| Predicted Trait | |
| Reported Trait | Excessive Daytime Sleepiness |
| Mapped Trait(s) | excessive daytime sleepiness measurement (EFO_0007875) |
| Additional Trait Information | Million Veteran Program phenotype: yes/no response to feeling excessively sleepy during the day, excluding regular naps; African ancestry-specific score. |
| Score Construction | |
| PGS Name | Excessive Daytime Sleepiness MVP AFR |
| Development Method | |
| Name | PRS-CSx |
| Parameters | Ancestry-specific posterior SNP effect sizes inferred using PRS-CSx; 1000 Genomes African LD reference panel for the AFR component; HapMap target variants on GRCh38; a=1, b=0.5, phi=auto; other parameters default; no clumping or P-value thresholding. |
| Variants | |
| Original Genome Build | GRCh38 |
| Number of Variants | 1,218,411 |
| Effect Weight Type | beta |
| PGS Source | |
| PGS Catalog Publication (PGP) ID | PGP000836 |
| Citation (link to publication) | Wyss AB et al. Sleep (2026) |
| Ancestry Distribution | |
| Source of Variant Associations (GWAS) | African: 100% 35,362 individuals (100%) |
| Study Identifiers | Sample Numbers | Sample Ancestry | Cohort(s) |
|---|---|---|---|
GWAS Catalog: GCST90479439 |
35,362 individuals | African American or Afro-Caribbean | MVP |
|
PGS Performance Metric ID (PPM) |
PGS Sample Set ID (PSS) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
Classification Metrics | Other Metrics | Covariates Included in the Model |
PGS Performance: Other Relevant Information |
|---|
|
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
|---|