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PGS Catalog
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Polygenic Scores (PGS)
Polygenic Scores (PGS)
Filter PGS by Participant Ancestry
Individuals included in:
Any Stage [G, D, E]
All Stages combined [G + D + E]
Development [G, D]
- GWAS [G]
- Score development [D]
PGS Evaluation [E]
G
- Source of Variant Associations (
G
WAS)
D
- Score
D
evelopment/Training
E
- PGS
E
valuation
List of ancestries includes:
--
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
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Multi-ancestry data
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name
PGS Publication ID
(PGP)
Reported Trait
Mapped Trait(s)
(Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File
(FTP Link)
PGS019519
(TPMI_599.5_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Frequency of urination and polyuria
Polyuria
544,657
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019519/ScoringFiles/PGS019519.txt.gz
PGS019520
(TPMI_599.5_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Frequency of urination and polyuria
Polyuria
983,815
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019520/ScoringFiles/PGS019520.txt.gz
PGS019521
(TPMI_599.5_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Frequency of urination and polyuria
Polyuria
980,241
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019521/ScoringFiles/PGS019521.txt.gz
PGS019522
(TPMI_600_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Hyperplasia of prostate
benign prostatic hyperplasia
152,433
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019522/ScoringFiles/PGS019522.txt.gz
PGS019523
(TPMI_600_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Hyperplasia of prostate
benign prostatic hyperplasia
939,823
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019523/ScoringFiles/PGS019523.txt.gz
PGS019524
(TPMI_600_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Hyperplasia of prostate
benign prostatic hyperplasia
23,988
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019524/ScoringFiles/PGS019524.txt.gz
PGS019525
(TPMI_600_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Hyperplasia of prostate
benign prostatic hyperplasia
983,774
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019525/ScoringFiles/PGS019525.txt.gz
PGS019526
(TPMI_600_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Hyperplasia of prostate
benign prostatic hyperplasia
936,087
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019526/ScoringFiles/PGS019526.txt.gz
PGS019527
(TPMI_604_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Disorders of penis
penile disorder
56,123
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019527/ScoringFiles/PGS019527.txt.gz
PGS019528
(TPMI_604_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Disorders of penis
penile disorder
322,262
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019528/ScoringFiles/PGS019528.txt.gz
PGS019529
(TPMI_604_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Disorders of penis
penile disorder
584,567
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019529/ScoringFiles/PGS019529.txt.gz
PGS019530
(TPMI_604_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Disorders of penis
penile disorder
983,731
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019530/ScoringFiles/PGS019530.txt.gz
PGS019531
(TPMI_604_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Disorders of penis
penile disorder
986,862
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019531/ScoringFiles/PGS019531.txt.gz
PGS019532
(TPMI_610.1_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Cystic mastopathy
breast fibrocystic disease
1
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019532/ScoringFiles/PGS019532.txt.gz
PGS019533
(TPMI_610.1_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Cystic mastopathy
breast fibrocystic disease
939,813
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019533/ScoringFiles/PGS019533.txt.gz
PGS019534
(TPMI_610.1_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Cystic mastopathy
breast fibrocystic disease
531,434
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019534/ScoringFiles/PGS019534.txt.gz
PGS019535
(TPMI_610.1_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Cystic mastopathy
breast fibrocystic disease
983,768
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019535/ScoringFiles/PGS019535.txt.gz
PGS019536
(TPMI_610.1_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Cystic mastopathy
breast fibrocystic disease
994,396
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019536/ScoringFiles/PGS019536.txt.gz
PGS019537
(TPMI_611.3_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Lump or mass in breast
breast neoplasm
7,018
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019537/ScoringFiles/PGS019537.txt.gz
PGS019538
(TPMI_611.3_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Lump or mass in breast
breast neoplasm
939,878
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019538/ScoringFiles/PGS019538.txt.gz
PGS019539
(TPMI_611.3_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Lump or mass in breast
breast neoplasm
12,220
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019539/ScoringFiles/PGS019539.txt.gz
PGS019540
(TPMI_611.3_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Lump or mass in breast
breast neoplasm
983,818
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019540/ScoringFiles/PGS019540.txt.gz
PGS019541
(TPMI_611.3_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Lump or mass in breast
breast neoplasm
966,845
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019541/ScoringFiles/PGS019541.txt.gz
PGS019542
(TPMI_613_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Other nonmalignant breast conditions
breast disorder
2,767
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019542/ScoringFiles/PGS019542.txt.gz
PGS019543
(TPMI_613_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Other nonmalignant breast conditions
breast disorder
333,845
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019543/ScoringFiles/PGS019543.txt.gz
PGS019544
(TPMI_613_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Other nonmalignant breast conditions
breast disorder
467,665
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019544/ScoringFiles/PGS019544.txt.gz
PGS019545
(TPMI_613_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Other nonmalignant breast conditions
breast disorder
983,824
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019545/ScoringFiles/PGS019545.txt.gz
PGS019546
(TPMI_613_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Other nonmalignant breast conditions
breast disorder
949,941
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019546/ScoringFiles/PGS019546.txt.gz
PGS019547
(TPMI_613.7_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Other signs and symptoms in breast
sign or symptom
2
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019547/ScoringFiles/PGS019547.txt.gz
PGS019548
(TPMI_613.7_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Other signs and symptoms in breast
sign or symptom
939,891
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019548/ScoringFiles/PGS019548.txt.gz
PGS019549
(TPMI_613.7_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Other signs and symptoms in breast
sign or symptom
21,120
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019549/ScoringFiles/PGS019549.txt.gz
PGS019550
(TPMI_613.7_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Other signs and symptoms in breast
sign or symptom
983,826
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019550/ScoringFiles/PGS019550.txt.gz
PGS019551
(TPMI_613.7_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Other signs and symptoms in breast
sign or symptom
976,239
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019551/ScoringFiles/PGS019551.txt.gz
PGS019552
(TPMI_615_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Endometriosis
endometriosis
787
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019552/ScoringFiles/PGS019552.txt.gz
PGS019553
(TPMI_615_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Endometriosis
endometriosis
939,817
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019553/ScoringFiles/PGS019553.txt.gz
PGS019554
(TPMI_615_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Endometriosis
endometriosis
28,093
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019554/ScoringFiles/PGS019554.txt.gz
PGS019555
(TPMI_615_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Endometriosis
endometriosis
983,765
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019555/ScoringFiles/PGS019555.txt.gz
PGS019556
(TPMI_615_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Endometriosis
endometriosis
972,671
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019556/ScoringFiles/PGS019556.txt.gz
PGS019557
(TPMI_619.1_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Noninflammatory disorders of ovary fallopian tube and broad ligament
ovarian disorder
116,971
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019557/ScoringFiles/PGS019557.txt.gz
PGS019558
(TPMI_619.1_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Noninflammatory disorders of ovary fallopian tube and broad ligament
ovarian disorder
939,822
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019558/ScoringFiles/PGS019558.txt.gz
PGS019559
(TPMI_619.1_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Noninflammatory disorders of ovary fallopian tube and broad ligament
ovarian disorder
28,397
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019559/ScoringFiles/PGS019559.txt.gz
PGS019560
(TPMI_619.1_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Noninflammatory disorders of ovary fallopian tube and broad ligament
ovarian disorder
983,772
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019560/ScoringFiles/PGS019560.txt.gz
PGS019561
(TPMI_619.1_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Noninflammatory disorders of ovary fallopian tube and broad ligament
ovarian disorder
1,000,442
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019561/ScoringFiles/PGS019561.txt.gz
PGS019562
(TPMI_626_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Disorders of menstruation and other abnormal bleeding from female genital tract
menstrual disorder
704,441
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019562/ScoringFiles/PGS019562.txt.gz
PGS019563
(TPMI_626_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Disorders of menstruation and other abnormal bleeding from female genital tract
menstrual disorder
364,062
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019563/ScoringFiles/PGS019563.txt.gz
PGS019564
(TPMI_626_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Disorders of menstruation and other abnormal bleeding from female genital tract
menstrual disorder
21,876
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019564/ScoringFiles/PGS019564.txt.gz
PGS019565
(TPMI_626_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Disorders of menstruation and other abnormal bleeding from female genital tract
menstrual disorder
983,758
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019565/ScoringFiles/PGS019565.txt.gz
PGS019566
(TPMI_626_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Disorders of menstruation and other abnormal bleeding from female genital tract
menstrual disorder
966,753
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019566/ScoringFiles/PGS019566.txt.gz
PGS019567
(TPMI_626.13_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Irregular menstrual cycle
menstrual disorder
714,359
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019567/ScoringFiles/PGS019567.txt.gz
PGS019568
(TPMI_626.13_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Irregular menstrual cycle
menstrual disorder
323,552
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019568/ScoringFiles/PGS019568.txt.gz
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