Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
Scoring File (FTP Link)
PGS001703
(GBE_INI25730)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA ISOVF in tract uncinate fasciculus (R) neuroimaging measurement,
brain volume measurement
83
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001703/ScoringFiles/PGS001703.txt.gz
PGS001227
(GBE_INI48)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Waist circumference waist circumference 25,538
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001227/ScoringFiles/PGS001227.txt.gz
PGS001983
(portability-PLR_log_waist_circ)
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Waist circumference waist circumference 96,496
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001983/ScoringFiles/PGS001983.txt.gz
PGS002201
(portability-ldpred2_log_waist_circ)
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Waist circumference waist circumference 984,035
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002201/ScoringFiles/PGS002201.txt.gz
PGS003555
(cont-decay-log_waist_circ)
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Waist circumference waist circumference 979,739
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003555/ScoringFiles/PGS003555.txt.gz
PGS003893
(INI48)
PGP000502 |
Tanigawa Y et al. AJHG (2023)
Waist circumference waist circumference 31,406
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003893/ScoringFiles/PGS003893.txt.gz
PGS004405
(X48.score)
PGP000561 |
Jung H et al. Commun Biol (2024)
Waist circumference waist circumference 1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004405/ScoringFiles/PGS004405.txt.gz
PGS000828
(WaistCircumference_PGS_F)
PGP000210 |
Zubair N et al. Sci Rep (2019)
Waist circumference (female) waist circumference,
female
149
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000828/ScoringFiles/PGS000828.txt.gz - Check Terms/Licenses
PGS000827
(WaistCircumference_PGS_M)
PGP000210 |
Zubair N et al. Sci Rep (2019)
Waist circumference (male) waist circumference,
male
113
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000827/ScoringFiles/PGS000827.txt.gz - Check Terms/Licenses
PGS000842
(WHR)
PGP000211 |
Aly DM et al. Nat Genet (2021)
Waist-hip ratio waist-hip ratio 39
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000842/ScoringFiles/PGS000842.txt.gz
PGS002356
(body_WHRadjBMIz.BOLT-LMM)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Waist-hip ratio waist-hip ratio 1,109,311
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002356/ScoringFiles/PGS002356.txt.gz
PGS002428
(body_WHRadjBMIz.P+T.0.0001)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Waist-hip ratio waist-hip ratio 9,477
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002428/ScoringFiles/PGS002428.txt.gz
PGS002477
(body_WHRadjBMIz.P+T.0.001)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Waist-hip ratio waist-hip ratio 27,033
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002477/ScoringFiles/PGS002477.txt.gz
PGS002526
(body_WHRadjBMIz.P+T.0.01)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Waist-hip ratio waist-hip ratio 126,268
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002526/ScoringFiles/PGS002526.txt.gz
PGS002575
(body_WHRadjBMIz.P+T.1e-06)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Waist-hip ratio waist-hip ratio 2,912
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002575/ScoringFiles/PGS002575.txt.gz
PGS002624
(body_WHRadjBMIz.P+T.5e-08)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Waist-hip ratio waist-hip ratio 1,829
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002624/ScoringFiles/PGS002624.txt.gz
PGS002673
(body_WHRadjBMIz.PolyFun-pred)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Waist-hip ratio waist-hip ratio 325,206
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002673/ScoringFiles/PGS002673.txt.gz
PGS002722
(body_WHRadjBMIz.SBayesR)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Waist-hip ratio waist-hip ratio 984,160
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002722/ScoringFiles/PGS002722.txt.gz
PGS003484
(LDPred2_WHR)
PGP000456 |
Zhang Y et al. EBioMedicine (2022)
Waist-hip ratio waist-hip ratio 855,882
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003484/ScoringFiles/PGS003484.txt.gz
PGS000299
(GRS462_WHRadjBMI)
PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
Waist-to-hip ratio (body mass index adjusted) BMI-adjusted waist-hip ratio 462
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000299/ScoringFiles/PGS000299.txt.gz
PGS001704
(GBE_INI25580)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L1 in tract forceps minor neuroimaging measurement,
brain volume measurement
514
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001704/ScoringFiles/PGS001704.txt.gz
PGS001705
(GBE_INI25581)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L1 in tract inferior fronto-occipital fasciculus (L) neuroimaging measurement,
brain volume measurement
547
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001705/ScoringFiles/PGS001705.txt.gz
PGS001706
(GBE_INI25582)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L1 in tract inferior fronto-occipital fasciculus (R) neuroimaging measurement,
brain volume measurement
322
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001706/ScoringFiles/PGS001706.txt.gz
PGS001707
(GBE_INI25583)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L1 in tract inferior longitudinal fasciculus (L) neuroimaging measurement,
brain volume measurement
499
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001707/ScoringFiles/PGS001707.txt.gz
PGS001708
(GBE_INI25584)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L1 in tract inferior longitudinal fasciculus (R) neuroimaging measurement,
brain volume measurement
316
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001708/ScoringFiles/PGS001708.txt.gz
PGS001709
(GBE_INI25590)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L1 in tract superior longitudinal fasciculus (L) neuroimaging measurement,
brain volume measurement
1,382
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001709/ScoringFiles/PGS001709.txt.gz
PGS001710
(GBE_INI25591)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L1 in tract superior longitudinal fasciculus (R) neuroimaging measurement,
brain volume measurement
534
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001710/ScoringFiles/PGS001710.txt.gz
PGS001711
(GBE_INI25592)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L1 in tract superior thalamic radiation (L) neuroimaging measurement,
brain volume measurement
457
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001711/ScoringFiles/PGS001711.txt.gz
PGS001712
(GBE_INI25593)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L1 in tract superior thalamic radiation (R) neuroimaging measurement,
brain volume measurement
358
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001712/ScoringFiles/PGS001712.txt.gz
PGS001713
(GBE_INI25594)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L1 in tract uncinate fasciculus (L) neuroimaging measurement,
brain volume measurement
173
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001713/ScoringFiles/PGS001713.txt.gz
PGS001714
(GBE_INI25597)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L2 in tract acoustic radiation (R) neuroimaging measurement,
brain volume measurement
993
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001714/ScoringFiles/PGS001714.txt.gz
PGS001715
(GBE_INI25598)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L2 in tract anterior thalamic radiation (L) neuroimaging measurement,
brain volume measurement
170
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001715/ScoringFiles/PGS001715.txt.gz
PGS001716
(GBE_INI25599)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L2 in tract anterior thalamic radiation (R) neuroimaging measurement,
brain volume measurement
290
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001716/ScoringFiles/PGS001716.txt.gz
PGS001717
(GBE_INI25600)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L2 in tract cingulate gyrus part of cingulum (L) neuroimaging measurement,
brain volume measurement
82
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001717/ScoringFiles/PGS001717.txt.gz
PGS001718
(GBE_INI25601)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L2 in tract cingulate gyrus part of cingulum (R) neuroimaging measurement,
brain volume measurement
305
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001718/ScoringFiles/PGS001718.txt.gz
PGS001719
(GBE_INI25606)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L2 in tract forceps major neuroimaging measurement,
brain volume measurement
924
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001719/ScoringFiles/PGS001719.txt.gz
PGS001720
(GBE_INI25607)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L2 in tract forceps minor neuroimaging measurement,
brain volume measurement
1,030
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001720/ScoringFiles/PGS001720.txt.gz
PGS001721
(GBE_INI25608)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L2 in tract inferior fronto-occipital fasciculus (L) neuroimaging measurement,
brain volume measurement
691
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001721/ScoringFiles/PGS001721.txt.gz
PGS001722
(GBE_INI25609)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L2 in tract inferior fronto-occipital fasciculus (R) neuroimaging measurement,
brain volume measurement
814
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001722/ScoringFiles/PGS001722.txt.gz
PGS001723
(GBE_INI25610)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L2 in tract inferior longitudinal fasciculus (L) neuroimaging measurement,
brain volume measurement
711
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001723/ScoringFiles/PGS001723.txt.gz
PGS001724
(GBE_INI25611)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L2 in tract inferior longitudinal fasciculus (R) neuroimaging measurement,
brain volume measurement
793
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001724/ScoringFiles/PGS001724.txt.gz
PGS001725
(GBE_INI25617)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L2 in tract superior longitudinal fasciculus (L) neuroimaging measurement,
brain volume measurement
1,749
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001725/ScoringFiles/PGS001725.txt.gz
PGS001726
(GBE_INI25619)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L2 in tract superior thalamic radiation (L) neuroimaging measurement,
brain volume measurement
683
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001726/ScoringFiles/PGS001726.txt.gz
PGS001727
(GBE_INI25621)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L2 in tract uncinate fasciculus (L) neuroimaging measurement,
brain volume measurement
709
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001727/ScoringFiles/PGS001727.txt.gz
PGS001728
(GBE_INI25622)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L2 in tract uncinate fasciculus (R) neuroimaging measurement,
brain volume measurement
706
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001728/ScoringFiles/PGS001728.txt.gz
PGS001729
(GBE_INI25624)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L3 in tract acoustic radiation (R) neuroimaging measurement,
brain volume measurement
794
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001729/ScoringFiles/PGS001729.txt.gz
PGS001730
(GBE_INI25625)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L3 in tract anterior thalamic radiation (L) neuroimaging measurement,
brain volume measurement
200
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001730/ScoringFiles/PGS001730.txt.gz
PGS001731
(GBE_INI25626)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L3 in tract anterior thalamic radiation (R) neuroimaging measurement,
brain volume measurement
432
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001731/ScoringFiles/PGS001731.txt.gz
PGS001732
(GBE_INI25627)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L3 in tract cingulate gyrus part of cingulum (L) neuroimaging measurement,
brain volume measurement
1,611
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001732/ScoringFiles/PGS001732.txt.gz
PGS001733
(GBE_INI25628)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
WA L3 in tract cingulate gyrus part of cingulum (R) neuroimaging measurement,
brain volume measurement
1,080
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001733/ScoringFiles/PGS001733.txt.gz