Experimental Factor Ontology (EFO) Information | |
Identifier | EFO_0005763 |
Description | quantification of the difference between systolic blood pressure and diastolic blood pressure. Higher PP is associated with left ventricle hypertrophy and the increased intimal thickness of the carotid artery, which represent early target organ damage in cardiovascular diseases | Trait category |
Cardiovascular measurement
|
Polygenic Score ID & Name | PGS Publication ID (PGP) | Reported Trait | Mapped Trait(s) (Ontology) | Number of Variants | Ancestry distribution | Scoring File (FTP Link) |
---|---|---|---|---|---|---|
PGS003477 (LDPred2_PP) |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Pulse pressure | pulse pressure measurement | 847,747 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003477/ScoringFiles/PGS003477.txt.gz |
PGS Performance Metric ID (PPM) |
Evaluated Score |
PGS Sample Set ID (PSS) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
Classification Metrics | Other Metrics | Covariates Included in the Model |
PGS Performance: Other Relevant Information |
---|---|---|---|---|---|---|---|---|---|
PPM017287 | PGS003477 (LDPred2_PP) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Respiratory event index | β: -0.022 (0.01) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM017310 | PGS003477 (LDPred2_PP) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Obstructive sleep apnea | β: -0.032 (0.024) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM017354 | PGS003477 (LDPred2_PP) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Respiratory event index in obsese | β: -0.013 (0.017) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM017374 | PGS003477 (LDPred2_PP) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Obstructive sleep apnea in obsese | β: -0.012 (0.034) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM017375 | PGS003477 (LDPred2_PP) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Obstructive sleep apnea in non-obsese | β: -0.057 (0.035) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM017355 | PGS003477 (LDPred2_PP) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Respiratory event index in non-obsese | β: -0.024 (0.012) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM017399 | PGS003477 (LDPred2_PP) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Respiratory event index x obesity interaction | β: -0.001 (0.999) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM017409 | PGS003477 (LDPred2_PP) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Obstructive sleep apnea x obesity interaction | β: 1.028 (0.05) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
---|---|---|---|---|---|---|---|---|
PSS010185 | — | — | 1,115 individuals, 41.1 % Male samples |
Mean = 46.18 years | Hispanic or Latin American | — | HCHS, SOL | — |