|
PGS Publication/Study ID (PGP) |
PGS Developed |
PGS Evaluated |
First Author | Title | Journal Name |
Publication Date |
Digital object identifier (doi) |
PubMed ID (PMID) |
|---|---|---|---|---|---|---|---|---|
| PGP000744 | 1 | 1 | Olowofela AS | Association of Genetic Predisposition to Inflammation With Cancer-Related Cognitive Impairment and Fatigue in Women Who Received Chemotherapy for Nonmetastatic Breast Cancer. | JCO Precis Oncol | 16/09/2025 | 10.1200/po-25-00303 | 40956996 |
| PGP000769 | 1 | 1 | Zhu J | Plasma Proteomic Biomarkers Underlying Polygenic Risk of Idiopathic Pulmonary Fibrosis. | Am J Respir Crit Care Med | 28/10/2025 | 10.1164/rccm.202505-1202rl | 41151026 |
| PGP000773 | 25 | 25 | Huerta-Chagoya A | Multi-ancestry polygenic risk scores for the prediction of type 2 diabetes and complications in diverse ancestries | medRxivPre | 23/07/2025 | 10.1101/2025.07.21.25331778 | 40778152 |
| PGP000771 | 5 | 5 | Tanha HM | Performance of different polygenic risk scores for breast cancer risk prediction: in-depth evaluations across large UK and Australian cohorts. | Eur J Hum Genet | 13/01/2026 | 10.1038/s41431-025-02003-8 | 41526671 |
| PGP000781 | 3 | 3 | Qu HQ | Sex specific genomic insights into type 1 diabetes through GWAS and single cell transcriptome analysis. | Diabetes Res Clin Pract | 20/02/2026 | 10.1016/j.diabres.2026.113181 | 41724362 |
| PGP000774 | 10 | 10 | Li JL | Improved polygenic risk prediction models for breast cancer subtypes in women of African ancestry. | Nat Genet | 02/02/2026 | 10.1038/s41588-026-02501-5 | 41629673 |
| Polygenic Score ID & Name | PGS Publication ID (PGP) | Reported Trait | Mapped Trait(s) (Ontology) | Number of Variants |
Ancestry distribution GWAS Dev Eval |
Scoring File (FTP Link) |
|---|---|---|---|---|---|---|
| PGS005251 (iPRS) |
PGP000744 | Olowofela AS et al. JCO Precis Oncol (2025) |
INFLA-Score | platelet count, C-reactive protein measurement, neutrophil-to-lymphocyte ratio, leukocyte quantity |
1,113 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005251/ScoringFiles/PGS005251.txt.gz |
| PGS005323 (PRS_CS_IPF) |
PGP000769 | Zhu J et al. Am J Respir Crit Care Med (2025) |
Idiopathic pulmonary fibrosis | idiopathic pulmonary fibrosis | 653,482 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005323/ScoringFiles/PGS005323.txt.gz |
| PGS005345 (SCT) |
PGP000771 | Tanha HM et al. Eur J Hum Genet (2026) |
Breast carcinoma | breast carcinoma | 435,538 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005345/ScoringFiles/PGS005345.txt.gz | |
| PGS005346 (LDpred2) |
PGP000771 | Tanha HM et al. Eur J Hum Genet (2026) |
Breast carcinoma | breast carcinoma | 961,355 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005346/ScoringFiles/PGS005346.txt.gz | |
| PGS005347 (PRS-CS) |
PGP000771 | Tanha HM et al. Eur J Hum Genet (2026) |
Breast carcinoma | breast carcinoma | 941,932 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005347/ScoringFiles/PGS005347.txt.gz | |
| PGS005348 (SBayesR) |
PGP000771 | Tanha HM et al. Eur J Hum Genet (2026) |
Breast carcinoma | breast carcinoma | 789,305 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005348/ScoringFiles/PGS005348.txt.gz |
| PGS005349 (SBayesRC) |
PGP000771 | Tanha HM et al. Eur J Hum Genet (2026) |
Breast carcinoma | breast carcinoma | 5,387,266 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005349/ScoringFiles/PGS005349.txt.gz |
| PGS005353 (DPRISM_T2DPRS_trainedforAFR_AFRweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 2,325,981 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005353/ScoringFiles/PGS005353.txt.gz | |
| PGS005354 (DPRISM_T2DPRS_trainedforAFR_AMRweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,642,045 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005354/ScoringFiles/PGS005354.txt.gz | |
| PGS005355 (DPRISM_T2DPRS_trainedforAFR_EASweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 981,210 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005355/ScoringFiles/PGS005355.txt.gz | |
| PGS005356 (DPRISM_T2DPRS_trainedforAFR_EURweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,333,977 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005356/ScoringFiles/PGS005356.txt.gz | |
| PGS005357 (DPRISM_T2DPRS_trainedforAFR_SASweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,257,227 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005357/ScoringFiles/PGS005357.txt.gz | |
| PGS005358 (DPRISM_T2DPRS_trainedforAMR_AFRweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,322,950 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005358/ScoringFiles/PGS005358.txt.gz | |
| PGS005359 (DPRISM_T2DPRS_trainedforAMR_AMRweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,427,746 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005359/ScoringFiles/PGS005359.txt.gz | |
| PGS005360 (DPRISM_T2DPRS_trainedforAMR_EASweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 941,393 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005360/ScoringFiles/PGS005360.txt.gz | |
| PGS005361 (DPRISM_T2DPRS_trainedforAMR_EURweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,262,174 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005361/ScoringFiles/PGS005361.txt.gz | |
| PGS005362 (DPRISM_T2DPRS_trainedforAMR_SASweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,191,714 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005362/ScoringFiles/PGS005362.txt.gz | |
| PGS005363 (DPRISM_T2DPRS_trainedforEAS_AFRweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 946,015 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005363/ScoringFiles/PGS005363.txt.gz | |
| PGS005364 (DPRISM_T2DPRS_trainedforEAS_AMRweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 980,079 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005364/ScoringFiles/PGS005364.txt.gz | |
| PGS005365 (DPRISM_T2DPRS_trainedforEAS_EASweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,009,254 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005365/ScoringFiles/PGS005365.txt.gz | |
| PGS005366 (DPRISM_T2DPRS_trainedforEAS_EURweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 929,716 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005366/ScoringFiles/PGS005366.txt.gz | |
| PGS005367 (DPRISM_T2DPRS_trainedforEAS_SASweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 976,035 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005367/ScoringFiles/PGS005367.txt.gz | |
| PGS005368 (DPRISM_T2DPRS_trainedforEUR_AFRweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,298,374 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005368/ScoringFiles/PGS005368.txt.gz | |
| PGS005369 (DPRISM_T2DPRS_trainedforEUR_AMRweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,388,666 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005369/ScoringFiles/PGS005369.txt.gz | |
| PGS005370 (DPRISM_T2DPRS_trainedforEUR_EASweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 942,728 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005370/ScoringFiles/PGS005370.txt.gz | |
| PGS005371 (DPRISM_T2DPRS_trainedforEUR_EURweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,444,665 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005371/ScoringFiles/PGS005371.txt.gz | |
| PGS005372 (DPRISM_T2DPRS_trainedforEUR_SASweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,257,165 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005372/ScoringFiles/PGS005372.txt.gz | |
| PGS005373 (DPRISM_T2DPRS_trainedforSAS_AFRweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,344,157 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005373/ScoringFiles/PGS005373.txt.gz | |
| PGS005374 (DPRISM_T2DPRS_trainedforSAS_AMRweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,419,570 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005374/ScoringFiles/PGS005374.txt.gz | |
| PGS005375 (DPRISM_T2DPRS_trainedforSAS_EASweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 983,905 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005375/ScoringFiles/PGS005375.txt.gz | |
| PGS005376 (DPRISM_T2DPRS_trainedforSAS_EURweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,386,504 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005376/ScoringFiles/PGS005376.txt.gz | |
| PGS005377 (DPRISM_T2DPRS_trainedforSAS_SASweights) |
PGP000773 | Huerta-Chagoya A et al. medRxiv (2025) |Pre |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,327,177 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005377/ScoringFiles/PGS005377.txt.gz | |
| PGS005378 (Overall_Prop_M1) |
PGP000774 | Li JL et al. Nat Genet (2026) |
Breast cancer | breast carcinoma | 2,321,840 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005378/ScoringFiles/PGS005378.txt.gz | |
| PGS005379 (Overall_Prop_M2) |
PGP000774 | Li JL et al. Nat Genet (2026) |
Breast cancer | breast carcinoma | 175,173 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005379/ScoringFiles/PGS005379.txt.gz | |
| PGS005380 (Erpos_M1) |
PGP000774 | Li JL et al. Nat Genet (2026) |
Estrogen-receptor positive breast cancer | estrogen-receptor positive breast cancer | 592,247 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005380/ScoringFiles/PGS005380.txt.gz | |
| PGS005381 (Erpos_M2) |
PGP000774 | Li JL et al. Nat Genet (2026) |
Estrogen-receptor positive breast cancer | estrogen-receptor positive breast cancer | 109,933 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005381/ScoringFiles/PGS005381.txt.gz | |
| PGS005382 (Erneg_M1) |
PGP000774 | Li JL et al. Nat Genet (2026) |
Estrogen-receptor negative breast cancer | estrogen-receptor negative breast cancer | 2,005,141 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005382/ScoringFiles/PGS005382.txt.gz | |
| PGS005383 (Erneg_M2) |
PGP000774 | Li JL et al. Nat Genet (2026) |
Estrogen-receptor negative breast cancer | estrogen-receptor negative breast cancer | 37,783 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005383/ScoringFiles/PGS005383.txt.gz | |
| PGS005384 (TNBC_M1) |
PGP000774 | Li JL et al. Nat Genet (2026) |
Triple-negative breast cancer | triple-negative breast cancer | 554,959 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005384/ScoringFiles/PGS005384.txt.gz | |
| PGS005385 (TNBC_M2) |
PGP000774 | Li JL et al. Nat Genet (2026) |
Triple-negative breast cancer | triple-negative breast cancer | 37,226 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005385/ScoringFiles/PGS005385.txt.gz | |
| PGS005386 (TNBC_162_M1) |
PGP000774 | Li JL et al. Nat Genet (2026) |
Triple-negative breast cancer | triple-negative breast cancer | 162 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005386/ScoringFiles/PGS005386.txt.gz | |
| PGS005387 (TNBC_162_M2) |
PGP000774 | Li JL et al. Nat Genet (2026) |
Triple-negative breast cancer | triple-negative breast cancer | 162 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005387/ScoringFiles/PGS005387.txt.gz | |
| PGS005398 (T1D_PRS_combined) |
PGP000781 | Qu HQ et al. Diabetes Res Clin Pract (2026) |
Type 1 diabetes (T1D) | type 1 diabetes mellitus | 645,391 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005398/ScoringFiles/PGS005398.txt.gz |
| PGS005399 (T1D_PRS_male) |
PGP000781 | Qu HQ et al. Diabetes Res Clin Pract (2026) |
Type 1 diabetes (T1D) | type 1 diabetes mellitus | 264,227 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005399/ScoringFiles/PGS005399.txt.gz |
| PGS005400 (T1D_PRS_female) |
PGP000781 | Qu HQ et al. Diabetes Res Clin Pract (2026) |
Type 1 diabetes (T1D) | type 1 diabetes mellitus | 128,279 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005400/ScoringFiles/PGS005400.txt.gz |