PGS Publication: PGP000520

Publication Information (EuropePMC)
Title Biobank-scale methods and projections for sparse polygenic prediction from machine learning.
PubMed ID 37468507(Europe PMC)
doi 10.1038/s41598-023-37580-5
Publication Date July 19, 2023
Journal Sci Rep
Author(s) Raben TG, Lello L, Widen E, Hsu SDH.
Released in PGS Catalog: Dec. 15, 2023

Associated Polygenic Score(s)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported

PGS Developed By This Publication

Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
Scoring File (FTP Link)
PGS004168
(bc_3)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Breast cancer breast carcinoma 4,618
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004168/ScoringFiles/PGS004168.txt.gz
PGS004174
(t1d_4)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Type 1 diabetes type 1 diabetes mellitus 49
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004174/ScoringFiles/PGS004174.txt.gz
PGS004180
(asthma_5)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Asthma asthma 3,641
-
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004180/ScoringFiles/PGS004180.txt.gz
PGS004181
(t2d_1)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Type 2 diabetes type 2 diabetes mellitus 10,202
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004181/ScoringFiles/PGS004181.txt.gz
PGS004186
(afib_1)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Atrial fibrillation atrial fibrillation 3,082
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004186/ScoringFiles/PGS004186.txt.gz
PGS004188
(afib_3)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Atrial fibrillation atrial fibrillation 2,420
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004188/ScoringFiles/PGS004188.txt.gz
PGS004201
(lpa_1)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Lipoprotein A lipoprotein A measurement 8,725
-
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004201/ScoringFiles/PGS004201.txt.gz
PGS004203
(lpa_3)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Lipoprotein A lipoprotein A measurement 6,935
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004203/ScoringFiles/PGS004203.txt.gz
PGS004208
(db_3)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Direct bilirubin bilirubin measurement 6,404
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004208/ScoringFiles/PGS004208.txt.gz
PGS004209
(db_4)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Direct bilirubin bilirubin measurement 2,507
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004209/ScoringFiles/PGS004209.txt.gz
PGS004213
(height_3)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Standing height body height 21,984
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004213/ScoringFiles/PGS004213.txt.gz
PGS004178
(asthma_3)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Asthma asthma 4,924
-
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004178/ScoringFiles/PGS004178.txt.gz
PGS004171
(t1d_1)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Type 1 diabetes type 1 diabetes mellitus 520
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004171/ScoringFiles/PGS004171.txt.gz
PGS004172
(t1d_2)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Type 1 diabetes type 1 diabetes mellitus 70
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004172/ScoringFiles/PGS004172.txt.gz
PGS004173
(t1d_3)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Type 1 diabetes type 1 diabetes mellitus 295
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004173/ScoringFiles/PGS004173.txt.gz
PGS004175
(t1d_5)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Type 1 diabetes type 1 diabetes mellitus 315
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004175/ScoringFiles/PGS004175.txt.gz
PGS004176
(asthma_1)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Asthma asthma 5,210
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004176/ScoringFiles/PGS004176.txt.gz
PGS004177
(asthma_2)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Asthma asthma 6,770
-
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004177/ScoringFiles/PGS004177.txt.gz
PGS004183
(t2d_3)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Type 2 diabetes type 2 diabetes mellitus 8,154
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004183/ScoringFiles/PGS004183.txt.gz
PGS004185
(t2d_5)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Type 2 diabetes type 2 diabetes mellitus 3,277
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004185/ScoringFiles/PGS004185.txt.gz
PGS004189
(afib_4)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Atrial fibrillation atrial fibrillation 3,434
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004189/ScoringFiles/PGS004189.txt.gz
PGS004212
(height_2)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Standing height body height 27,779
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004212/ScoringFiles/PGS004212.txt.gz
PGS004190
(afib_5)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Atrial fibrillation atrial fibrillation 1,972
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004190/ScoringFiles/PGS004190.txt.gz
PGS004191
(hyper_1)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Hypertension hypertension 23,280
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004191/ScoringFiles/PGS004191.txt.gz
PGS004192
(hyper_2)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Hypertension hypertension 9,430
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004192/ScoringFiles/PGS004192.txt.gz
PGS004193
(hyper_3)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Hypertension hypertension 18,580
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004193/ScoringFiles/PGS004193.txt.gz
PGS004194
(hyper_4)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Hypertension hypertension 14,063
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004194/ScoringFiles/PGS004194.txt.gz
PGS004195
(hyper_5)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Hypertension hypertension 2,755
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004195/ScoringFiles/PGS004195.txt.gz
PGS004204
(lpa_4)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Lipoprotein A lipoprotein A measurement 6,927
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004204/ScoringFiles/PGS004204.txt.gz
PGS004205
(lpa_5)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Lipoprotein A lipoprotein A measurement 8,737
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004205/ScoringFiles/PGS004205.txt.gz
PGS004206
(db_1)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Direct bilirubin bilirubin measurement 6,379
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004206/ScoringFiles/PGS004206.txt.gz
PGS004207
(db_2)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Direct bilirubin bilirubin measurement 7,438
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004207/ScoringFiles/PGS004207.txt.gz
PGS004210
(db_5)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Direct bilirubin bilirubin measurement 5,417
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004210/ScoringFiles/PGS004210.txt.gz
PGS004211
(height_1)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Standing height body height 21,950
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004211/ScoringFiles/PGS004211.txt.gz
PGS004214
(height_4)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Standing height body height 23,686
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004214/ScoringFiles/PGS004214.txt.gz
PGS004217
(bmi_2)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Body mass index body mass index 24,706
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004217/ScoringFiles/PGS004217.txt.gz
PGS004218
(bmi_3)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Body mass index body mass index 22,176
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004218/ScoringFiles/PGS004218.txt.gz
PGS004219
(bmi_4)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Body mass index body mass index 25,971
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004219/ScoringFiles/PGS004219.txt.gz
PGS004199
(cad_4)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Coronary artery disease coronary artery disease 6,085
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004199/ScoringFiles/PGS004199.txt.gz
PGS004216
(bmi_1)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Body mass index body mass index 24,059
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004216/ScoringFiles/PGS004216.txt.gz
PGS004220
(bmi_5)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Body mass index body mass index 24,026
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004220/ScoringFiles/PGS004220.txt.gz
PGS004166
(bc_1)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Breast cancer breast carcinoma 3,920
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004166/ScoringFiles/PGS004166.txt.gz
PGS004167
(bc_2)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Breast cancer breast carcinoma 717
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004167/ScoringFiles/PGS004167.txt.gz
PGS004169
(bc_4)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Breast cancer breast carcinoma 1,361
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004169/ScoringFiles/PGS004169.txt.gz
PGS004170
(bc_5)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Breast cancer breast carcinoma 2,278
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004170/ScoringFiles/PGS004170.txt.gz
PGS004179
(asthma_4)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Asthma asthma 3,963
-
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004179/ScoringFiles/PGS004179.txt.gz
PGS004182
(t2d_2)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Type 2 diabetes type 2 diabetes mellitus 10,778
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004182/ScoringFiles/PGS004182.txt.gz
PGS004184
(t2d_4)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Type 2 diabetes type 2 diabetes mellitus 9,645
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004184/ScoringFiles/PGS004184.txt.gz
PGS004187
(afib_2)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Atrial fibrillation atrial fibrillation 5,118
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004187/ScoringFiles/PGS004187.txt.gz
PGS004196
(cad_1)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Coronary artery disease coronary artery disease 3,892
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004196/ScoringFiles/PGS004196.txt.gz
PGS004197
(cad_2)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Coronary artery disease coronary artery disease 11,490
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004197/ScoringFiles/PGS004197.txt.gz
PGS004198
(cad_3)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Coronary artery disease coronary artery disease 5,723
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004198/ScoringFiles/PGS004198.txt.gz
PGS004200
(cad_5)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Coronary artery disease coronary artery disease 8,361
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004200/ScoringFiles/PGS004200.txt.gz
PGS004202
(lpa_2)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Lipoprotein A lipoprotein A measurement 8,714
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004202/ScoringFiles/PGS004202.txt.gz
PGS004215
(height_5)
PGP000520 |
Raben TG et al. Sci Rep (2023)
Standing height body height 22,938
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004215/ScoringFiles/PGS004215.txt.gz

Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

PGS Performance
Metric ID (PPM)
Evaluated Score PGS Sample Set ID
(PSS)
Performance Source Trait PGS Effect Sizes
(per SD change)
Classification Metrics Other Metrics Covariates Included in the Model PGS Performance:
Other Relevant Information
PPM020099 PGS004166
(bc_1)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Breast cancer AUROC: 0.64831 year of birth
PPM020100 PGS004167
(bc_2)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Breast cancer AUROC: 0.64213 year of birth
PPM020101 PGS004168
(bc_3)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Breast cancer AUROC: 0.64699 year of birth
PPM020102 PGS004169
(bc_4)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Breast cancer AUROC: 0.64504 year of birth
PPM020103 PGS004170
(bc_5)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Breast cancer AUROC: 0.64455 year of birth
PPM020104 PGS004171
(t1d_1)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Type 1 diabetes AUROC: 0.7 year of birth, sex
PPM020105 PGS004172
(t1d_2)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Type 1 diabetes AUROC: 0.71 year of birth, sex
PPM020106 PGS004173
(t1d_3)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Type 1 diabetes AUROC: 0.71 year of birth, sex
PPM020107 PGS004174
(t1d_4)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Type 1 diabetes AUROC: 0.71 year of birth, sex
PPM020108 PGS004175
(t1d_5)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Type 1 diabetes AUROC: 0.7 year of birth, sex
PPM020109 PGS004176
(asthma_1)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Asthma AUROC: 0.62651 year of birth, sex
PPM020110 PGS004176
(asthma_1)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Asthma AUROC: 0.62694 year of birth, sex
PPM020111 PGS004176
(asthma_1)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Asthma AUROC: 0.62779 year of birth, sex
PPM020112 PGS004176
(asthma_1)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Asthma AUROC: 0.62504 year of birth, sex
PPM020113 PGS004176
(asthma_1)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Asthma AUROC: 0.62557 year of birth, sex
PPM020115 PGS004182
(t2d_2)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Type 2 diabetes AUROC: 0.69491 year of birth, sex
PPM020116 PGS004183
(t2d_3)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Type 2 diabetes AUROC: 0.69959 year of birth, sex
PPM020117 PGS004184
(t2d_4)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Type 2 diabetes AUROC: 0.69539 year of birth, sex
PPM020118 PGS004185
(t2d_5)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Type 2 diabetes AUROC: 0.69924 year of birth, sex
PPM020119 PGS004186
(afib_1)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Atrial fibrillation AUROC: 0.73831 year of birth, sex
PPM020120 PGS004186
(afib_1)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Atrial fibrillation AUROC: 0.73501 year of birth, sex
PPM020121 PGS004187
(afib_2)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Atrial fibrillation AUROC: 0.74377 year of birth, sex
PPM020122 PGS004188
(afib_3)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Atrial fibrillation AUROC: 0.73914 year of birth, sex
PPM020123 PGS004189
(afib_4)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Atrial fibrillation AUROC: 0.74461 year of birth, sex
PPM020124 PGS004190
(afib_5)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Hypertension AUROC: 0.69573 year of birth, sex
PPM020126 PGS004192
(hyper_2)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Hypertension AUROC: 0.70254 year of birth, sex
PPM020127 PGS004193
(hyper_3)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Hypertension AUROC: 0.70358 year of birth, sex
PPM020128 PGS004194
(hyper_4)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Hypertension AUROC: 0.69503 year of birth, sex
PPM020129 PGS004195
(hyper_5)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Coronary artery disease AUROC: 0.75746 year of birth, sex
PPM020130 PGS004196
(cad_1)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Coronary artery disease AUROC: 0.74561 year of birth, sex
PPM020131 PGS004197
(cad_2)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Coronary artery disease AUROC: 0.75684 year of birth, sex
PPM020132 PGS004198
(cad_3)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Coronary artery disease AUROC: 0.75212 year of birth, sex
PPM020133 PGS004199
(cad_4)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Coronary artery disease AUROC: 0.75031 year of birth, sex
PPM020135 PGS004202
(lpa_2)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Lipoprotein A : 0.577 year of birth, sex
PPM020136 PGS004203
(lpa_3)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Lipoprotein A : 0.577 year of birth, sex
PPM020137 PGS004204
(lpa_4)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Lipoprotein A : 0.577 year of birth, sex
PPM020138 PGS004205
(lpa_5)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Lipoprotein A : 0.576 year of birth, sex
PPM020139 PGS004206
(db_1)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Direct bilirubin : 0.28979 year of birth, sex
PPM020140 PGS004207
(db_2)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Direct bilirubin : 0.28979 year of birth, sex
PPM020141 PGS004208
(db_3)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Direct bilirubin : 0.28979 year of birth, sex
PPM020142 PGS004209
(db_4)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Direct bilirubin : 0.28842 year of birth, sex
PPM020144 PGS004211
(height_1)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Standing height : 0.71113 year of birth, sex
PPM020145 PGS004212
(height_2)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Standing height : 0.71242 year of birth, sex
PPM020146 PGS004213
(height_3)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Standing height : 0.71113 year of birth, sex
PPM020147 PGS004214
(height_4)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Standing height : 0.71242 year of birth, sex
PPM020148 PGS004215
(height_5)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Standing height : 0.71242 year of birth, sex
PPM020149 PGS004216
(bmi_1)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Body mass index (weight/height) : 0.13038 year of birth, sex
PPM020150 PGS004217
(bmi_2)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Body mass index (weight/height) : 0.13102 year of birth, sex
PPM020152 PGS004219
(bmi_4)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Body mass index (weight/height) : 0.12915 year of birth, sex
PPM020153 PGS004220
(bmi_5)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Body mass index (weight/height) : 0.13038 year of birth, sex
PPM020114 PGS004181
(t2d_1)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Type 2 diabetes AUROC: 0.69418 year of birth, sex
PPM020125 PGS004191
(hyper_1)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Hypertension AUROC: 0.70167 year of birth, sex
PPM020134 PGS004200
(cad_5)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Lipoprotein A : 0.57648 year of birth, sex
PPM020143 PGS004210
(db_5)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Direct bilirubin : 0.28979 year of birth, sex
PPM020151 PGS004218
(bmi_3)
PSS011296|
European Ancestry|
45,334 individuals
PGP000520 |
Raben TG et al. Sci Rep (2023)
Reported Trait: Body mass index (weight/height) : 0.13038 year of birth, sex

Evaluated Samples

PGS Sample Set ID
(PSS)
Phenotype Definitions and Methods Participant Follow-up Time Sample Numbers Age of Study Participants Sample Ancestry Additional Ancestry Description Cohort(s) Additional Sample/Cohort Information
PSS011296 22,667 sibling pairs 45,334 individuals European UKB