Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS004550
(meta.M19.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M19 (Other arthrosis) joint disease 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004550/ScoringFiles/PGS004550.txt.gz
PGS004551
(meta.M20.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M20 (Acquired deformities of fingers and toes) congenital deformities of limbs 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004551/ScoringFiles/PGS004551.txt.gz
PGS004552
(meta.M23.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M23 (Internal derangement of knee) knee injury 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004552/ScoringFiles/PGS004552.txt.gz
PGS004553
(meta.M25.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M25 (Other joint disorders, not elsewhere classified) joint disease 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004553/ScoringFiles/PGS004553.txt.gz
PGS004554
(meta.M47.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M47 (Spondylosis) spondylosis 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004554/ScoringFiles/PGS004554.txt.gz
PGS004555
(meta.M48.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M48 (Other spondylopathies) spondylosis 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004555/ScoringFiles/PGS004555.txt.gz
PGS004556
(meta.M51.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M51 (Other intervertebral disk disorders) Intervertebral Disc Displacement 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004556/ScoringFiles/PGS004556.txt.gz
PGS004557
(meta.M54.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M54 (Dorsalgia) Back pain 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004557/ScoringFiles/PGS004557.txt.gz
PGS004558
(meta.M75.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M75 (Shoulder lesions) soft tissue disease 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004558/ScoringFiles/PGS004558.txt.gz
PGS004559
(meta.M79.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M79 (Other soft tissue disorders, not elsewhere classified) soft tissue disease 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004559/ScoringFiles/PGS004559.txt.gz
PGS004560
(meta.M81.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M81 (Osteoporosis without pathological fracture) osteoporosis 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004560/ScoringFiles/PGS004560.txt.gz
PGS004561
(meta.N17.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 N17 (Acute renal failure) acute kidney failure 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004561/ScoringFiles/PGS004561.txt.gz
PGS004562
(meta.N18.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 N18 (Chronic renal failure) kidney failure 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004562/ScoringFiles/PGS004562.txt.gz
PGS004563
(meta.N20.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 N20 (Calculus of kidney and ureter) nephrolithiasis 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004563/ScoringFiles/PGS004563.txt.gz
PGS004564
(meta.N39.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 N39 (Other disorders of urinary system) urinary system disease 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004564/ScoringFiles/PGS004564.txt.gz
PGS004565
(meta.osteoporosis.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Osteoporosis osteoporosis 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004565/ScoringFiles/PGS004565.txt.gz
PGS004566
(meta.R07.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 R07 (Pain in throat and chest) Chest pain 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004566/ScoringFiles/PGS004566.txt.gz
PGS004567
(meta.R10.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 R10 (Abdominal and pelvic pain) Abdominal pain 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004567/ScoringFiles/PGS004567.txt.gz
PGS004568
(meta.R55.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 R55 (Syncope and collapse) Syncope 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004568/ScoringFiles/PGS004568.txt.gz
PGS004569
(meta.T2D.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004569/ScoringFiles/PGS004569.txt.gz
PGS004570
(meta.T84.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 T84 (Complications of internal orthopaedic prosthetic devices, implants and grafts) device complication 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004570/ScoringFiles/PGS004570.txt.gz
PGS004571
(meta.VTE.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Venous thromboembolism (VTE) venous thromboembolism 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004571/ScoringFiles/PGS004571.txt.gz
PGS004572
(meta.Z53.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Z53 (Persons encountering health services for specifie procedures, not carried out) encounter with health service 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004572/ScoringFiles/PGS004572.txt.gz
PGS004573
(meta.Z72.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Z72 (Problems related to lifestyle) wellbeing measurement 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004573/ScoringFiles/PGS004573.txt.gz
PGS004574
(meta.Z82.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Z82 (Family history of certain disabilities and chronic diseases leading to disablement) family history 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004574/ScoringFiles/PGS004574.txt.gz
PGS004575
(meta.Z88.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Z88 (Personal history of allergy to drugs, medicaments and biologocal substances) clinical history 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004575/ScoringFiles/PGS004575.txt.gz
PGS004576
(meta.Z92.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Z92 (Personal history of medical treatment) clinical history 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004576/ScoringFiles/PGS004576.txt.gz
PGS004577
(meta.Z95.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Z95 (Presence of cardiac and vascular implants and grafts) medical procedure 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004577/ScoringFiles/PGS004577.txt.gz
PGS004578
(meta.Z96.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Z96 (Presence of other functional implants) medical procedure 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004578/ScoringFiles/PGS004578.txt.gz
PGS002840
(ExPRSweb_BMI_21001-irnt_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Body mass index (BMI) body mass index 1,062,550
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002840/ScoringFiles/PGS002840.txt.gz
PGS003588
(SBP)
 PGP000462 |
Honigberg MC et al. Nat Med (2023)
 Systolic blood pressure systolic blood pressure 1,064,898
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003588/ScoringFiles/PGS003588.txt.gz
PGS003328
(ExPRSweb_Insomnia_1200_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Insomnia insomnia 1,065,129
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003328/ScoringFiles/PGS003328.txt.gz
PGS004607
(AMD-MVP-AFR)
 PGP000582 |
Gorman BR et al. medRxiv (2022)
|Pre		 Age-related macular degeneration age-related macular degeneration 1,067,520
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004607/ScoringFiles/PGS004607.txt.gz
PGS003884
(BMI_PRScsx_ARB_AMRweights)
 PGP000501 |
Shim I et al. Nature Communications (2023)
 Body mass index (BMI) body mass index 1,067,771
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003884/ScoringFiles/PGS003884.txt.gz
PGS003888
(Height_PRScsx_ARB_AMRweights)
 PGP000501 |
Shim I et al. Nature Communications (2023)
 Height body height 1,067,771
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003888/ScoringFiles/PGS003888.txt.gz
PGS003870
(LDL_PRScsx_ARB_AMRweights)
 PGP000501 |
Shim I et al. Nature Communications (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,067,857
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003870/ScoringFiles/PGS003870.txt.gz
PGS003876
(HDL_PRScsx_ARB_AMRweights)
 PGP000501 |
Shim I et al. Nature Communications (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,067,858
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003876/ScoringFiles/PGS003876.txt.gz
PGS003867
(T2D_PRScs_ARB)
 PGP000501 |
Shim I et al. Nature Communications (2023)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 1,068,166
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003867/ScoringFiles/PGS003867.txt.gz
PGS003873
(LDL_PRScsx_ARB_EURweights)
 PGP000501 |
Shim I et al. Nature Communications (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,069,677
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003873/ScoringFiles/PGS003873.txt.gz
PGS003879
(HDL_PRScsx_ARB_EURweights)
 PGP000501 |
Shim I et al. Nature Communications (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,069,677
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003879/ScoringFiles/PGS003879.txt.gz
PGS000365
(PRSWEB_PHECODE150_C3-OESOPHAGUS_PRS-CS_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Esophageal cancer esophageal cancer 1,070,434
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000365/ScoringFiles/PGS000365.txt.gz
PGS003379
(PSA_PGS_CSx)
 PGP000412 |
Kachuri L et al. Nat Med (2023)
 Prostate-specific antigen (PSA) levels prostate specific antigen amount 1,071,278
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003379/ScoringFiles/PGS003379.txt.gz
PGS003982
(dbslmm.auto.GCST004773.T2D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 1,071,764
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003982/ScoringFiles/PGS003982.txt.gz
PGS004152
(UKBB_EnsPGS.GCST004773.T2D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 1,071,786
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004152/ScoringFiles/PGS004152.txt.gz
PGS000449
(PRSWEB_PHECODE172.21_20001-1073_PRS-CS_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Basal cell carcinoma basal cell carcinoma 1,073,162
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000449/ScoringFiles/PGS000449.txt.gz
PGS004081
(prscs.auto.GCST004131.IBD)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Inflammatory bowel disease (IBD) inflammatory bowel disease 1,073,268
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004081/ScoringFiles/PGS004081.txt.gz
PGS004097
(prscs.CV.GCST004131.IBD)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Inflammatory bowel disease (IBD) inflammatory bowel disease 1,073,268
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004097/ScoringFiles/PGS004097.txt.gz
PGS003362
(GSCAN_AgeSmk_2022_PRS_WEIGHTS_AMR)
 PGP000410 |
Saunders GRB et al. Nature (2022)
 Age of smoking initiation age at initiation of smoking 1,073,689
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003362/ScoringFiles/PGS003362.txt.gz
PGS004751
(current_smoker_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Current smoker smoking status measurement 1,076,735
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004751/ScoringFiles/PGS004751.txt.gz
PGS004687
(bladder_cancer)
 PGP000596 |
Hu J et al. JNCI Cancer Spectr (2024)
 Bladder cancer urinary bladder carcinoma 1,077,775
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004687/ScoringFiles/PGS004687.txt.gz
Showing 4151 to 4200 of 4857 rows