Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000149
(CRC41)
 PGP000072 |
Smith T et al. Br J Cancer (2018)
 Colorectal cancer colorectal cancer 41
-
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000149/ScoringFiles/PGS000149.txt.gz
PGS000150
(GRS48)
 PGP000073 |
Weigl K et al. Gastroenterology (2018)
 Colorectal cancer colorectal cancer 48
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000150/ScoringFiles/PGS000150.txt.gz
PGS000151
(SC_GRS)
 PGP000074 |
Xin J et al. Gene (2018)
 Colorectal cancer colorectal cancer 14
-
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000151/ScoringFiles/PGS000151.txt.gz
PGS000152
(cGRS_Bladder)
 PGP000075 |
Shi Z et al. Cancer Med (2019)
 Bladder cancer urinary bladder carcinoma 10
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000152/ScoringFiles/PGS000152.txt.gz
PGS000153
(cGRS_Breast)
 PGP000075 |
Shi Z et al. Cancer Med (2019)
 Breast cancer breast carcinoma 66
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000153/ScoringFiles/PGS000153.txt.gz
PGS000154
(cGRS_Colorectal)
 PGP000075 |
Shi Z et al. Cancer Med (2019)
 Colorectal cancer colorectal cancer 30
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000154/ScoringFiles/PGS000154.txt.gz
PGS000155
(cGRS_Glioma)
 PGP000075 |
Shi Z et al. Cancer Med (2019)
 Glioma glioma 19
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000155/ScoringFiles/PGS000155.txt.gz
PGS000156
(cGRS_Lung)
 PGP000075 |
Shi Z et al. Cancer Med (2019)
 Lung cancer lung carcinoma 6
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000156/ScoringFiles/PGS000156.txt.gz
PGS000157
(cGRS_Melanoma)
 PGP000075 |
Shi Z et al. Cancer Med (2019)
 Melanoma melanoma 17
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000157/ScoringFiles/PGS000157.txt.gz
PGS000158
(cGRS_Ovarian)
 PGP000075 |
Shi Z et al. Cancer Med (2019)
 Ovarian cancer ovarian carcinoma 11
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000158/ScoringFiles/PGS000158.txt.gz
PGS000159
(cGRS_Pancreatic)
 PGP000075 |
Shi Z et al. Cancer Med (2019)
 Pancreatic cancer pancreatic carcinoma 9
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000159/ScoringFiles/PGS000159.txt.gz
PGS000160
(cGRS_Prostate)
 PGP000075 |
Shi Z et al. Cancer Med (2019)
 Prostate cancer prostate carcinoma 79
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000160/ScoringFiles/PGS000160.txt.gz
PGS000161
(cGRS_Renal)
 PGP000075 |
Shi Z et al. Cancer Med (2019)
 Renal cancer renal carcinoma 10
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000161/ScoringFiles/PGS000161.txt.gz
PGS000162
(cGRS_Thyroid)
 PGP000075 |
Shi Z et al. Cancer Med (2019)
 Thyroid cancer thyroid carcinoma 6
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000162/ScoringFiles/PGS000162.txt.gz
PGS000163
(baso)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Basophil count basophil count 185
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000163/ScoringFiles/PGS000163.txt.gz
PGS000164
(baso_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Basophil percentage of white cells basophil percentage of leukocytes 150
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000164/ScoringFiles/PGS000164.txt.gz
PGS000165
(eo)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Eosinophil count eosinophil count 607
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000165/ScoringFiles/PGS000165.txt.gz
PGS000166
(eo_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Eosinophil percentage of white cells eosinophil percentage of leukocytes 571
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000166/ScoringFiles/PGS000166.txt.gz
PGS000167
(hct)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Hematocrit hematocrit 502
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000167/ScoringFiles/PGS000167.txt.gz
PGS000168
(hgb)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Hemoglobin concentration hemoglobin measurement 515
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000168/ScoringFiles/PGS000168.txt.gz
PGS000169
(hlr)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 High light scatter reticulocyte count reticulocyte count 570
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000169/ScoringFiles/PGS000169.txt.gz
PGS000170
(hlr_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 High light scatter reticulocyte percentage of red cells reticulocyte count 566
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000170/ScoringFiles/PGS000170.txt.gz
PGS000171
(irf)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Immature fraction of reticulocytes reticulocyte count 372
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000171/ScoringFiles/PGS000171.txt.gz
PGS000172
(lymph)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Lymphocyte count lymphocyte count 621
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000172/ScoringFiles/PGS000172.txt.gz
PGS000173
(lymph_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Lymphocyte percentage of white cells lymphocyte percentage of leukocytes 472
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000173/ScoringFiles/PGS000173.txt.gz
PGS000174
(mch)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Mean corpuscular hemoglobin mean corpuscular hemoglobin 628
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000174/ScoringFiles/PGS000174.txt.gz
PGS000175
(mchc)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Mean corpuscular hemoglobin concentration mean corpuscular hemoglobin concentration 224
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000175/ScoringFiles/PGS000175.txt.gz
PGS000176
(mcv)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Mean corpuscular volume mean corpuscular volume 685
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000176/ScoringFiles/PGS000176.txt.gz
PGS000177
(mono)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Monocyte count monocyte count 638
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000177/ScoringFiles/PGS000177.txt.gz
PGS000178
(mono_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Monocyte percentage of white cells monocyte percentage of leukocytes 549
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000178/ScoringFiles/PGS000178.txt.gz
PGS000179
(mpv)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Mean platelet volume mean platelet volume 654
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000179/ScoringFiles/PGS000179.txt.gz
PGS000180
(mrv)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Mean reticulocyte volume mean reticulocyte volume 629
-
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000180/ScoringFiles/PGS000180.txt.gz
PGS000181
(mscv)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Mean sphered corpuscular volume mean corpuscular volume 761
-
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000181/ScoringFiles/PGS000181.txt.gz
PGS000182
(neut)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Neutrophil count neutrophil count 492
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000182/ScoringFiles/PGS000182.txt.gz
PGS000183
(neut_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Neutrophil percentage of white cells neutrophil percentage of leukocytes 437
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000183/ScoringFiles/PGS000183.txt.gz
PGS000184
(pct)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Platelet crit platelet crit 700
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000184/ScoringFiles/PGS000184.txt.gz
PGS000185
(pdw)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Platelet distribution width platelet component distribution width 555
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000185/ScoringFiles/PGS000185.txt.gz
PGS000186
(plt)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Platelet count platelet count 739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000186/ScoringFiles/PGS000186.txt.gz
PGS000187
(rbc)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Red blood cell count erythrocyte count 678
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000187/ScoringFiles/PGS000187.txt.gz
PGS000188
(rdw)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Red cell distribution width Red cell distribution width 546
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000188/ScoringFiles/PGS000188.txt.gz
PGS000189
(ret)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Reticulocyte count reticulocyte count 555
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000189/ScoringFiles/PGS000189.txt.gz
PGS000190
(ret_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Reticulocyte fraction of red cells reticulocyte count 537
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000190/ScoringFiles/PGS000190.txt.gz
PGS000191
(wbc)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 White blood cell count leukocyte count 636
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000191/ScoringFiles/PGS000191.txt.gz
PGS000192
(GS9)
 PGP000079 |
Kathiresan S et al. N Engl J Med (2008)
 Cholesterol low density lipoprotein cholesterol measurement,
high density lipoprotein cholesterol measurement		 9
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000192/ScoringFiles/PGS000192.txt.gz
PGS000193
(MDD_0.001_Coleman_2020)
 PGS000080 |
Coleman JRI et al. Mol Psychiatry (2020)
 Major depression major depressive disorder 1,138
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000193/ScoringFiles/PGS000193.txt.gz
PGS000194
(G-PROB_Rapos)
 PGP000081 |
Knevel R et al. Sci Transl Med (2020)
 Rheumatoid arthritis (CCP-negative) ACPA-positive rheumatoid arthritis 114
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000194/ScoringFiles/PGS000194.txt.gz
PGS000195
(G-PROB_Raneg)
 PGP000081 |
Knevel R et al. Sci Transl Med (2020)
 Rheumatoid arthritis (CCP-negative) ACPA-negative rheumatoid arthritis 96
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000195/ScoringFiles/PGS000195.txt.gz
PGS000196
(G-PROB_SLE)
 PGP000081 |
Knevel R et al. Sci Transl Med (2020)
 Systemic lupus erythematosus systemic lupus erythematosus 55
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000196/ScoringFiles/PGS000196.txt.gz
PGS000197
(G-PROB_SpA)
 PGP000081 |
Knevel R et al. Sci Transl Med (2020)
 Spondyloarthroparthy spondyloarthropathy 31
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000197/ScoringFiles/PGS000197.txt.gz
PGS000198
(G-PROB_PsA)
 PGP000081 |
Knevel R et al. Sci Transl Med (2020)
 Psoriatic arthritis psoriatic arthritis 31
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000198/ScoringFiles/PGS000198.txt.gz
Showing 151 to 200 of 5022 rows