Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
Scoring File (FTP Link)
PGS005069
(Phe_427_21_prscs_METAss_afrld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Atrial fibrillation (PheCode 427.21) atrial fibrillation 1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005069/ScoringFiles/PGS005069.txt.gz
PGS005070
(Phe_427_21_prscs_METAss_amrld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Atrial fibrillation (PheCode 427.21) atrial fibrillation 1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005070/ScoringFiles/PGS005070.txt.gz
PGS005071
(Phe_427_21_prscs_METAss_eurld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Atrial fibrillation (PheCode 427.21) atrial fibrillation 1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005071/ScoringFiles/PGS005071.txt.gz
PGS005079
(Phe_428_1_prscs_AFRss_afrld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Congestive heart failure (CHF), NOS (PheCode 428.1) congestive heart failure 1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005079/ScoringFiles/PGS005079.txt.gz
PGS005080
(Phe_428_1_prscs_EURss_eurld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Congestive heart failure (CHF), NOS (PheCode 428.1) congestive heart failure 1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005080/ScoringFiles/PGS005080.txt.gz
PGS005081
(Phe_428_1_prscs_HISss_amrld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Congestive heart failure (CHF), NOS (PheCode 428.1) congestive heart failure 1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005081/ScoringFiles/PGS005081.txt.gz
PGS005082
(Phe_428_1_prscs_METAss_afrld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Congestive heart failure (CHF), NOS (PheCode 428.1) congestive heart failure 1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005082/ScoringFiles/PGS005082.txt.gz
PGS005083
(Phe_428_1_prscs_METAss_amrld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Congestive heart failure (CHF), NOS (PheCode 428.1) congestive heart failure 1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005083/ScoringFiles/PGS005083.txt.gz
PGS005084
(Phe_428_1_prscs_METAss_eurld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Congestive heart failure (CHF), NOS (PheCode 428.1) congestive heart failure 1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005084/ScoringFiles/PGS005084.txt.gz
PGS005046
(Phe_411_2_prscsx_METAweight)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Myocardial infarction (PheCode 411.2) myocardial infarction 1,273,891
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005046/ScoringFiles/PGS005046.txt.gz
PGS005059
(Phe_411_3_prscsx_METAweight)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Angina pectoris (PheCode 411.3) angina pectoris 1,273,891
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005059/ScoringFiles/PGS005059.txt.gz
PGS005072
(Phe_427_21_prscsx_METAweight)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Atrial fibrillation (PheCode 427.21) atrial fibrillation 1,273,891
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005072/ScoringFiles/PGS005072.txt.gz
PGS005053
(Phe_411_3_prscs_AFRss_afrld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Angina pectoris (PheCode 411.3) angina pectoris 1,273,665
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005053/ScoringFiles/PGS005053.txt.gz
PGS005054
(Phe_411_3_prscs_EURss_eurld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Angina pectoris (PheCode 411.3) angina pectoris 1,273,665
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005054/ScoringFiles/PGS005054.txt.gz
PGS005055
(Phe_411_3_prscs_HISss_amrld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Angina pectoris (PheCode 411.3) angina pectoris 1,273,665
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005055/ScoringFiles/PGS005055.txt.gz
PGS005056
(Phe_411_3_prscs_METAss_afrld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Angina pectoris (PheCode 411.3) angina pectoris 1,273,665
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005056/ScoringFiles/PGS005056.txt.gz
PGS005057
(Phe_411_3_prscs_METAss_amrld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Angina pectoris (PheCode 411.3) angina pectoris 1,273,665
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005057/ScoringFiles/PGS005057.txt.gz
PGS005058
(Phe_411_3_prscs_METAss_eurld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Angina pectoris (PheCode 411.3) angina pectoris 1,273,665
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005058/ScoringFiles/PGS005058.txt.gz
PGS004962
(Hemoglobin_Mean_INT_prscs_AFRss_afrld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Hemoglobin hemoglobin measurement 1,273,252
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004962/ScoringFiles/PGS004962.txt.gz
PGS004963
(Hemoglobin_Mean_INT_prscs_EURss_eurld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Hemoglobin hemoglobin measurement 1,273,252
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004963/ScoringFiles/PGS004963.txt.gz
PGS004964
(Hemoglobin_Mean_INT_prscs_HISss_amrld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Hemoglobin hemoglobin measurement 1,273,252
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004964/ScoringFiles/PGS004964.txt.gz
PGS004965
(Hemoglobin_Mean_INT_prscs_METAss_afrld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Hemoglobin hemoglobin measurement 1,273,252
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004965/ScoringFiles/PGS004965.txt.gz
PGS004966
(Hemoglobin_Mean_INT_prscs_METAss_amrld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Hemoglobin hemoglobin measurement 1,273,252
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004966/ScoringFiles/PGS004966.txt.gz
PGS004967
(Hemoglobin_Mean_INT_prscs_METAss_eurld)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Hemoglobin hemoglobin measurement 1,273,252
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004967/ScoringFiles/PGS004967.txt.gz
PGS004834
(skin_cancer_PRSmixPlus_eur)
PGP000604 |
Truong B et al. Cell Genom (2024)
Skin cancer melanoma 1,271,902
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004834/ScoringFiles/PGS004834.txt.gz
PGS003964
(DBP_weightedPRSsum)
PGP000510 |
Kurniansyah N et al. Nat Commun (2023)
Diastolic blood pressure diastolic blood pressure 1,267,600
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003964/ScoringFiles/PGS003964.txt.gz
PGS003968
(SBP_weightedPRSsum)
PGP000510 |
Kurniansyah N et al. Nat Commun (2023)
Systolic blood pressure systolic blood pressure 1,267,240
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003968/ScoringFiles/PGS003968.txt.gz
PGS002308
(PRScsx_T2D)
PGP000331 |
Ge T et al. Genome Med (2022)
Type 2 diabetes (T2D) type 2 diabetes mellitus 1,259,754
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002308/ScoringFiles/PGS002308.txt.gz
PGS004772
(hct_PRSmix_sas)
PGP000604 |
Truong B et al. Cell Genom (2024)
Hematocrit hematocrit 1,259,662
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004772/ScoringFiles/PGS004772.txt.gz
PGS004774
(hct_PRSmixPlus_sas)
PGP000604 |
Truong B et al. Cell Genom (2024)
Hematocrit hematocrit 1,259,662
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004774/ScoringFiles/PGS004774.txt.gz
PGS005085
(Phe_428_1_prscsx_METAweight)
PGP000679 |
Gunn S et al. HGG Adv (2024)
Congestive heart failure (CHF), NOS (PheCode 428.1) congestive heart failure 1,256,161
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005085/ScoringFiles/PGS005085.txt.gz
PGS002805
(GIANT_HEIGHT_YENGO_2022_PGS_WEIGHTS_HIS)
PGP000382 |
Yengo L et al. Nature (2022)
Height body height 1,245,514
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002805/ScoringFiles/PGS002805.txt.gz
PGS000888
(GLGC_2021_ALL_LDL_PRS_weights_PRS-CS)
PGP000230 |
Graham SE et al. Nature (2021)
LDL cholesterol low density lipoprotein cholesterol measurement 1,239,184
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000888/ScoringFiles/PGS000888.txt.gz
PGS002781
(GLGC_2021_ALL_HDL_PRS_weights_PRS-CS)
PGP000366 |
Kanoni S et al. Genome Biol (2022)
HDL cholesterol high density lipoprotein cholesterol measurement 1,239,184
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002781/ScoringFiles/PGS002781.txt.gz
PGS002782
(GLGC_2021_ALL_nonHDL_PRS_weights_PRS-CS)
PGP000366 |
Kanoni S et al. Genome Biol (2022)
nonHDL Cholesterol non-high density lipoprotein cholesterol measurement 1,239,184
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002782/ScoringFiles/PGS002782.txt.gz
PGS001801
(PRS_Ratio)
PGP000264 |
Moll M et al. Lancet Respir Med (2020)
FEV1/FVC ratio FEV/FVC ratio 1,232,916
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001801/ScoringFiles/PGS001801.txt.gz
PGS000886
(GLGC_2021_AFR_LDL_PRS_weights_PRS-CS)
PGP000230 |
Graham SE et al. Nature (2021)
LDL cholesterol low density lipoprotein cholesterol measurement 1,222,318
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000886/ScoringFiles/PGS000886.txt.gz
PGS003961
(DBP_AFR)
PGP000510 |
Kurniansyah N et al. Nat Commun (2023)
Diastolic blood pressure diastolic blood pressure 1,221,464
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003961/ScoringFiles/PGS003961.txt.gz
PGS003965
(SBP_AFR)
PGP000510 |
Kurniansyah N et al. Nat Commun (2023)
Systolic blood pressure systolic blood pressure 1,221,464
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003965/ScoringFiles/PGS003965.txt.gz
PGS002724
(GIGASTROKE_iPGS_EUR)
PGP000333 |
Mishra A et al. Nature (2022)
Ischemic stroke stroke,
Ischemic stroke
1,213,574
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002724/ScoringFiles/PGS002724.txt.gz
PGS002932
(ExPRSweb_FPG_MAGIC-FastingGlucose_DBSLMM_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Fasting plasma glucose fasting blood glucose measurement 1,202,298
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002932/ScoringFiles/PGS002932.txt.gz
PGS004721
(AST_PRSmixPlus_eur)
PGP000604 |
Truong B et al. Cell Genom (2024)
Aspartate aminotransferase level aspartate aminotransferase measurement 1,196,185
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004721/ScoringFiles/PGS004721.txt.gz
PGS003365
(GSCAN_CigDay_2022_PRS_WEIGHTS_AFR)
PGP000410 |
Saunders GRB et al. Nature (2022)
Cigarettes smoked per day cigarettes per day measurement 1,196,168
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003365/ScoringFiles/PGS003365.txt.gz
PGS003357
(GSCAN_SmkInit_2022_PRS_WEIGHTS_AFR)
PGP000410 |
Saunders GRB et al. Nature (2022)
Smoking initiation smoking initiation 1,194,472
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003357/ScoringFiles/PGS003357.txt.gz
PGS004643
(LDL_EAS_ldpred2)
PGP000595 |
Zhang J et al. Nat Commun (2024)
LDL cholesterol low density lipoprotein cholesterol measurement 1,194,231
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004643/ScoringFiles/PGS004643.txt.gz
PGS004829
(sbp_PRSmix_eur)
PGP000604 |
Truong B et al. Cell Genom (2024)
Systolic blood pressure systolic blood pressure 1,194,211
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004829/ScoringFiles/PGS004829.txt.gz
PGS003369
(GSCAN_SmkCes_2022_PRS_WEIGHTS_AFR)
PGP000410 |
Saunders GRB et al. Nature (2022)
Smoking cessation smoking cessation 1,193,789
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003369/ScoringFiles/PGS003369.txt.gz
PGS003361
(GSCAN_AgeSmk_2022_PRS_WEIGHTS_AFR)
PGP000410 |
Saunders GRB et al. Nature (2022)
Age of smoking initiation age at initiation of smoking 1,193,754
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003361/ScoringFiles/PGS003361.txt.gz
PGS004658
(logTG_EAS_ldpred2)
PGP000595 |
Zhang J et al. Nat Commun (2024)
Log triglycerides triglyceride measurement 1,192,539
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004658/ScoringFiles/PGS004658.txt.gz
PGS003792
(LDL_EAS_LDpred2)
PGP000489 |
Zhang H et al. Nat Genet (2023)
LDL cholesterol low density lipoprotein cholesterol measurement 1,191,112
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003792/ScoringFiles/PGS003792.txt.gz