|
PGS Publication/Study ID (PGP) |
PGS Developed |
PGS Evaluated |
First Author | Title | Journal Name |
Publication Date |
Digital object identifier (doi) |
PubMed ID (PMID) |
|---|---|---|---|---|---|---|---|---|
| PGP000761 | 1 | 1 | Yuan S | Cross-population GWAS and proteomics improve risk prediction and reveal mechanisms in atrial fibrillation. | Nat Commun | 11/07/2025 | 10.1038/s41467-025-61720-2 | 40645996 |
| PGP000741 | 5 | 5 | Tanha HM | Polygenic risk scores for prostate cancer: Comparative evaluations in UK and Australian cohorts. | HGG Adv | 07/07/2025 | 10.1016/j.xhgg.2025.100477 | 40629691 |
| PGP000739 | 4 | 4 | Arehart CH | Modeling the genomic architecture of adiposity and anthropometrics across the lifespan. | Nat Commun | 13/08/2025 | 10.1038/s41467-025-62730-w | 40796553 |
| PGP000766 | 7 | 7 | Türkmen D | Polygenic scores for cardiovascular risk factors improve estimation of clinical outcomes in CCB treatment compared to pharmacogenetic variants alone. | Pharmacogenomics J | 17/04/2024 | 10.1038/s41397-024-00333-2 | 38632276 |
| PGP000767 | 0 | 2 | Beck JJ | Breast Cancer Polygenic Risk Score Validation and Effects of Variable Imputation. | Cancers (Basel) | 20/04/2024 | 10.3390/cancers16081578 | 38672660 |
| PGP000768 | 1 | 1 | Marston NA | Endothelial cell-related genetic variants identify LDL cholesterol-sensitive individuals who derive greater benefit from aggressive lipid lowering. | Nat Med | 26/02/2025 | 10.1038/s41591-025-03533-w | 40011692 |
| PGP000764 | 0 | 1 | Yang PK | Type 1 Diabetes Genetic Risk in 109,954 Veterans With Adult-Onset Diabetes: The Million Veteran Program (MVP). | Diabetes Care | 01/06/2024 | 10.2337/dc23-1927 | 38608262 |
| PGP000762 | 1 | 1 | Irvin MR | Polygenic Risk for Type 2 Diabetes in African Americans. | Diabetes | 01/06/2024 | 10.2337/db23-0232 | 38470993 |
| PGP000742 | 6 | 6 | Guo B G | Polygenic risk score for type 2 diabetes shows context-dependent effects across populations. | Nat Commun | 25/06/2025 | 10.1038/s41467-025-63546-4 | 41034193 |
| PGP000763 | 0 | 2 | Zou RS | Polygenic Scores and Preclinical Cardiovascular Disease in Individuals With HIV: Insights From the REPRIEVE Trial. | J Am Heart Assoc | 27/03/2024 | 10.1161/jaha.123.033413 | 38533953 |
| PGP000765 | 0 | 1 | Gandhi SE | Motor Complications in Parkinson's Disease: Results from 3343 Patients Followed for up to 12 Years. | Mov Disord Clin Pract | 08/04/2024 | 10.1002/mdc3.14044 | 38587023 |
| Polygenic Score ID & Name | PGS Publication ID (PGP) | Reported Trait | Mapped Trait(s) (Ontology) | Number of Variants |
Ancestry distribution GWAS Dev Eval |
Scoring File (FTP Link) |
|---|---|---|---|---|---|---|
| PGS005232 (F1_Birth_Size) |
PGP000739 | Arehart CH et al. Nat Commun (2025) |
Birth size | birth weight | 710,799 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005232/ScoringFiles/PGS005232.txt.gz |
| PGS005233 (F2_Abdominal_Size) |
PGP000739 | Arehart CH et al. Nat Commun (2025) |
Abdominal size | body fat distribution | 710,487 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005233/ScoringFiles/PGS005233.txt.gz |
| PGS005234 (F3_Body_Size_and_Adipose_Distribution) |
PGP000739 | Arehart CH et al. Nat Commun (2025) |
Body size and adipose distribution | body weight, body fat distribution |
709,193 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005234/ScoringFiles/PGS005234.txt.gz |
| PGS005235 (F4_Adiposity) |
PGP000739 | Arehart CH et al. Nat Commun (2025) |
Adiposity | obesity | 709,828 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005235/ScoringFiles/PGS005235.txt.gz |
| PGS005237 (SCT) |
PGP000741 | Tanha HM et al. HGG Adv (2025) |
Prostate carcinoma | prostate carcinoma | 517,551 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005237/ScoringFiles/PGS005237.txt.gz | |
| PGS005238 (LDpred2) |
PGP000741 | Tanha HM et al. HGG Adv (2025) |
Prostate carcinoma | prostate carcinoma | 964,607 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005238/ScoringFiles/PGS005238.txt.gz | |
| PGS005239 (PRS-CS) |
PGP000741 | Tanha HM et al. HGG Adv (2025) |
Prostate carcinoma | prostate carcinoma | 943,048 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005239/ScoringFiles/PGS005239.txt.gz | |
| PGS005240 (SBayesR) |
PGP000741 | Tanha HM et al. HGG Adv (2025) |
Prostate carcinoma | prostate carcinoma | 904,103 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005240/ScoringFiles/PGS005240.txt.gz |
| PGS005241 (SBayesRC) |
PGP000741 | Tanha HM et al. HGG Adv (2025) |
Prostate carcinoma | prostate carcinoma | 3,802,635 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005241/ScoringFiles/PGS005241.txt.gz |
| PGS005242 (T2D_PRS_PRS_CSx_META_T) |
PGP000742 | Guo B G et al. Nat Commun (2025) |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,257,036 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005242/ScoringFiles/PGS005242.txt.gz |
| PGS005243 (T2D_PRS_PRS_CSx_META_F_AFR) |
PGP000742 | Guo B G et al. Nat Commun (2025) |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,183,017 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005243/ScoringFiles/PGS005243.txt.gz |
| PGS005244 (T2D_PRS_PRS_CSx_META_F_AMR) |
PGP000742 | Guo B G et al. Nat Commun (2025) |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 960,470 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005244/ScoringFiles/PGS005244.txt.gz |
| PGS005245 (T2D_PRS_PRS_CSx_META_F_EAS) |
PGP000742 | Guo B G et al. Nat Commun (2025) |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,021,829 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005245/ScoringFiles/PGS005245.txt.gz |
| PGS005246 (T2D_PRS_PRS_CSx_META_F_EUR) |
PGP000742 | Guo B G et al. Nat Commun (2025) |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,111,848 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005246/ScoringFiles/PGS005246.txt.gz |
| PGS005247 (T2D_PRS_PRS_CSx_META_F_SAS) |
PGP000742 | Guo B G et al. Nat Commun (2025) |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,126,657 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005247/ScoringFiles/PGS005247.txt.gz |
| PGS005313 (AF_PGS_YuanS) |
PGP000761 | Yuan S et al. Nat Commun (2025) |
Atrial fibrillation | atrial fibrillation | 1,271,239 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005313/ScoringFiles/PGS005313.txt.gz |
| PGS005314 (T2D_PRS_AA) |
PGP000762 | Irvin MR et al. Diabetes (2024) |
Type 2 diabetes (T2D) | type 2 diabetes mellitus | 1,181,614 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005314/ScoringFiles/PGS005314.txt.gz |
| PGS005315 (ALM_PRS) |
PGP000766 | Türkmen D et al. Pharmacogenomics J (2024) |
Appendicular lean mass | lean body mass | 630 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005315/ScoringFiles/PGS005315.txt.gz |
| PGS005316 (BFM_PRS) |
PGP000766 | Türkmen D et al. Pharmacogenomics J (2024) |
Body fat mass | body fat distribution | 403 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005316/ScoringFiles/PGS005316.txt.gz |
| PGS005317 (DBP_PRS) |
PGP000766 | Türkmen D et al. Pharmacogenomics J (2024) |
Diastolic blood pressure | diastolic blood pressure | 297 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005317/ScoringFiles/PGS005317.txt.gz |
| PGS005318 (eGFR_PRS) |
PGP000766 | Türkmen D et al. Pharmacogenomics J (2024) |
eGFR | glomerular filtration rate | 49 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005318/ScoringFiles/PGS005318.txt.gz |
| PGS005319 (HF_PRS) |
PGP000766 | Türkmen D et al. Pharmacogenomics J (2024) |
Heart failure | heart failure | 12 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005319/ScoringFiles/PGS005319.txt.gz |
| PGS005320 (LPA_PRS) |
PGP000766 | Türkmen D et al. Pharmacogenomics J (2024) |
Lipoprotein (a) | lipoprotein A measurement | 36 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005320/ScoringFiles/PGS005320.txt.gz |
| PGS005321 (SBP_PRS) |
PGP000766 | Türkmen D et al. Pharmacogenomics J (2024) |
Systolic blood pressure | systolic blood pressure | 240 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005321/ScoringFiles/PGS005321.txt.gz |
| PGS005322 (PRS_EC) |
PGP000768 | Marston NA et al. Nat Med (2025) |
Coronary artery disease (Endothelial cell-related) | coronary artery disease | 36 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005322/ScoringFiles/PGS005322.txt.gz |