Polygenic Score (PGS) ID: PGS012543

Predicted Trait
Reported Trait Chronic kidney disease
Mapped Trait(s) chronic kidney disease (MONDO_0005300)
Released in PGS Catalog: April 13, 2026
Download Score FTP directory
Terms and Licenses
PGS obtained from the Catalog should be cited appropriately, and used in accordance with any licensing restrictions set by the authors. See EBI Terms of Use (https://www.ebi.ac.uk/about/terms-of-use/) for additional details.

Score Details

Score Construction
PGS Name EN_model_CKD
Development Method
Name Multi-trait PRS
Parameters NR
Variants
Original Genome Build hg19
Number of Variants 969,768
Effect Weight Type NR
PGS Source
PGS Catalog Publication (PGP) ID PGP000790
Citation (link to publication) Hu J et al. Genet Med (2026)
Ancestry Distribution
Source of Variant
Associations (GWAS)
Multi-ancestry (including European): 100%
  • European
  • Not Reported
625,219 individuals (100%)
Score Development/Training
European: 100%
184,338 individuals (100%)
PGS Evaluation
European: 100%
1 Sample Sets

Development Samples

Source of Variant Associations (GWAS)
Study Identifiers Sample Numbers Sample Ancestry Cohort(s)
GWAS Catalog: GCST008064
Europe PMC: 31152163
 625,219 individuals European, NR NR
Score Development/Training
Study Identifiers Sample Numbers Sample Ancestry Cohort(s) Phenotype Definitions & Methods Age of Study Participants Participant Follow-up Time Additional Ancestry Description Additional Sample/Cohort Information
—
[
  • 13,257 cases
  • , 171,081 controls
]
 European UKB — — — — —

Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

PGS Performance
Metric ID (PPM) 		PGS Sample Set ID
(PSS) 		Performance Source Trait PGS Effect Sizes
(per SD change) 		Classification Metrics Other Metrics Covariates Included in the Model PGS Performance:
Other Relevant Information
PPM030649 PSS012217|
European Ancestry|
122,892 individuals
 PGP000790 |
Hu J et al. Genet Med (2026)
 Reported Trait: Chronic kidney disease OR: 1.36 [1.33, 1.39] AUROC: 0.58 [0.57, 0.58] — — —

Evaluated Samples

PGS Sample Set ID
(PSS) 		Phenotype Definitions and Methods Participant Follow-up Time Sample Numbers Age of Study Participants Sample Ancestry Additional Ancestry Description Cohort(s) Additional Sample/Cohort Information
PSS012217 — —
[
  • 8,919 cases
  • , 113,973 controls
]
 — European — UKB —