Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000051
(PRS67)
 PGP000036 |
Zhang X et al. PLoS Med (2018)
 Breast cancer breast carcinoma 67
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000051/ScoringFiles/PGS000051.txt.gz
PGS000052
(sPRS161)
 PGP000037 |
Lakeman IMM et al. J Med Genet (2019)
 Breast cancer breast carcinoma 161
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000052/ScoringFiles/PGS000052.txt.gz
PGS000053
(ALZ21_NIA-LOAD)
 PGP000039 |
Tosto G et al. Neurology (2017)
 Alzheimer's disease (late onset) late-onset Alzheimer's disease 21
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000053/ScoringFiles/PGS000053.txt.gz
PGS000054
(ALZ21_EFIGA)
 PGP000039 |
Tosto G et al. Neurology (2017)
 Alzheimer's disease (late onset) late-onset Alzheimer's disease 21
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000054/ScoringFiles/PGS000054.txt.gz
PGS000055
(PRS_CRC)
 PGP000040 |
Schmit SL et al. J Natl Cancer Inst (2019)
 Colorectal cancer colorectal cancer 76
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000055/ScoringFiles/PGS000055.txt.gz
PGS000056
(PD_PRS)
 PGP000041 |
Paul KC et al. JAMA Neurol (2018)
 Parkinson's disease Parkinson disease 23
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000056/ScoringFiles/PGS000056.txt.gz
PGS000057
(CHD57)
 PGP000042 |
Natarajan P et al. Circulation (2017)
 Coronary heart disease coronary artery disease 57
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000057/ScoringFiles/PGS000057.txt.gz
PGS000058
(CAD_GRS_204)
 PGP000043 |
Morieri ML et al. Diabetes Care (2018)
 Coronary artery disease coronary artery disease 204
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000058/ScoringFiles/PGS000058.txt.gz
PGS000059
(CHD46)
 PGP000044 |
Hajek C et al. Circ Genom Precis Med (2018)
 Coronary heart disease coronary artery disease 46
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000059/ScoringFiles/PGS000059.txt.gz
PGS000060
(GRS_HDL)
 PGP000045 |
Johnson L et al. PLoS One (2015)
 HDL cholesterol high density lipoprotein cholesterol measurement 46
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000060/ScoringFiles/PGS000060.txt.gz
PGS000061
(GRS_LDL)
 PGP000045 |
Johnson L et al. PLoS One (2015)
 Low-density lipoprotein (LDL) cholesterol low density lipoprotein cholesterol measurement 37
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000061/ScoringFiles/PGS000061.txt.gz
PGS000062
(GRS_TC)
 PGP000045 |
Johnson L et al. PLoS One (2015)
 Total cholesterol total cholesterol measurement 52
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000062/ScoringFiles/PGS000062.txt.gz
PGS000063
(GRS_TG)
 PGP000045 |
Johnson L et al. PLoS One (2015)
 Triglycerides triglyceride measurement 32
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000063/ScoringFiles/PGS000063.txt.gz
PGS000064
(GLGC2017_HDL)
 PGP000046 |
Kuchenbaecker K et al. Nat Commun (2019)
 HDL cholesterol high density lipoprotein cholesterol measurement 120
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000064/ScoringFiles/PGS000064.txt.gz
PGS000065
(GLGC2017_LDL)
 PGP000046 |
Kuchenbaecker K et al. Nat Commun (2019)
 LDL cholesterol low density lipoprotein cholesterol measurement 103
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000065/ScoringFiles/PGS000065.txt.gz
PGS000066
(GLGC2017_TG)
 PGP000046 |
Kuchenbaecker K et al. Nat Commun (2019)
 Triglycerides (TG) triglyceride measurement 101
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000066/ScoringFiles/PGS000066.txt.gz
PGS000067
(PCa_PHS)
 PGP000047 |
Seibert TM et al. BMJ (2018)
 Prostate cancer prostate carcinoma 54
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000067/ScoringFiles/PGS000067.txt.gz
PGS000068
(PRS_EOC)
 PGP000048 |
Yang X et al. J Med Genet (2018)
 Epithelial ovarian cancer ovarian carcinoma 15
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000068/ScoringFiles/PGS000068.txt.gz
PGS000069
(PRS_sEOC)
 PGP000048 |
Yang X et al. J Med Genet (2018)
 Serous epithelial ovarian cancer ovarian serous carcinoma 15
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000069/ScoringFiles/PGS000069.txt.gz
PGS000070
(PRS_LC_C)
 PGP000049 |
Dai J et al. Lancet Respir Med (2019)
 Lung cancer lung adenocarcinoma 19
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000070/ScoringFiles/PGS000070.txt.gz
PGS000071
(CC_Bladder)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Bladder cancer urinary bladder carcinoma 15
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000071/ScoringFiles/PGS000071.txt.gz
PGS000072
(CC_Breast)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Breast cancer breast carcinoma 187
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000072/ScoringFiles/PGS000072.txt.gz
PGS000073
(CC_Cervix)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Cervical cancer cervical carcinoma 10
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000073/ScoringFiles/PGS000073.txt.gz
PGS000074
(CC_Colorectal)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Colorectal cancer colorectal cancer 103
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000074/ScoringFiles/PGS000074.txt.gz
PGS000075
(CC_Endo)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Endometrial cancer endometrial carcinoma 9
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000075/ScoringFiles/PGS000075.txt.gz
PGS000076
(CC_Kidney)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Kidney cancer renal cell carcinoma 19
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000076/ScoringFiles/PGS000076.txt.gz
PGS000077
(CC_LL)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Lymphocytic leukemia lymphoid leukemia 75
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000077/ScoringFiles/PGS000077.txt.gz
PGS000078
(CC_Lung)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Lung cancer lung carcinoma 109
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000078/ScoringFiles/PGS000078.txt.gz
PGS000079
(CC_Melanoma)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Melanoma melanoma 24
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000079/ScoringFiles/PGS000079.txt.gz
PGS000080
(CC_NHL)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Non-Hodgkin's lymphoma non-Hodgkins lymphoma 19
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000080/ScoringFiles/PGS000080.txt.gz
PGS000081
(CC_Oral)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Oral cavity and pharyngeal cancers oral cavity cancer,
pharynx cancer		 14
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000081/ScoringFiles/PGS000081.txt.gz
PGS000082
(CC_Ovary)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Ovarian cancer ovarian carcinoma 36
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000082/ScoringFiles/PGS000082.txt.gz
PGS000083
(CC_Pancreas)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Pancreatic cancer pancreatic carcinoma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000083/ScoringFiles/PGS000083.txt.gz
PGS000084
(CC_Prostate)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Prostate cancer prostate carcinoma 161
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000084/ScoringFiles/PGS000084.txt.gz
PGS000086
(CC_Testis)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Testicular cancer testicular carcinoma,
Testicular Germ Cell Tumor		 52
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000086/ScoringFiles/PGS000086.txt.gz
PGS000087
(CC_Thyroid)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Thyroid cancer thyroid carcinoma 12
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000087/ScoringFiles/PGS000087.txt.gz
PGS000088
(baso)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 Basophil count basophil count 9,121
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000088/ScoringFiles/PGS000088.txt.gz
PGS000089
(baso_p)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 Basophil percentage of white cells basophil percentage of leukocytes 5,248
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000089/ScoringFiles/PGS000089.txt.gz
PGS000090
(eo)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 Eosinophil count eosinophil count 22,949
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000090/ScoringFiles/PGS000090.txt.gz
PGS000091
(eo_p)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 Eosinophil percentage of white cells eosinophil percentage of leukocytes 24,406
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000091/ScoringFiles/PGS000091.txt.gz
PGS000092
(hct)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 Hematocrit hematocrit 28,214
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000092/ScoringFiles/PGS000092.txt.gz
PGS000093
(hgb)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 Hemoglobin concentration hemoglobin measurement 25,090
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000093/ScoringFiles/PGS000093.txt.gz
PGS000094
(hlr)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 High light scatter reticulocyte count reticulocyte count 25,493
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000094/ScoringFiles/PGS000094.txt.gz
PGS000095
(hlr_p)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 High light scatter reticulocyte percentage of red cells reticulocyte count 21,957
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000095/ScoringFiles/PGS000095.txt.gz
PGS000096
(irf)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 Immature fraction of reticulocytes reticulocyte count 17,850
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000096/ScoringFiles/PGS000096.txt.gz
PGS000097
(lymph)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 Lymphocyte count lymphocyte count 24,646
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000097/ScoringFiles/PGS000097.txt.gz
PGS000098
(lymph_p)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 Lymphocyte percentage of white cells lymphocyte percentage of leukocytes 22,363
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000098/ScoringFiles/PGS000098.txt.gz
PGS000099
(mch)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 Mean corpuscular hemoglobin mean corpuscular hemoglobin 27,081
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000099/ScoringFiles/PGS000099.txt.gz
PGS000100
(mchc)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 Mean corpuscular hemoglobin concentration mean corpuscular hemoglobin concentration 11,832
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000100/ScoringFiles/PGS000100.txt.gz
PGS000101
(mcv)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 Mean corpuscular volume mean corpuscular volume 25,001
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000101/ScoringFiles/PGS000101.txt.gz
Showing 51 to 100 of 5011 rows