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PGS Catalog
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Polygenic Scores (PGS)
Polygenic Scores (PGS)
Filter PGS by Participant Ancestry
Individuals included in:
Any Stage [G, D, E]
All Stages combined [G + D + E]
Development [G, D]
- GWAS [G]
- Score development [D]
PGS Evaluation [E]
G
- Source of Variant Associations (
G
WAS)
D
- Score
D
evelopment/Training
E
- PGS
E
valuation
List of ancestries includes:
--
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Display options:
Show European ancestry data
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only
Multi-ancestry data
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name
PGS Publication ID
(PGP)
Reported Trait
Mapped Trait(s)
(Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File
(FTP Link)
PGS002831
(ExPRSweb_Alcohol_DrinksPerWeek_PT_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Alcohol consumption
alcohol consumption measurement
12,650
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002831/ScoringFiles/PGS002831.txt.gz
PGS002832
(ExPRSweb_Alcohol_DrinksPerWeek_PLINK_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Alcohol consumption
alcohol consumption measurement
27,085
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002832/ScoringFiles/PGS002832.txt.gz
PGS002833
(ExPRSweb_Alcohol_DrinksPerWeek_DBSLMM_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Alcohol consumption
alcohol consumption measurement
232
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002833/ScoringFiles/PGS002833.txt.gz
PGS002834
(ExPRSweb_Alcohol_DrinksPerWeek_PRSCS_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Alcohol consumption
alcohol consumption measurement
1,116,497
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002834/ScoringFiles/PGS002834.txt.gz
PGS002835
(ExPRSweb_Alcohol_DrinksPerWeek_LASSOSUM_UKB_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Alcohol consumption
alcohol consumption measurement
524,875
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002835/ScoringFiles/PGS002835.txt.gz
PGS002836
(ExPRSweb_Alcohol_DrinksPerWeek_PT_UKB_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Alcohol consumption
alcohol consumption measurement
10,706
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002836/ScoringFiles/PGS002836.txt.gz
PGS002837
(ExPRSweb_Alcohol_DrinksPerWeek_PLINK_UKB_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Alcohol consumption
alcohol consumption measurement
22,675
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002837/ScoringFiles/PGS002837.txt.gz
PGS002838
(ExPRSweb_Alcohol_DrinksPerWeek_DBSLMM_UKB_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Alcohol consumption
alcohol consumption measurement
137
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002838/ScoringFiles/PGS002838.txt.gz
PGS002839
(ExPRSweb_Alcohol_DrinksPerWeek_PRSCS_UKB_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Alcohol consumption
alcohol consumption measurement
1,117,376
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002839/ScoringFiles/PGS002839.txt.gz
PGS000203
(GSCAN_DPW_COGA)
PGP000084
|
Barr PB
et al.
Transl Psychiatry (2020)
Alcohol consumption (drinks per week)
alcohol consumption measurement
1,110,910
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000203/ScoringFiles/PGS000203.txt.gz
PGS000204
(GSCAN_DPW_FT12)
PGP000084
|
Barr PB
et al.
Transl Psychiatry (2020)
Alcohol consumption (drinks per week)
alcohol consumption measurement
1,099,480
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000204/ScoringFiles/PGS000204.txt.gz
PGS002752
(Drinks_per_week_prscs)
PGP000364
|
Mars N
et al.
Am J Hum Genet (2022)
Alcohol consumption (drinks per week)
alcohol consumption measurement
1,089,551
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002752/ScoringFiles/PGS002752.txt.gz
PGS001901
(portability-PLR_drink_alcohol)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Alcohol drinker status
alcohol drinking
1,065
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001901/ScoringFiles/PGS001901.txt.gz
PGS002115
(portability-ldpred2_drink_alcohol)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Alcohol drinker status
alcohol drinking
766,714
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002115/ScoringFiles/PGS002115.txt.gz
PGS000704
(HC171)
PGP000128
|
Sinnott-Armstrong N
et al.
Nat Genet (2021)
Alcoholic cirrhosis
alcoholic liver cirrhosis
183,271
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000704/ScoringFiles/PGS000704.txt.gz
- Check
Terms/Licenses
PGS001087
(GBE_QT_FC1001558)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Alcohol intake frequency
alcohol consumption measurement
8,353
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001087/ScoringFiles/PGS001087.txt.gz
PGS001934
(portability-PLR_less_alcohol)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Alcohol intake frequency
alcohol consumption measurement
50,955
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001934/ScoringFiles/PGS001934.txt.gz
PGS002152
(portability-ldpred2_less_alcohol)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Alcohol intake frequency
alcohol consumption measurement
946,965
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002152/ScoringFiles/PGS002152.txt.gz
PGS002738
(PRS_AUD)
PGP000345
|
Lai D
et al.
Alcohol Clin Exp Res (2022)
Alcohol use disorder
alcohol dependence
326,000
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002738/ScoringFiles/PGS002738.txt.gz
PGS002739
(PRS_gene)
PGP000346
|
Lai D
et al.
Transl Psychiatry (2022)
Alcohol use disorder
alcohol dependence
858
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002739/ScoringFiles/PGS002739.txt.gz
PGS000815
(GRS290_ALP)
PGP000201
|
Pazoki R
et al.
Nat Commun (2021)
Alkaline phosphatase
alkaline phosphatase measurement
290
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000815/ScoringFiles/PGS000815.txt.gz
PGS001939
(portability-PLR_log_ALP)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Alkaline phosphatase
alkaline phosphatase measurement
50,948
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001939/ScoringFiles/PGS001939.txt.gz
PGS002157
(portability-ldpred2_log_ALP)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Alkaline phosphatase
alkaline phosphatase measurement
874,365
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002157/ScoringFiles/PGS002157.txt.gz
PGS003521
(cont-decay-log_ALP)
PGP000457
|
Ding Y
et al.
bioRxiv (2022)
|
Pre
Alkaline phosphatase
alkaline phosphatase measurement
979,739
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003521/ScoringFiles/PGS003521.txt.gz
PGS004711
(ALP_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Alkaline phosphatase
alkaline phosphatase measurement
634,277
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004711/ScoringFiles/PGS004711.txt.gz
PGS004712
(ALP_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Alkaline phosphatase
alkaline phosphatase measurement
1,704,295
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004712/ScoringFiles/PGS004712.txt.gz
PGS004713
(ALP_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Alkaline phosphatase
alkaline phosphatase measurement
4,268,599
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004713/ScoringFiles/PGS004713.txt.gz
PGS004714
(ALP_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Alkaline phosphatase
alkaline phosphatase measurement
1,704,295
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004714/ScoringFiles/PGS004714.txt.gz
PGS000670
(snpnet.Alkaline_phosphatase)
PGP000128
|
Sinnott-Armstrong N
et al.
Nat Genet (2021)
Alkaline phosphatase [U/L]
alkaline phosphatase measurement
18,328
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000670/ScoringFiles/PGS000670.txt.gz
- Check
Terms/Licenses
PGS000929
(GBE_HC1583)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
All-cause dementia (algorithmically-defined)
dementia
6
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000929/ScoringFiles/PGS000929.txt.gz
PGS000318
(cPRS_F)
PGP000095
|
Meisner A
et al.
Am J Hum Genet (2020)
All-cause mortality (female)
age at death
,
female
4,122
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000318/ScoringFiles/PGS000318.txt.gz
PGS000319
(cPRS_M)
PGP000095
|
Meisner A
et al.
Am J Hum Genet (2020)
All-cause mortality (male)
age at death
,
male
4,092
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000319/ScoringFiles/PGS000319.txt.gz
PGS000780
(PRS135_allergy)
PGP000184
|
Clark H
et al.
Clin Exp Allergy (2019)
Allergic disease
allergic disease
135
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000780/ScoringFiles/PGS000780.txt.gz
PGS000800
(GRSw_SHARE)
PGP000189
|
Dijk FN
et al.
J Allergy Clin Immunol (2019)
Allergic disease
allergic disease
133
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000800/ScoringFiles/PGS000800.txt.gz
PGS000810
(wGRS136_Allergy)
PGP000195
|
Ferreira MA
et al.
Nat Genet (2017)
Allergic disease (asthma, hay fever or eczema)
allergic disease
136
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000810/ScoringFiles/PGS000810.txt.gz
PGS001284
(GBE_BIN_FC10006152)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Allergic disease (hay fever, allergic rhinitis, or eczema)
allergic disease
6,755
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001284/ScoringFiles/PGS001284.txt.gz
PGS001286
(GBE_BIN22126)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Allergic disease (hay fever or allergic rhinitis) (diagnosed by doctor)
allergic disease
466
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001286/ScoringFiles/PGS001286.txt.gz
PGS001283
(GBE_INI3761)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Allergic disease (hay fever, rhinitis or eczema)
allergic disease
993
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001283/ScoringFiles/PGS001283.txt.gz
PGS001285
(GBE_BIN_FC5006152)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Allergic disease (hay fever, rhinitis, or eczema) (diagnosed by doctor)
allergic disease
7,313
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001285/ScoringFiles/PGS001285.txt.gz
PGS000867
(GRS10_Allergy)
PGP000213
|
Arabkhazaeli A
et al.
Pediatr Allergy Immunol (2017)
Allergy
allergic disease
10
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000867/ScoringFiles/PGS000867.txt.gz
PGS001885
(portability-PLR_960.2)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Allergy/adverse effect of penicillin
drug allergy
95
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001885/ScoringFiles/PGS001885.txt.gz
PGS002097
(portability-ldpred2_960.2)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Allergy/adverse effect of penicillin
drug allergy
742,904
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002097/ScoringFiles/PGS002097.txt.gz
PGS000025
(GRS)
PGP000015
|
Chouraki V
et al.
J Alzheimers Dis (2016)
Alzheimer's disease
Alzheimer disease
19
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000025/ScoringFiles/PGS000025.txt.gz
PGS000026
(PHS)
PGP000016
|
Desikan RS
et al.
PLoS Med (2017)
Alzheimer's disease
Alzheimer disease
31
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000026/ScoringFiles/PGS000026.txt.gz
PGS000779
(PGS7_AD)
PGP000183
|
Zhou X
et al.
Alzheimers Dement (Amst) (2020)
Alzheimer's disease
Alzheimer disease
7
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000779/ScoringFiles/PGS000779.txt.gz
PGS000811
(AD-PRS_39)
PGP000196
|
Najar J
et al.
Alzheimers Dement (Amst) (2021)
Alzheimer's disease
Alzheimer disease
39
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000811/ScoringFiles/PGS000811.txt.gz
PGS000812
(AD-PRS_57)
PGP000196
|
Najar J
et al.
Alzheimers Dement (Amst) (2021)
Alzheimer's disease
Alzheimer disease
57
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000812/ScoringFiles/PGS000812.txt.gz
PGS000823
(GRS23_AD)
PGP000207
|
van der Lee SJ
et al.
Lancet Neurol (2018)
Alzheimer's disease
Alzheimer disease
23
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000823/ScoringFiles/PGS000823.txt.gz
PGS000876
(PRS31_AD)
PGP000222
|
Leonenko G
et al.
Ann Clin Transl Neurol (2019)
Alzheimer's disease
Alzheimer disease
31
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000876/ScoringFiles/PGS000876.txt.gz
PGS000898
(PRS39_AD)
PGP000231
|
de Rojas I
et al.
Nat Commun (2021)
Alzheimer's disease
Alzheimer disease
40
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000898/ScoringFiles/PGS000898.txt.gz
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