_615_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Endometriosis endometriosis 939,817
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019553/ScoringFiles/PGS019553.txt.gz
PGS019554
(TPMI_615_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Endometriosis endometriosis 28,093
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019554/ScoringFiles/PGS019554.txt.gz
PGS019555
(TPMI_615_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Endometriosis endometriosis 983,765
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019555/ScoringFiles/PGS019555.txt.gz
PGS019556
(TPMI_615_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Endometriosis endometriosis 972,671
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019556/ScoringFiles/PGS019556.txt.gz
PGS019557
(TPMI_619.1_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Noninflammatory disorders of ovary fallopian tube and broad ligament ovarian disorder 116,971
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019557/ScoringFiles/PGS019557.txt.gz
PGS019558
(TPMI_619.1_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Noninflammatory disorders of ovary fallopian tube and broad ligament ovarian disorder 939,822
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019558/ScoringFiles/PGS019558.txt.gz
PGS019559
(TPMI_619.1_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Noninflammatory disorders of ovary fallopian tube and broad ligament ovarian disorder 28,397
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019559/ScoringFiles/PGS019559.txt.gz
PGS019560
(TPMI_619.1_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Noninflammatory disorders of ovary fallopian tube and broad ligament ovarian disorder 983,772
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019560/ScoringFiles/PGS019560.txt.gz
PGS019561
(TPMI_619.1_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Noninflammatory disorders of ovary fallopian tube and broad ligament ovarian disorder 1,000,442
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019561/ScoringFiles/PGS019561.txt.gz
PGS019562
(TPMI_626_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Disorders of menstruation and other abnormal bleeding from female genital tract menstrual disorder 704,441
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019562/ScoringFiles/PGS019562.txt.gz
PGS019563
(TPMI_626_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Disorders of menstruation and other abnormal bleeding from female genital tract menstrual disorder 364,062
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019563/ScoringFiles/PGS019563.txt.gz
PGS019564
(TPMI_626_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Disorders of menstruation and other abnormal bleeding from female genital tract menstrual disorder 21,876
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019564/ScoringFiles/PGS019564.txt.gz
PGS019565
(TPMI_626_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Disorders of menstruation and other abnormal bleeding from female genital tract menstrual disorder 983,758
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019565/ScoringFiles/PGS019565.txt.gz
PGS019566
(TPMI_626_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Disorders of menstruation and other abnormal bleeding from female genital tract menstrual disorder 966,753
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019566/ScoringFiles/PGS019566.txt.gz
PGS019567
(TPMI_626.13_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Irregular menstrual cycle menstrual disorder 714,359
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019567/ScoringFiles/PGS019567.txt.gz
PGS019568
(TPMI_626.13_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Irregular menstrual cycle menstrual disorder 323,552
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019568/ScoringFiles/PGS019568.txt.gz