Trait: educational attainment

Experimental Factor Ontology (EFO) Information
Identifier EFO_0011015
Description A measure of academic performance through educational benchmarks such as national exams and curriculum assessments.
Trait category
Other measurement
Synonym academic attainment
Mapped term PMID:33594131

Associated Polygenic Score(s)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution Scoring File (FTP Link)
PGS002012
(portability-PLR_years_of_edu)
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Qualifications (years of education) educational attainment 50,413
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002012/ScoringFiles/PGS002012.txt.gz
PGS002231
(portability-ldpred2_years_of_edu)
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Qualifications (years of education) educational attainment 950,845
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002231/ScoringFiles/PGS002231.txt.gz

Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

PGS Performance
Metric ID (PPM)
Evaluated Score PGS Sample Set ID
(PSS)
Performance Source Trait PGS Effect Sizes
(per SD change)
Classification Metrics Other Metrics Covariates Included in the Model PGS Performance:
Other Relevant Information
PPM010970 PGS002012
(portability-PLR_years_of_edu)
PSS009497|
European Ancestry|
16,350 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Qualifications (years of education) Partial Correlation (partial-r): 0.1752 [0.1603, 0.19] sex, age, birth date, deprivation index, 16 PCs
PPM010971 PGS002012
(portability-PLR_years_of_edu)
PSS009271|
European Ancestry|
3,619 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Qualifications (years of education) Partial Correlation (partial-r): 0.1351 [0.1029, 0.167] sex, age, birth date, deprivation index, 16 PCs
PPM010973 PGS002012
(portability-PLR_years_of_edu)
PSS008599|
Greater Middle Eastern Ancestry|
957 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Qualifications (years of education) Partial Correlation (partial-r): 0.0796 [0.0156, 0.1429] sex, age, birth date, deprivation index, 16 PCs
PPM010974 PGS002012
(portability-PLR_years_of_edu)
PSS008377|
South Asian Ancestry|
4,749 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Qualifications (years of education) Partial Correlation (partial-r): 0.0946 [0.0662, 0.1227] sex, age, birth date, deprivation index, 16 PCs
PPM010975 PGS002012
(portability-PLR_years_of_edu)
PSS008153|
East Asian Ancestry|
1,520 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Qualifications (years of education) Partial Correlation (partial-r): 0.0155 [-0.0352, 0.066] sex, age, birth date, deprivation index, 16 PCs
PPM010976 PGS002012
(portability-PLR_years_of_edu)
PSS007941|
African Ancestry|
1,949 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Qualifications (years of education) Partial Correlation (partial-r): 0.0297 [-0.0149, 0.0742] sex, age, birth date, deprivation index, 16 PCs
PPM010977 PGS002012
(portability-PLR_years_of_edu)
PSS009045|
African Ancestry|
3,278 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Qualifications (years of education) Partial Correlation (partial-r): 0.028 [-0.0063, 0.0623] sex, age, birth date, deprivation index, 16 PCs
PPM010972 PGS002012
(portability-PLR_years_of_edu)
PSS008825|
European Ancestry|
5,612 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Qualifications (years of education) Partial Correlation (partial-r): 0.1582 [0.1326, 0.1837] sex, age, birth date, deprivation index, 16 PCs
PPM012694 PGS002231
(portability-ldpred2_years_of_edu)
PSS009497|
European Ancestry|
16,350 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Qualifications (years of education) Partial Correlation (partial-r): 0.2008 [0.186, 0.2154] sex, age, birth date, deprivation index, 16 PCs
PPM012695 PGS002231
(portability-ldpred2_years_of_edu)
PSS009271|
European Ancestry|
3,619 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Qualifications (years of education) Partial Correlation (partial-r): 0.1451 [0.113, 0.177] sex, age, birth date, deprivation index, 16 PCs
PPM012696 PGS002231
(portability-ldpred2_years_of_edu)
PSS008825|
European Ancestry|
5,612 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Qualifications (years of education) Partial Correlation (partial-r): 0.1772 [0.1517, 0.2025] sex, age, birth date, deprivation index, 16 PCs
PPM012697 PGS002231
(portability-ldpred2_years_of_edu)
PSS008599|
Greater Middle Eastern Ancestry|
957 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Qualifications (years of education) Partial Correlation (partial-r): 0.0708 [0.0068, 0.1342] sex, age, birth date, deprivation index, 16 PCs
PPM012698 PGS002231
(portability-ldpred2_years_of_edu)
PSS008377|
South Asian Ancestry|
4,749 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Qualifications (years of education) Partial Correlation (partial-r): 0.1169 [0.0887, 0.1449] sex, age, birth date, deprivation index, 16 PCs
PPM012699 PGS002231
(portability-ldpred2_years_of_edu)
PSS008153|
East Asian Ancestry|
1,520 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Qualifications (years of education) Partial Correlation (partial-r): 0.0602 [0.0096, 0.1105] sex, age, birth date, deprivation index, 16 PCs
PPM012700 PGS002231
(portability-ldpred2_years_of_edu)
PSS007941|
African Ancestry|
1,949 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Qualifications (years of education) Partial Correlation (partial-r): 0.0494 [0.0048, 0.0938] sex, age, birth date, deprivation index, 16 PCs
PPM012701 PGS002231
(portability-ldpred2_years_of_edu)
PSS009045|
African Ancestry|
3,278 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Qualifications (years of education) Partial Correlation (partial-r): 0.0209 [-0.0134, 0.0552] sex, age, birth date, deprivation index, 16 PCs

Evaluated Samples

PGS Sample Set ID
(PSS)
Phenotype Definitions and Methods Participant Follow-up Time Sample Numbers Age of Study Participants Sample Ancestry Additional Ancestry Description Cohort(s) Additional Sample/Cohort Information
PSS007941 1,949 individuals African American or Afro-Caribbean Carribean UKB
PSS009045 3,278 individuals African unspecified Nigeria (West Africa) UKB
PSS009271 3,619 individuals European Poland (NE Europe) UKB
PSS008599 957 individuals Greater Middle Eastern (Middle Eastern, North African or Persian) Iran (Middle East) UKB
PSS008377 4,749 individuals South Asian India (South Asia) UKB
PSS008153 1,520 individuals East Asian China (East Asia) UKB
PSS009497 16,350 individuals European UK (+ Ireland) UKB
PSS008825 5,612 individuals European Italy (South Europe) UKB