Trait: balding measurement

Experimental Factor Ontology (EFO) Information
Identifier EFO_0007825
Description quantification of the amount of balding in an individual
Trait category
Other measurement
Mapped term PMID:26926045

Associated Polygenic Score(s)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution Scoring File (FTP Link)
PGS001987
(portability-PLR_M_less_hair)
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Hair/balding pattern balding measurement 23,692
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001987/ScoringFiles/PGS001987.txt.gz
PGS002204
(portability-ldpred2_M_less_hair)
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Hair/balding pattern balding measurement 593,179
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002204/ScoringFiles/PGS002204.txt.gz

Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

PGS Performance
Metric ID (PPM)
Evaluated Score PGS Sample Set ID
(PSS)
Performance Source Trait PGS Effect Sizes
(per SD change)
Classification Metrics Other Metrics Covariates Included in the Model PGS Performance:
Other Relevant Information
PPM010771 PGS001987
(portability-PLR_M_less_hair)
PSS009379|
European Ancestry|
4,285 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern Partial Correlation (partial-r): 0.4662 [0.4424, 0.4894] sex, age, birth date, deprivation index, 16 PCs
PPM010772 PGS001987
(portability-PLR_M_less_hair)
PSS009153|
European Ancestry|
707 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern Partial Correlation (partial-r): 0.4184 [0.3547, 0.4782] sex, age, birth date, deprivation index, 16 PCs
PPM010773 PGS001987
(portability-PLR_M_less_hair)
PSS008707|
European Ancestry|
1,357 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern Partial Correlation (partial-r): 0.4335 [0.3889, 0.476] sex, age, birth date, deprivation index, 16 PCs
PPM010775 PGS001987
(portability-PLR_M_less_hair)
PSS008259|
South Asian Ancestry|
1,484 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern Partial Correlation (partial-r): 0.3074 [0.2602, 0.353] sex, age, birth date, deprivation index, 16 PCs
PPM010776 PGS001987
(portability-PLR_M_less_hair)
PSS008037|
East Asian Ancestry|
261 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern Partial Correlation (partial-r): 0.1958 [0.0715, 0.3142] sex, age, birth date, deprivation index, 16 PCs
PPM010777 PGS001987
(portability-PLR_M_less_hair)
PSS007823|
African Ancestry|
375 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern Partial Correlation (partial-r): 0.2977 [0.1998, 0.3897] sex, age, birth date, deprivation index, 16 PCs
PPM010778 PGS001987
(portability-PLR_M_less_hair)
PSS008927|
African Ancestry|
760 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern Partial Correlation (partial-r): 0.1792 [0.1086, 0.248] sex, age, birth date, deprivation index, 16 PCs
PPM010774 PGS001987
(portability-PLR_M_less_hair)
PSS008481|
Greater Middle Eastern Ancestry|
297 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern Partial Correlation (partial-r): 0.4018 [0.2983, 0.496] sex, age, birth date, deprivation index, 16 PCs
PPM012479 PGS002204
(portability-ldpred2_M_less_hair)
PSS009379|
European Ancestry|
4,285 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern Partial Correlation (partial-r): 0.4597 [0.4357, 0.483] sex, age, birth date, deprivation index, 16 PCs
PPM012480 PGS002204
(portability-ldpred2_M_less_hair)
PSS009153|
European Ancestry|
707 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern Partial Correlation (partial-r): 0.3947 [0.3296, 0.4559] sex, age, birth date, deprivation index, 16 PCs
PPM012481 PGS002204
(portability-ldpred2_M_less_hair)
PSS008707|
European Ancestry|
1,357 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern Partial Correlation (partial-r): 0.4151 [0.3697, 0.4585] sex, age, birth date, deprivation index, 16 PCs
PPM012483 PGS002204
(portability-ldpred2_M_less_hair)
PSS008259|
South Asian Ancestry|
1,484 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern Partial Correlation (partial-r): 0.3043 [0.257, 0.35] sex, age, birth date, deprivation index, 16 PCs
PPM012484 PGS002204
(portability-ldpred2_M_less_hair)
PSS008037|
East Asian Ancestry|
261 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern Partial Correlation (partial-r): 0.1848 [0.0601, 0.3039] sex, age, birth date, deprivation index, 16 PCs
PPM012485 PGS002204
(portability-ldpred2_M_less_hair)
PSS007823|
African Ancestry|
375 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern Partial Correlation (partial-r): 0.2965 [0.1985, 0.3886] sex, age, birth date, deprivation index, 16 PCs
PPM012486 PGS002204
(portability-ldpred2_M_less_hair)
PSS008927|
African Ancestry|
760 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern Partial Correlation (partial-r): 0.1836 [0.1131, 0.2523] sex, age, birth date, deprivation index, 16 PCs
PPM012482 PGS002204
(portability-ldpred2_M_less_hair)
PSS008481|
Greater Middle Eastern Ancestry|
297 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern Partial Correlation (partial-r): 0.376 [0.2703, 0.4727] sex, age, birth date, deprivation index, 16 PCs

Evaluated Samples

PGS Sample Set ID
(PSS)
Phenotype Definitions and Methods Participant Follow-up Time Sample Numbers Age of Study Participants Sample Ancestry Additional Ancestry Description Cohort(s) Additional Sample/Cohort Information
PSS008037 261 individuals East Asian China (East Asia) UKB
PSS009379 4,285 individuals European UK (+ Ireland) UKB
PSS007823 375 individuals African American or Afro-Caribbean Carribean UKB
PSS008707 1,357 individuals European Italy (South Europe) UKB
PSS008927 760 individuals African unspecified Nigeria (West Africa) UKB
PSS008481 297 individuals Greater Middle Eastern (Middle Eastern, North African or Persian) Iran (Middle East) UKB
PSS009153 707 individuals European Poland (NE Europe) UKB
PSS008259 1,484 individuals South Asian India (South Asia) UKB