Trait: reproductive behaviour measurement

Experimental Factor Ontology (EFO) Information
Identifier EFO_0007862
Description quantification of some aspect of reproductive behaviour such as age at first birth or number of children
Trait category
Other measurement
Mapped term PMID:27798627
Child trait(s) 3 child traits

Associated Polygenic Score(s)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Note: This table shows all PGS for "reproductive behaviour measurement" and any child terms of this trait in the EFO hierarchy by default.
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution Scoring File (FTP Link)
PGS001007
(GBE_INI2139)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Age at first sexual intercourse age at first sexual intercourse measurement 9,997
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001007/ScoringFiles/PGS001007.txt.gz
PGS001912
(portability-PLR_F_age_first_birth)
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Age at first live birth age at first birth measurement 15,201
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001912/ScoringFiles/PGS001912.txt.gz
PGS001938
(portability-PLR_log_age_first_sex)
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Age first had sexual intercourse age at first sexual intercourse measurement 64,164
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001938/ScoringFiles/PGS001938.txt.gz
PGS002127
(portability-ldpred2_F_age_first_birth)
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Age at first live birth age at first birth measurement 848,784
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002127/ScoringFiles/PGS002127.txt.gz
PGS002156
(portability-ldpred2_log_age_first_sex)
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Age first had sexual intercourse age at first sexual intercourse measurement 972,919
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002156/ScoringFiles/PGS002156.txt.gz
PGS002215
(portability-ldpred2_no_sex)
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Age first had sexual intercourse age at first sexual intercourse measurement 633,660
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002215/ScoringFiles/PGS002215.txt.gz
PGS002309
(repro_NumberChildrenEverBorn_Pooled.BOLT-LMM)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Number of children ever born number of children ever born measurement 1,109,311
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002309/ScoringFiles/PGS002309.txt.gz
PGS002317
(repro_ChildLess.BOLT-LMM)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Childless reproductive behaviour measurement 1,109,311
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002317/ScoringFiles/PGS002317.txt.gz
PGS002381
(repro_NumberChildrenEverBorn_Pooled.P+T.0.0001)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Number of children ever born number of children ever born measurement 1,639
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002381/ScoringFiles/PGS002381.txt.gz
PGS002389
(repro_ChildLess.P+T.0.0001)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Childless reproductive behaviour measurement 1,578
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002389/ScoringFiles/PGS002389.txt.gz
PGS002430
(repro_NumberChildrenEverBorn_Pooled.P+T.0.001)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Number of children ever born number of children ever born measurement 11,512
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002430/ScoringFiles/PGS002430.txt.gz
PGS002438
(repro_ChildLess.P+T.0.001)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Childless reproductive behaviour measurement 10,891
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002438/ScoringFiles/PGS002438.txt.gz
PGS002479
(repro_NumberChildrenEverBorn_Pooled.P+T.0.01)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Number of children ever born number of children ever born measurement 89,453
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002479/ScoringFiles/PGS002479.txt.gz
PGS002487
(repro_ChildLess.P+T.0.01)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Childless reproductive behaviour measurement 86,054
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002487/ScoringFiles/PGS002487.txt.gz
PGS002528
(repro_NumberChildrenEverBorn_Pooled.P+T.1e-06)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Number of children ever born number of children ever born measurement 66
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002528/ScoringFiles/PGS002528.txt.gz
PGS002536
(repro_ChildLess.P+T.1e-06)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Childless reproductive behaviour measurement 53
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002536/ScoringFiles/PGS002536.txt.gz
PGS002577
(repro_NumberChildrenEverBorn_Pooled.P+T.5e-08)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Number of children ever born number of children ever born measurement 21
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002577/ScoringFiles/PGS002577.txt.gz
PGS002585
(repro_ChildLess.P+T.5e-08)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Childless reproductive behaviour measurement 12
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002585/ScoringFiles/PGS002585.txt.gz
PGS002626
(repro_NumberChildrenEverBorn_Pooled.PolyFun-pred)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Number of children ever born number of children ever born measurement 208,715
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002626/ScoringFiles/PGS002626.txt.gz
PGS002634
(repro_ChildLess.PolyFun-pred)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Childless reproductive behaviour measurement 176,147
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002634/ScoringFiles/PGS002634.txt.gz
PGS002675
(repro_NumberChildrenEverBorn_Pooled.SBayesR)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Number of children ever born number of children ever born measurement 981,889
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002675/ScoringFiles/PGS002675.txt.gz
PGS002683
(repro_ChildLess.SBayesR)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Childless reproductive behaviour measurement 954,898
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002683/ScoringFiles/PGS002683.txt.gz
PGS003505
(cont-decay-F_age_first_birth)
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Age at first live birth age at first birth measurement 979,739
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003505/ScoringFiles/PGS003505.txt.gz
PGS003520
(cont-decay-log_age_first_sex)
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Age first had sexual intercourse age at first sexual intercourse measurement 979,739
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003520/ScoringFiles/PGS003520.txt.gz

Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

PGS Performance
Metric ID (PPM)
Evaluated Score PGS Sample Set ID
(PSS)
Performance Source Trait PGS Effect Sizes
(per SD change)
Classification Metrics Other Metrics Covariates Included in the Model PGS Performance:
Other Relevant Information
PPM007798 PGS001007
(GBE_INI2139)
PSS004951|
African Ancestry|
4,771 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Age first had sexual intercourse : 0.01638 [0.01026, 0.0225]
Incremental R2 (full-covars): -0.00625
PGS R2 (no covariates): 0.0 [-0.00008, 0.00008]
age, sex, UKB array type, Genotype PCs
PPM007799 PGS001007
(GBE_INI2139)
PSS004952|
East Asian Ancestry|
1,050 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Age first had sexual intercourse : 0.02181 [0.00812, 0.0355]
Incremental R2 (full-covars): -0.00042
PGS R2 (no covariates): 0.00235 [-0.00223, 0.00693]
age, sex, UKB array type, Genotype PCs
PPM007800 PGS001007
(GBE_INI2139)
PSS004953|
European Ancestry|
21,597 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Age first had sexual intercourse : 0.05384 [0.04839, 0.0593]
Incremental R2 (full-covars): 0.02018
PGS R2 (no covariates): 0.02045 [0.01697, 0.02393]
age, sex, UKB array type, Genotype PCs
PPM007801 PGS001007
(GBE_INI2139)
PSS004954|
South Asian Ancestry|
4,838 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Age first had sexual intercourse : 0.05962 [0.04945, 0.06979]
Incremental R2 (full-covars): 0.00524
PGS R2 (no covariates): 0.00685 [0.00321, 0.01049]
age, sex, UKB array type, Genotype PCs
PPM007802 PGS001007
(GBE_INI2139)
PSS004955|
European Ancestry|
59,599 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Age first had sexual intercourse : 0.06968 [0.06597, 0.07339]
Incremental R2 (full-covars): 0.02181
PGS R2 (no covariates): 0.0245 [0.02219, 0.0268]
age, sex, UKB array type, Genotype PCs
PPM010179 PGS001912
(portability-PLR_F_age_first_birth)
PSS009371|
European Ancestry|
3,989 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age at first live birth Partial Correlation (partial-r): 0.1321 [0.1014, 0.1625] sex, age, birth date, deprivation index, 16 PCs
PPM010180 PGS001912
(portability-PLR_F_age_first_birth)
PSS009145|
European Ancestry|
768 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age at first live birth Partial Correlation (partial-r): 0.1462 [0.0753, 0.2156] sex, age, birth date, deprivation index, 16 PCs
PPM010181 PGS001912
(portability-PLR_F_age_first_birth)
PSS008699|
European Ancestry|
1,149 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age at first live birth Partial Correlation (partial-r): 0.0667 [0.0084, 0.1245] sex, age, birth date, deprivation index, 16 PCs
PPM010182 PGS001912
(portability-PLR_F_age_first_birth)
PSS008473|
Greater Middle Eastern Ancestry|
157 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age at first live birth Partial Correlation (partial-r): 0.0391 [-0.1289, 0.2048] sex, age, birth date, deprivation index, 16 PCs
PPM010183 PGS001912
(portability-PLR_F_age_first_birth)
PSS008251|
South Asian Ancestry|
1,185 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age at first live birth Partial Correlation (partial-r): 0.0506 [-0.0069, 0.1077] sex, age, birth date, deprivation index, 16 PCs
PPM010185 PGS001912
(portability-PLR_F_age_first_birth)
PSS007815|
African Ancestry|
509 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age at first live birth Partial Correlation (partial-r): -0.0326 [-0.1209, 0.0561] sex, age, birth date, deprivation index, 16 PCs
PPM010186 PGS001912
(portability-PLR_F_age_first_birth)
PSS008919|
African Ancestry|
746 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age at first live birth Partial Correlation (partial-r): 0.0133 [-0.0595, 0.0859] sex, age, birth date, deprivation index, 16 PCs
PPM010184 PGS001912
(portability-PLR_F_age_first_birth)
PSS008029|
East Asian Ancestry|
314 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age at first live birth Partial Correlation (partial-r): -0.0059 [-0.12, 0.1084] sex, age, birth date, deprivation index, 16 PCs
PPM010379 PGS001938
(portability-PLR_log_age_first_sex)
PSS009437|
European Ancestry|
17,510 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.2244 [0.2103, 0.2384] sex, age, birth date, deprivation index, 16 PCs
PPM010381 PGS001938
(portability-PLR_log_age_first_sex)
PSS008765|
European Ancestry|
5,704 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.162 [0.1366, 0.1872] sex, age, birth date, deprivation index, 16 PCs
PPM010382 PGS001938
(portability-PLR_log_age_first_sex)
PSS008539|
Greater Middle Eastern Ancestry|
781 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.0725 [0.0014, 0.1428] sex, age, birth date, deprivation index, 16 PCs
PPM010383 PGS001938
(portability-PLR_log_age_first_sex)
PSS008317|
South Asian Ancestry|
3,788 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.1471 [0.1157, 0.1782] sex, age, birth date, deprivation index, 16 PCs
PPM010384 PGS001938
(portability-PLR_log_age_first_sex)
PSS008094|
East Asian Ancestry|
1,127 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.0776 [0.0188, 0.1359] sex, age, birth date, deprivation index, 16 PCs
PPM010385 PGS001938
(portability-PLR_log_age_first_sex)
PSS007881|
African Ancestry|
1,805 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.0537 [0.0073, 0.0999] sex, age, birth date, deprivation index, 16 PCs
PPM010386 PGS001938
(portability-PLR_log_age_first_sex)
PSS008985|
African Ancestry|
2,741 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.0705 [0.033, 0.1078] sex, age, birth date, deprivation index, 16 PCs
PPM010380 PGS001938
(portability-PLR_log_age_first_sex)
PSS009211|
European Ancestry|
3,425 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.1979 [0.1654, 0.2299] sex, age, birth date, deprivation index, 16 PCs
PPM011872 PGS002127
(portability-ldpred2_F_age_first_birth)
PSS009145|
European Ancestry|
768 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age at first live birth Partial Correlation (partial-r): 0.1972 [0.1273, 0.2652] sex, age, birth date, deprivation index, 16 PCs
PPM011871 PGS002127
(portability-ldpred2_F_age_first_birth)
PSS009371|
European Ancestry|
3,989 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age at first live birth Partial Correlation (partial-r): 0.1829 [0.1527, 0.2128] sex, age, birth date, deprivation index, 16 PCs
PPM011873 PGS002127
(portability-ldpred2_F_age_first_birth)
PSS008699|
European Ancestry|
1,149 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age at first live birth Partial Correlation (partial-r): 0.1779 [0.1208, 0.2338] sex, age, birth date, deprivation index, 16 PCs
PPM011874 PGS002127
(portability-ldpred2_F_age_first_birth)
PSS008473|
Greater Middle Eastern Ancestry|
157 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age at first live birth Partial Correlation (partial-r): 0.0501 [-0.118, 0.2154] sex, age, birth date, deprivation index, 16 PCs
PPM011875 PGS002127
(portability-ldpred2_F_age_first_birth)
PSS008251|
South Asian Ancestry|
1,185 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age at first live birth Partial Correlation (partial-r): 0.0625 [0.0051, 0.1195] sex, age, birth date, deprivation index, 16 PCs
PPM011876 PGS002127
(portability-ldpred2_F_age_first_birth)
PSS008029|
East Asian Ancestry|
314 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age at first live birth Partial Correlation (partial-r): -0.0711 [-0.1838, 0.0434] sex, age, birth date, deprivation index, 16 PCs
PPM011877 PGS002127
(portability-ldpred2_F_age_first_birth)
PSS007815|
African Ancestry|
509 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age at first live birth Partial Correlation (partial-r): 0.0076 [-0.081, 0.0961] sex, age, birth date, deprivation index, 16 PCs
PPM011878 PGS002127
(portability-ldpred2_F_age_first_birth)
PSS008919|
African Ancestry|
746 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age at first live birth Partial Correlation (partial-r): 0.0199 [-0.0529, 0.0925] sex, age, birth date, deprivation index, 16 PCs
PPM012097 PGS002156
(portability-ldpred2_log_age_first_sex)
PSS008765|
European Ancestry|
5,704 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.1716 [0.1463, 0.1967] sex, age, birth date, deprivation index, 16 PCs
PPM012098 PGS002156
(portability-ldpred2_log_age_first_sex)
PSS008539|
Greater Middle Eastern Ancestry|
781 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.0837 [0.0127, 0.1539] sex, age, birth date, deprivation index, 16 PCs
PPM012095 PGS002156
(portability-ldpred2_log_age_first_sex)
PSS009437|
European Ancestry|
17,510 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.2443 [0.2304, 0.2582] sex, age, birth date, deprivation index, 16 PCs
PPM012096 PGS002156
(portability-ldpred2_log_age_first_sex)
PSS009211|
European Ancestry|
3,425 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.2086 [0.1763, 0.2405] sex, age, birth date, deprivation index, 16 PCs
PPM012099 PGS002156
(portability-ldpred2_log_age_first_sex)
PSS008317|
South Asian Ancestry|
3,788 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.1587 [0.1274, 0.1897] sex, age, birth date, deprivation index, 16 PCs
PPM012100 PGS002156
(portability-ldpred2_log_age_first_sex)
PSS008094|
East Asian Ancestry|
1,127 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.0976 [0.0389, 0.1556] sex, age, birth date, deprivation index, 16 PCs
PPM012101 PGS002156
(portability-ldpred2_log_age_first_sex)
PSS007881|
African Ancestry|
1,805 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.0626 [0.0163, 0.1087] sex, age, birth date, deprivation index, 16 PCs
PPM012102 PGS002156
(portability-ldpred2_log_age_first_sex)
PSS008985|
African Ancestry|
2,741 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.0793 [0.0419, 0.1166] sex, age, birth date, deprivation index, 16 PCs
PPM012567 PGS002215
(portability-ldpred2_no_sex)
PSS009481|
European Ancestry|
17,730 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.0313 [0.0166, 0.046] sex, age, birth date, deprivation index, 16 PCs
PPM012570 PGS002215
(portability-ldpred2_no_sex)
PSS008583|
Greater Middle Eastern Ancestry|
792 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): -0.0493 [-0.1194, 0.0213] sex, age, birth date, deprivation index, 16 PCs
PPM012571 PGS002215
(portability-ldpred2_no_sex)
PSS008361|
South Asian Ancestry|
3,837 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): -0.0125 [-0.0442, 0.0192] sex, age, birth date, deprivation index, 16 PCs
PPM012572 PGS002215
(portability-ldpred2_no_sex)
PSS008138|
East Asian Ancestry|
1,146 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.015 [-0.0434, 0.0734] sex, age, birth date, deprivation index, 16 PCs
PPM012573 PGS002215
(portability-ldpred2_no_sex)
PSS007925|
African Ancestry|
1,855 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.012 [-0.0338, 0.0578] sex, age, birth date, deprivation index, 16 PCs
PPM012574 PGS002215
(portability-ldpred2_no_sex)
PSS009029|
African Ancestry|
2,796 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): -0.0112 [-0.0484, 0.026] sex, age, birth date, deprivation index, 16 PCs
PPM012568 PGS002215
(portability-ldpred2_no_sex)
PSS009255|
European Ancestry|
3,466 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.027 [-0.0064, 0.0603] sex, age, birth date, deprivation index, 16 PCs
PPM012569 PGS002215
(portability-ldpred2_no_sex)
PSS008809|
European Ancestry|
5,786 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Age first had sexual intercourse Partial Correlation (partial-r): 0.0161 [-0.0098, 0.0419] sex, age, birth date, deprivation index, 16 PCs
PPM013123 PGS002309
(repro_NumberChildrenEverBorn_Pooled.BOLT-LMM)
PSS009680|
East Asian Ancestry|
909 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0011 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013172 PGS002309
(repro_NumberChildrenEverBorn_Pooled.BOLT-LMM)
PSS009681|
European Ancestry|
43,069 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0082 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013221 PGS002309
(repro_NumberChildrenEverBorn_Pooled.BOLT-LMM)
PSS009682|
South Asian Ancestry|
7,846 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0032 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013074 PGS002309
(repro_NumberChildrenEverBorn_Pooled.BOLT-LMM)
PSS009679|
African Ancestry|
6,193 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0005 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013082 PGS002317
(repro_ChildLess.BOLT-LMM)
PSS009711|
African Ancestry|
6,193 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0026 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013131 PGS002317
(repro_ChildLess.BOLT-LMM)
PSS009712|
East Asian Ancestry|
909 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0066 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013180 PGS002317
(repro_ChildLess.BOLT-LMM)
PSS009713|
European Ancestry|
43,069 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0058 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013229 PGS002317
(repro_ChildLess.BOLT-LMM)
PSS009714|
South Asian Ancestry|
7,846 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.002 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013362 PGS002381
(repro_NumberChildrenEverBorn_Pooled.P+T.0.0001)
PSS009679|
African Ancestry|
6,193 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013411 PGS002381
(repro_NumberChildrenEverBorn_Pooled.P+T.0.0001)
PSS009680|
East Asian Ancestry|
909 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0013 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013460 PGS002381
(repro_NumberChildrenEverBorn_Pooled.P+T.0.0001)
PSS009681|
European Ancestry|
43,069 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0003 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013509 PGS002381
(repro_NumberChildrenEverBorn_Pooled.P+T.0.0001)
PSS009682|
South Asian Ancestry|
7,846 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013370 PGS002389
(repro_ChildLess.P+T.0.0001)
PSS009711|
African Ancestry|
6,193 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013419 PGS002389
(repro_ChildLess.P+T.0.0001)
PSS009712|
East Asian Ancestry|
909 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0032 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013468 PGS002389
(repro_ChildLess.P+T.0.0001)
PSS009713|
European Ancestry|
43,069 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0001 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013517 PGS002389
(repro_ChildLess.P+T.0.0001)
PSS009714|
South Asian Ancestry|
7,846 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0008 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013558 PGS002430
(repro_NumberChildrenEverBorn_Pooled.P+T.0.001)
PSS009679|
African Ancestry|
6,193 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: #Children Incremental R2 (full model vs. covariates alone): 0.0002 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013607 PGS002430
(repro_NumberChildrenEverBorn_Pooled.P+T.0.001)
PSS009680|
East Asian Ancestry|
909 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: #Children Incremental R2 (full model vs. covariates alone): 0.0006 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013656 PGS002430
(repro_NumberChildrenEverBorn_Pooled.P+T.0.001)
PSS009681|
European Ancestry|
43,069 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: #Children Incremental R2 (full model vs. covariates alone): 0.0002 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013705 PGS002430
(repro_NumberChildrenEverBorn_Pooled.P+T.0.001)
PSS009682|
South Asian Ancestry|
7,846 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: #Children Incremental R2 (full model vs. covariates alone): 0.0 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013566 PGS002438
(repro_ChildLess.P+T.0.001)
PSS009711|
African Ancestry|
6,193 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0002 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013664 PGS002438
(repro_ChildLess.P+T.0.001)
PSS009713|
European Ancestry|
43,069 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0002 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013713 PGS002438
(repro_ChildLess.P+T.0.001)
PSS009714|
South Asian Ancestry|
7,846 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.001 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013615 PGS002438
(repro_ChildLess.P+T.0.001)
PSS009712|
East Asian Ancestry|
909 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0008 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013754 PGS002479
(repro_NumberChildrenEverBorn_Pooled.P+T.0.01)
PSS009679|
African Ancestry|
6,193 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0009 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013852 PGS002479
(repro_NumberChildrenEverBorn_Pooled.P+T.0.01)
PSS009681|
European Ancestry|
43,069 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0005 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013901 PGS002479
(repro_NumberChildrenEverBorn_Pooled.P+T.0.01)
PSS009682|
South Asian Ancestry|
7,846 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013803 PGS002479
(repro_NumberChildrenEverBorn_Pooled.P+T.0.01)
PSS009680|
East Asian Ancestry|
909 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0042 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013762 PGS002487
(repro_ChildLess.P+T.0.01)
PSS009711|
African Ancestry|
6,193 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0002 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013811 PGS002487
(repro_ChildLess.P+T.0.01)
PSS009712|
East Asian Ancestry|
909 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0017 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013860 PGS002487
(repro_ChildLess.P+T.0.01)
PSS009713|
European Ancestry|
43,069 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0005 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013909 PGS002487
(repro_ChildLess.P+T.0.01)
PSS009714|
South Asian Ancestry|
7,846 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0004 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013950 PGS002528
(repro_NumberChildrenEverBorn_Pooled.P+T.1e-06)
PSS009679|
African Ancestry|
6,193 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013999 PGS002528
(repro_NumberChildrenEverBorn_Pooled.P+T.1e-06)
PSS009680|
East Asian Ancestry|
909 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0047 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014048 PGS002528
(repro_NumberChildrenEverBorn_Pooled.P+T.1e-06)
PSS009681|
European Ancestry|
43,069 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0002 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014097 PGS002528
(repro_NumberChildrenEverBorn_Pooled.P+T.1e-06)
PSS009682|
South Asian Ancestry|
7,846 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0004 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM013958 PGS002536
(repro_ChildLess.P+T.1e-06)
PSS009711|
African Ancestry|
6,193 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0001 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014007 PGS002536
(repro_ChildLess.P+T.1e-06)
PSS009712|
East Asian Ancestry|
909 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.001 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014056 PGS002536
(repro_ChildLess.P+T.1e-06)
PSS009713|
European Ancestry|
43,069 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0001 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014105 PGS002536
(repro_ChildLess.P+T.1e-06)
PSS009714|
South Asian Ancestry|
7,846 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0006 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014146 PGS002577
(repro_NumberChildrenEverBorn_Pooled.P+T.5e-08)
PSS009679|
African Ancestry|
6,193 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0006 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014195 PGS002577
(repro_NumberChildrenEverBorn_Pooled.P+T.5e-08)
PSS009680|
East Asian Ancestry|
909 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0023 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014244 PGS002577
(repro_NumberChildrenEverBorn_Pooled.P+T.5e-08)
PSS009681|
European Ancestry|
43,069 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0003 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014293 PGS002577
(repro_NumberChildrenEverBorn_Pooled.P+T.5e-08)
PSS009682|
South Asian Ancestry|
7,846 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0004 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014252 PGS002585
(repro_ChildLess.P+T.5e-08)
PSS009713|
European Ancestry|
43,069 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0001 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014154 PGS002585
(repro_ChildLess.P+T.5e-08)
PSS009711|
African Ancestry|
6,193 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014203 PGS002585
(repro_ChildLess.P+T.5e-08)
PSS009712|
East Asian Ancestry|
909 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0007 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014301 PGS002585
(repro_ChildLess.P+T.5e-08)
PSS009714|
South Asian Ancestry|
7,846 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0002 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014391 PGS002626
(repro_NumberChildrenEverBorn_Pooled.PolyFun-pred)
PSS009680|
East Asian Ancestry|
909 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model when combined with BOLT-LMM vs. covariates alone): 0.0011 age, sex, age*sex, assessment center, genotyping array, 10 PCs See repro_NumberChildrenEverBorn_Pooled.mixweights file at http://data.broadinstitute.org/alkesgroup/polypred_results for combination weights
PPM014440 PGS002626
(repro_NumberChildrenEverBorn_Pooled.PolyFun-pred)
PSS009681|
European Ancestry|
43,069 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model when combined with BOLT-LMM vs. covariates alone): 0.0082 age, sex, age*sex, assessment center, genotyping array, 10 PCs See repro_NumberChildrenEverBorn_Pooled.mixweights file at http://data.broadinstitute.org/alkesgroup/polypred_results for combination weights
PPM014489 PGS002626
(repro_NumberChildrenEverBorn_Pooled.PolyFun-pred)
PSS009682|
South Asian Ancestry|
7,846 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model when combined with BOLT-LMM vs. covariates alone): 0.003 age, sex, age*sex, assessment center, genotyping array, 10 PCs See repro_NumberChildrenEverBorn_Pooled.mixweights file at http://data.broadinstitute.org/alkesgroup/polypred_results for combination weights
PPM014342 PGS002626
(repro_NumberChildrenEverBorn_Pooled.PolyFun-pred)
PSS009679|
African Ancestry|
6,193 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model when combined with BOLT-LMM vs. covariates alone): 0.0005 age, sex, age*sex, assessment center, genotyping array, 10 PCs See repro_NumberChildrenEverBorn_Pooled.mixweights file at http://data.broadinstitute.org/alkesgroup/polypred_results for combination weights
PPM014399 PGS002634
(repro_ChildLess.PolyFun-pred)
PSS009712|
East Asian Ancestry|
909 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model when combined with BOLT-LMM vs. covariates alone): 0.0066 age, sex, age*sex, assessment center, genotyping array, 10 PCs See repro_ChildLess.mixweights file at http://data.broadinstitute.org/alkesgroup/polypred_results for combination weights
PPM014448 PGS002634
(repro_ChildLess.PolyFun-pred)
PSS009713|
European Ancestry|
43,069 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model when combined with BOLT-LMM vs. covariates alone): 0.0045 age, sex, age*sex, assessment center, genotyping array, 10 PCs See repro_ChildLess.mixweights file at http://data.broadinstitute.org/alkesgroup/polypred_results for combination weights
PPM014497 PGS002634
(repro_ChildLess.PolyFun-pred)
PSS009714|
South Asian Ancestry|
7,846 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model when combined with BOLT-LMM vs. covariates alone): 0.0022 age, sex, age*sex, assessment center, genotyping array, 10 PCs See repro_ChildLess.mixweights file at http://data.broadinstitute.org/alkesgroup/polypred_results for combination weights
PPM014350 PGS002634
(repro_ChildLess.PolyFun-pred)
PSS009711|
African Ancestry|
6,193 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model when combined with BOLT-LMM vs. covariates alone): 0.0 age, sex, age*sex, assessment center, genotyping array, 10 PCs See repro_ChildLess.mixweights file at http://data.broadinstitute.org/alkesgroup/polypred_results for combination weights
PPM014636 PGS002675
(repro_NumberChildrenEverBorn_Pooled.SBayesR)
PSS009681|
European Ancestry|
43,069 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0075 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014538 PGS002675
(repro_NumberChildrenEverBorn_Pooled.SBayesR)
PSS009679|
African Ancestry|
6,193 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0011 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014587 PGS002675
(repro_NumberChildrenEverBorn_Pooled.SBayesR)
PSS009680|
East Asian Ancestry|
909 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0017 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014685 PGS002675
(repro_NumberChildrenEverBorn_Pooled.SBayesR)
PSS009682|
South Asian Ancestry|
7,846 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Number of children ever born Incremental R2 (full model vs. covariates alone): 0.0032 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014546 PGS002683
(repro_ChildLess.SBayesR)
PSS009711|
African Ancestry|
6,193 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0023 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014595 PGS002683
(repro_ChildLess.SBayesR)
PSS009712|
East Asian Ancestry|
909 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0043 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014644 PGS002683
(repro_ChildLess.SBayesR)
PSS009713|
European Ancestry|
43,069 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0053 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM014693 PGS002683
(repro_ChildLess.SBayesR)
PSS009714|
South Asian Ancestry|
7,846 individuals
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Reported Trait: Childless Incremental R2 (full model vs. covariates alone): 0.0016 age, sex, age*sex, assessment center, genotyping array, 10 PCs
PPM017601 PGS003505
(cont-decay-F_age_first_birth)
PSS010614|
European Ancestry|
2,090 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age at first live birth partial-R2: 0.04 sex, age, deprivation index, PC1-16
PPM017433 PGS003505
(cont-decay-F_age_first_birth)
PSS010866|
European Ancestry|
7,313 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age at first live birth partial-R2: 0.05 sex, age, deprivation index, PC1-16
PPM017517 PGS003505
(cont-decay-F_age_first_birth)
PSS010782|
European Ancestry|
1,431 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age at first live birth partial-R2: 0.04 sex, age, deprivation index, PC1-16
PPM017769 PGS003505
(cont-decay-F_age_first_birth)
PSS010194|
European Ancestry|
857 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age at first live birth partial-R2: 0.02 sex, age, deprivation index, PC1-16
PPM017853 PGS003505
(cont-decay-F_age_first_birth)
PSS010446|
South Asian Ancestry|
2,150 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age at first live birth partial-R2: 0.01 sex, age, deprivation index, PC1-16
PPM017937 PGS003505
(cont-decay-F_age_first_birth)
PSS010362|
East Asian Ancestry|
586 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age at first live birth partial-R2: 0.01 sex, age, deprivation index, PC1-16
PPM018021 PGS003505
(cont-decay-F_age_first_birth)
PSS010278|
African Ancestry|
928 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age at first live birth partial-R2: 0.0 sex, age, deprivation index, PC1-16
PPM018105 PGS003505
(cont-decay-F_age_first_birth)
PSS010698|
African Ancestry|
1,421 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age at first live birth partial-R2: 0.0 sex, age, deprivation index, PC1-16
PPM017685 PGS003505
(cont-decay-F_age_first_birth)
PSS010530|
Greater Middle Eastern Ancestry|
292 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age at first live birth partial-R2: 0.01 sex, age, deprivation index, PC1-16
PPM017448 PGS003520
(cont-decay-log_age_first_sex)
PSS010883|
European Ancestry|
17,510 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age first had sexual intercourse partial-R2: 0.05 sex, age, deprivation index, PC1-16
PPM017532 PGS003520
(cont-decay-log_age_first_sex)
PSS010799|
European Ancestry|
3,426 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age first had sexual intercourse partial-R2: 0.04 sex, age, deprivation index, PC1-16
PPM017700 PGS003520
(cont-decay-log_age_first_sex)
PSS010547|
Greater Middle Eastern Ancestry|
781 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age first had sexual intercourse partial-R2: 0.0 sex, age, deprivation index, PC1-16
PPM017784 PGS003520
(cont-decay-log_age_first_sex)
PSS010211|
European Ancestry|
2,080 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age first had sexual intercourse partial-R2: 0.03 sex, age, deprivation index, PC1-16
PPM017868 PGS003520
(cont-decay-log_age_first_sex)
PSS010463|
South Asian Ancestry|
3,788 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age first had sexual intercourse partial-R2: 0.02 sex, age, deprivation index, PC1-16
PPM017952 PGS003520
(cont-decay-log_age_first_sex)
PSS010379|
East Asian Ancestry|
1,128 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age first had sexual intercourse partial-R2: 0.01 sex, age, deprivation index, PC1-16
PPM018036 PGS003520
(cont-decay-log_age_first_sex)
PSS010295|
African Ancestry|
1,805 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age first had sexual intercourse partial-R2: 0.0 sex, age, deprivation index, PC1-16
PPM018120 PGS003520
(cont-decay-log_age_first_sex)
PSS010715|
African Ancestry|
2,741 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age first had sexual intercourse partial-R2: 0.0 sex, age, deprivation index, PC1-16
PPM017616 PGS003520
(cont-decay-log_age_first_sex)
PSS010631|
European Ancestry|
5,575 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Age first had sexual intercourse partial-R2: 0.03 sex, age, deprivation index, PC1-16

Evaluated Samples

PGS Sample Set ID
(PSS)
Phenotype Definitions and Methods Participant Follow-up Time Sample Numbers Age of Study Participants Sample Ancestry Additional Ancestry Description Cohort(s) Additional Sample/Cohort Information
PSS010782 1,431 individuals,
0.0 % Male samples
Mean = 55.4 years
Sd = 7.4 years
European Polish UKB
PSS009029 2,796 individuals African unspecified Nigeria (West Africa) UKB
PSS010530 292 individuals,
0.0 % Male samples
Mean = 53.0 years
Sd = 8.1 years
Greater Middle Eastern (Middle Eastern, North African or Persian) Iranian UKB
PSS007881 1,805 individuals African American or Afro-Caribbean Carribean UKB
PSS008138 1,146 individuals East Asian China (East Asia) UKB
PSS010278 928 individuals,
0.0 % Male samples
Mean = 53.9 years
Sd = 7.9 years
African American or Afro-Caribbean Caribbean UKB
PSS010799 3,426 individuals,
38.0 % Male samples
Mean = 54.2 years
Sd = 7.5 years
European Polish UKB
PSS008919 746 individuals African unspecified Nigeria (West Africa) UKB
PSS010547 781 individuals,
60.0 % Male samples
Mean = 52.6 years
Sd = 7.9 years
Greater Middle Eastern (Middle Eastern, North African or Persian) Iranian UKB
PSS008539 781 individuals Greater Middle Eastern (Middle Eastern, North African or Persian) Iran (Middle East) UKB
PSS009437 17,510 individuals European UK (+ Ireland) UKB
PSS008029 314 individuals East Asian China (East Asia) UKB
PSS004951 4,771 individuals African unspecified UKB
PSS004952 1,050 individuals East Asian UKB
PSS004953 21,597 individuals European non-white British ancestry UKB
PSS004954 4,838 individuals South Asian UKB
PSS004955 59,599 individuals European white British ancestry UKB Testing cohort (heldout set)
PSS010295 1,805 individuals,
36.0 % Male samples
Mean = 51.7 years
Sd = 7.7 years
African American or Afro-Caribbean Caribbean UKB
PSS008809 5,786 individuals European Italy (South Europe) UKB
PSS010698 1,421 individuals,
0.0 % Male samples
Mean = 53.2 years
Sd = 8.1 years
African unspecified Nigerian UKB
PSS010446 2,150 individuals,
0.0 % Male samples
Mean = 53.4 years
Sd = 8.0 years
South Asian Indian UKB
PSS007925 1,855 individuals African American or Afro-Caribbean Carribean UKB
PSS010194 857 individuals,
0.0 % Male samples
Mean = 58.5 years
Sd = 6.8 years
European Ashkenazi UKB
PSS008699 1,149 individuals European Italy (South Europe) UKB
PSS009211 3,425 individuals European Poland (NE Europe) UKB
PSS008317 3,788 individuals South Asian India (South Asia) UKB
PSS010715 2,741 individuals,
48.0 % Male samples
Mean = 51.1 years
Sd = 7.7 years
African unspecified Nigerian UKB
PSS010463 3,788 individuals,
58.0 % Male samples
Mean = 52.4 years
Sd = 8.3 years
South Asian Indian UKB
PSS007815 509 individuals African American or Afro-Caribbean Carribean UKB
PSS008583 792 individuals Greater Middle Eastern (Middle Eastern, North African or Persian) Iran (Middle East) UKB
PSS009481 17,730 individuals European UK (+ Ireland) UKB
PSS009680 909 individuals East Asian UKB
PSS009681 43,069 individuals European Non-British European UKB
PSS009682 7,846 individuals South Asian UKB
PSS009679 6,193 individuals African unspecified UKB
PSS010211 2,080 individuals,
45.0 % Male samples
Mean = 58.0 years
Sd = 7.1 years
European Ashkenazi UKB
PSS010866 7,313 individuals,
0.0 % Male samples
Mean = 57.6 years
Sd = 7.5 years
European white British UKB
PSS008473 157 individuals Greater Middle Eastern (Middle Eastern, North African or Persian) Iran (Middle East) UKB
PSS008985 2,741 individuals African unspecified Nigeria (West Africa) UKB
PSS009371 3,989 individuals European UK (+ Ireland) UKB
PSS010614 2,090 individuals,
0.0 % Male samples
Mean = 55.5 years
Sd = 8.1 years
European Italian UKB
PSS008094 1,127 individuals East Asian China (East Asia) UKB
PSS010362 586 individuals,
0.0 % Male samples
Mean = 53.5 years
Sd = 7.5 years
East Asian Chinese UKB
PSS009255 3,466 individuals European Poland (NE Europe) UKB
PSS009711 6,193 individuals African unspecified UKB
PSS008361 3,837 individuals South Asian India (South Asia) UKB
PSS009712 909 individuals East Asian UKB
PSS009713 43,069 individuals European Non-British European UKB
PSS009714 7,846 individuals South Asian UKB
PSS010883 17,510 individuals,
46.0 % Male samples
Mean = 56.5 years
Sd = 7.9 years
European white British UKB
PSS010631 5,575 individuals,
45.0 % Male samples
Mean = 54.2 years
Sd = 8.3 years
European Italian UKB
PSS010379 1,128 individuals,
36.0 % Male samples
Mean = 51.7 years
Sd = 7.7 years
East Asian Chinese UKB
PSS009145 768 individuals European Poland (NE Europe) UKB
PSS008251 1,185 individuals South Asian India (South Asia) UKB
PSS008765 5,704 individuals European Italy (South Europe) UKB