Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000753
(PRS29_AAA)
 PGP000159 |
Klarin D et al. Circulation (2020)
 Abdominal aortic aneurysm Abdominal Aortic Aneurysm 29
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000753/ScoringFiles/PGS000753.txt.gz
PGS000752
(PGS_Lpa)
 PGP000157 |
Dron JS et al. Circ Genom Precis Med (2021)
 Lipoprotein A concentration [nmol/L] lipoprotein A measurement 11,446
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000752/ScoringFiles/PGS000752.txt.gz
PGS000751
(PRS_PrCa_EuropeanWeighted)
 PGP000156 |
Du Z et al. Int J Cancer (2019)
 Prostate cancer prostate carcinoma 178
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000751/ScoringFiles/PGS000751.txt.gz
PGS000750
(PRS_43)
 PGP000155 |
Bobbili DR et al. J Med Genet (2020)
 Parkinson's disease Parkinson disease 43
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000750/ScoringFiles/PGS000750.txt.gz
PGS000749
(PRS_COMBINED)
 PGP000152 |
Gola D et al. Circ Genom Precis Med (2020)
 Coronary artery disease coronary artery disease 1,056,021
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000749/ScoringFiles/PGS000749.txt.gz
PGS000748
(PRS_DE)
 PGP000152 |
Gola D et al. Circ Genom Precis Med (2020)
 Coronary artery disease coronary artery disease 3,423,987
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000748/ScoringFiles/PGS000748.txt.gz
PGS000747
(PRS_EB)
 PGP000152 |
Gola D et al. Circ Genom Precis Med (2020)
 Coronary artery disease coronary artery disease 375,822
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000747/ScoringFiles/PGS000747.txt.gz
PGS000746
(PRS_UKB)
 PGP000152 |
Gola D et al. Circ Genom Precis Med (2020)
 Coronary artery disease coronary artery disease 1,940
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000746/ScoringFiles/PGS000746.txt.gz
PGS000745
(PRS_melanoma_telomere.pathway)
 PGP000151 |
Cust AE et al. J Invest Dermatol (2018)
 Melanoma melanoma 9
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000745/ScoringFiles/PGS000745.txt.gz
PGS000744
(PRS_melanoma_pigment.pathway)
 PGP000151 |
Cust AE et al. J Invest Dermatol (2018)
 Melanoma melanoma 31
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000744/ScoringFiles/PGS000744.txt.gz
PGS000743
(PRS_melanoma)
 PGP000151 |
Cust AE et al. J Invest Dermatol (2018)
 Melanoma melanoma 45
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000743/ScoringFiles/PGS000743.txt.gz
PGS000742
(PHS166)
 PGP000150 |
Karunamuni RA et al. Prostate Cancer Prostatic Dis (2021)
 Prostate cancer prostate carcinoma 166
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000742/ScoringFiles/PGS000742.txt.gz
PGS000741
(PCa_PHS2)
 PGP000149 |
Huynh-Le MP et al. Nat Commun (2021)
 Prostate cancer prostate carcinoma 46
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000741/ScoringFiles/PGS000741.txt.gz
PGS000740
(PRS128_LC)
 PGP000148 |
Hung RJ et al. Cancer Res (2021)
 Lung cancer lung carcinoma 128
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000740/ScoringFiles/PGS000740.txt.gz
PGS000739
(HCM_GRS)
 PGP000146 |
Harper AR et al. Nat Genet (2021)
 Hypertrophic cardiomyopathy hypertrophic cardiomyopathy 27
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000739/ScoringFiles/PGS000739.txt.gz
PGS000738
(CONFIRMED_PGS)
 PGP000145 |
Roberts GHL et al. Am J Hum Genet (2019)
 Vitiligo Vitiligo 48
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000738/ScoringFiles/PGS000738.txt.gz
PGS000737
(PRS_BrS)
 PGP000144 |
Tadros R et al. Eur Heart J (2019)
 Brugada syndrome Brugada syndrome 3
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000737/ScoringFiles/PGS000737.txt.gz
PGS000736
(PRS_QRS)
 PGP000144 |
Tadros R et al. Eur Heart J (2019)
 QRS duration QRS duration 26
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000736/ScoringFiles/PGS000736.txt.gz
PGS000735
(PRS_PR)
 PGP000144 |
Tadros R et al. Eur Heart J (2019)
 PR interval PR interval 44
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000735/ScoringFiles/PGS000735.txt.gz
PGS000734
(PRS95_CRC)
 PGP000142 |
Archambault AN et al. Gastroenterology (2019)
 Colorectal cancer colorectal cancer 95
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000734/ScoringFiles/PGS000734.txt.gz
PGS000733
(PHS46+African)
 PGP000139 |
Karunamuni RA et al. Int J Cancer (2020)
 Prostate cancer prostate carcinoma 49
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000733/ScoringFiles/PGS000733.txt.gz
PGS000732
(PRS_Melanoma)
 PGP000138 |
Fontanillas P et al. Nat Commun (2021)
 Melanoma melanoma 18
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000732/ScoringFiles/PGS000732.txt.gz - Check Terms/Licenses
PGS000731
(PRS_SCC)
 PGP000138 |
Fontanillas P et al. Nat Commun (2021)
 Squamous cell carcinoma squamous cell carcinoma 14
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000731/ScoringFiles/PGS000731.txt.gz - Check Terms/Licenses
PGS000730
(PRS_BCC)
 PGP000138 |
Fontanillas P et al. Nat Commun (2021)
 Basal cell carcinoma basal cell carcinoma 47
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000730/ScoringFiles/PGS000730.txt.gz - Check Terms/Licenses
PGS000729
(T2D_PGS)
 PGP000137 |
Ritchie SC et al. Nat Metab (2021)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 2,017,388
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000729/ScoringFiles/PGS000729.txt.gz
PGS000728
(CKD_PGS)
 PGP000137 |
Ritchie SC et al. Nat Metab (2021)
 Chronic kidney disease chronic kidney disease 1,958,860
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000728/ScoringFiles/PGS000728.txt.gz
PGS000727
(AF_PGS)
 PGP000137 |
Ritchie SC et al. Nat Metab (2021)
 Atrial fibrillation atrial fibrillation 2,210,336
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000727/ScoringFiles/PGS000727.txt.gz
PGS000726
(PGS12_CIR)
 PGP000136 |
Emdin CA et al. Gastroenterology (2020)
 Cirrhosis cirrhosis of liver 12
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000726/ScoringFiles/PGS000726.txt.gz
PGS000725
(PRS_Pancreas)
 PGP000135 |
Jia G et al. JNCI Cancer Spectr (2020)
 Pancreatic cancer pancreatic carcinoma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000725/ScoringFiles/PGS000725.txt.gz
PGS000724
(PRS_Ovary)
 PGP000135 |
Jia G et al. JNCI Cancer Spectr (2020)
 Epithelial ovarian cancer ovarian carcinoma 31
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000724/ScoringFiles/PGS000724.txt.gz
PGS000723
(PRS_Bladder)
 PGP000135 |
Jia G et al. JNCI Cancer Spectr (2020)
 Bladder cancer urinary bladder carcinoma 14
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000723/ScoringFiles/PGS000723.txt.gz
PGS000722
(PRS_Kidney)
 PGP000135 |
Jia G et al. JNCI Cancer Spectr (2020)
 Kidney cancer renal carcinoma 15
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000722/ScoringFiles/PGS000722.txt.gz
PGS000721
(PRS_Lung)
 PGP000135 |
Jia G et al. JNCI Cancer Spectr (2020)
 Lung cancer lung carcinoma 19
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000721/ScoringFiles/PGS000721.txt.gz
PGS000720
(PRS_Colorectal)
 PGP000135 |
Jia G et al. JNCI Cancer Spectr (2020)
 Colorectal cancer colorectal cancer 95
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000720/ScoringFiles/PGS000720.txt.gz
PGS000719
(PRS_Prostate)
 PGP000135 |
Jia G et al. JNCI Cancer Spectr (2020)
 Prostate cancer prostate carcinoma 134
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000719/ScoringFiles/PGS000719.txt.gz
PGS000718
(PRPBB_44)
 PGP000134 |
Lanfear DE et al. Circ Heart Fail (2020)
 Beta-blocker survival benefit response to beta blocker 44
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000718/ScoringFiles/PGS000718.txt.gz
PGS000717
(PGS557_albs)
 PGP000132 |
Richardson TG et al. BMJ (2020)
 Adult life body size body mass index 557
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000717/ScoringFiles/PGS000717.txt.gz
PGS000716
(PGS295_elbs)
 PGP000132 |
Richardson TG et al. BMJ (2020)
 Early life body size body mass index,
comparative body size at age 10, self-reported		 295
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000716/ScoringFiles/PGS000716.txt.gz
PGS000714
(PRS55_PC)
 PGP000130 |
Sipeky C et al. Sci Rep (2020)
 Prostate cancer prostate carcinoma 55
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000714/ScoringFiles/PGS000714.txt.gz
PGS000713
(T2D)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 183,830
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000713/ScoringFiles/PGS000713.txt.gz - Check Terms/Licenses
PGS000712
(T2D_HbA1c_39)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 T2D (cases vs HbA1c filtered controls) type 2 diabetes mellitus 183,695
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000712/ScoringFiles/PGS000712.txt.gz - Check Terms/Licenses
PGS000711
(HC328)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Gout gout 183,332
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000711/ScoringFiles/PGS000711.txt.gz - Check Terms/Licenses
PGS000710
(HC326)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Myocardial infarction myocardial infarction 183,566
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000710/ScoringFiles/PGS000710.txt.gz - Check Terms/Licenses
PGS000709
(HC299)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Heart failure heart failure 183,287
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000709/ScoringFiles/PGS000709.txt.gz - Check Terms/Licenses
PGS000708
(HC294)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Kidney failure kidney failure 183,272
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000708/ScoringFiles/PGS000708.txt.gz - Check Terms/Licenses
PGS000707
(HC225)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Cholecystitis Cholecystitis 183,329
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000707/ScoringFiles/PGS000707.txt.gz - Check Terms/Licenses
PGS000706
(HC215)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Hypertension hypertension 186,726
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000706/ScoringFiles/PGS000706.txt.gz - Check Terms/Licenses
PGS000705
(HC188)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Gallstones gallstones 183,458
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000705/ScoringFiles/PGS000705.txt.gz - Check Terms/Licenses
PGS000704
(HC171)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Alcoholic cirrhosis alcoholic liver cirrhosis 183,271
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000704/ScoringFiles/PGS000704.txt.gz - Check Terms/Licenses
PGS000703
(HC132)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Angina angina pectoris 183,692
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000703/ScoringFiles/PGS000703.txt.gz - Check Terms/Licenses
Showing 4251 to 4300 of 5001 rows