| Publication Information (EuropePMC) | |
| Title | Polysocial and Polygenic Risk Scores and All-Cause Dementia, Alzheimer's Disease, and Vascular Dementia. |
| PubMed ID | 37966923(Europe PMC) |
| doi | 10.1093/gerona/glad262 |
| Publication Date | March 1, 2024 |
| Journal | J Gerontol A Biol Sci Med Sci |
| Author(s) | Li Y, Zeng Z, Zhuang Z, Zhao Y, Zhang L, Wang W, Song Z, Dong X, Xiao W, Huang N, Jia J, Liu Z, Qi L, Huang T. |
| Polygenic Score ID & Name | PGS Publication ID (PGP) | Reported Trait | Mapped Trait(s) (Ontology) | Number of Variants |
Ancestry distribution GWAS Dev Eval |
Scoring File (FTP Link) |
|---|---|---|---|---|---|---|
| PGS012548 (PRS94_AD) |
PGP000791 | Li Y et al. J Gerontol A Biol Sci Med Sci (2024) |
Alzheimer's disease | Alzheimer disease | 94 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012548/ScoringFiles/PGS012548.txt.gz |
|
PGS Performance Metric ID (PPM) |
Evaluated Score |
PGS Sample Set ID (PSS) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
Classification Metrics | Other Metrics | Covariates Included in the Model |
PGS Performance: Other Relevant Information |
|---|---|---|---|---|---|---|---|---|---|
| PPM030654 | PGS012548 (PRS94_AD) |
PSS012224| European Ancestry| 345,439 individuals |
PGP000791 | Li Y et al. J Gerontol A Biol Sci Med Sci (2024) |
Reported Trait: All-cause dementia | — | — | Hazard ratio (HR, high vs low tertile): 2.94 [2.68, 3.23] | age (5 years categories), sex, recruitment assessment center, genotyping array, first 10 principal components of ancestry, polysocial risk score | — |
| PPM030655 | PGS012548 (PRS94_AD) |
PSS012224| European Ancestry| 345,439 individuals |
PGP000791 | Li Y et al. J Gerontol A Biol Sci Med Sci (2024) |
Reported Trait: Alzheimer's disease | — | — | Hazard ratio (HR, high vs low tertile): 4.71 [4.03, 5.5] | age (5 years categories), sex, recruitment assessment center, genotyping array, first 10 principal components of ancestry, polysocial risk score | — |
| PPM030656 | PGS012548 (PRS94_AD) |
PSS012224| European Ancestry| 345,439 individuals |
PGP000791 | Li Y et al. J Gerontol A Biol Sci Med Sci (2024) |
Reported Trait: Vascular dementia | — | — | Hazard ratio (HR, high vs low tertile): 2.93 [2.4, 3.58] | age (5 years categories), sex, recruitment assessment center, genotyping array, first 10 principal components of ancestry, polysocial risk score | — |
|
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
|---|---|---|---|---|---|---|---|---|
| PSS012224 | — | Median = 12.5 years | 345,439 individuals, 47.6 % Male samples |
Mean = 56.4 years Sd = 8.0 years |
European | — | UKB | — |