| Predicted Trait | |
| Reported Trait | Alzheimer's disease |
| Mapped Trait(s) | Alzheimer disease (MONDO_0004975) |
| Score Construction | |
| PGS Name | PRS94_AD |
| Development Method | |
| Name | Genome-wide significant SNPs |
| Parameters | p <5E-08, r2 < 0.1 |
| Variants | |
| Original Genome Build | NR |
| Number of Variants | 94 |
| Effect Weight Type | NR |
| PGS Source | |
| PGS Catalog Publication (PGP) ID | PGP000791 |
| Citation (link to publication) | Li Y et al. J Gerontol A Biol Sci Med Sci (2024) |
| Ancestry Distribution | |
| Source of Variant Associations (GWAS) | European: 100% 455,258 individuals (100%) |
| PGS Evaluation | European: 100% 1 Sample Sets |
| Study Identifiers | Sample Numbers | Sample Ancestry | Cohort(s) |
|---|---|---|---|
GWAS Catalog: GCST007320 Europe PMC: 30617256 |
455,258 individuals | European | NR |
|
PGS Performance Metric ID (PPM) |
PGS Sample Set ID (PSS) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
Classification Metrics | Other Metrics | Covariates Included in the Model |
PGS Performance: Other Relevant Information |
|---|---|---|---|---|---|---|---|---|
| PPM030654 | PSS012224| European Ancestry| 345,439 individuals |
PGP000791 | Li Y et al. J Gerontol A Biol Sci Med Sci (2024) |
Reported Trait: All-cause dementia | — | — | Hazard ratio (HR, high vs low tertile): 2.94 [2.68, 3.23] | age (5 years categories), sex, recruitment assessment center, genotyping array, first 10 principal components of ancestry, polysocial risk score | — |
| PPM030655 | PSS012224| European Ancestry| 345,439 individuals |
PGP000791 | Li Y et al. J Gerontol A Biol Sci Med Sci (2024) |
Reported Trait: Alzheimer's disease | — | — | Hazard ratio (HR, high vs low tertile): 4.71 [4.03, 5.5] | age (5 years categories), sex, recruitment assessment center, genotyping array, first 10 principal components of ancestry, polysocial risk score | — |
| PPM030656 | PSS012224| European Ancestry| 345,439 individuals |
PGP000791 | Li Y et al. J Gerontol A Biol Sci Med Sci (2024) |
Reported Trait: Vascular dementia | — | — | Hazard ratio (HR, high vs low tertile): 2.93 [2.4, 3.58] | age (5 years categories), sex, recruitment assessment center, genotyping array, first 10 principal components of ancestry, polysocial risk score | — |
|
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
|---|---|---|---|---|---|---|---|---|
| PSS012224 | — | Median = 12.5 years | 345,439 individuals, 47.6 % Male samples |
Mean = 56.4 years Sd = 8.0 years |
European | — | UKB | — |