Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS002423
(disease_THYROID_ANY_SELF_REP.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Thyroid (self-reported conditions) thyroid disease 4,483
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002423/ScoringFiles/PGS002423.txt.gz
PGS002424
(biochemistry_Cholesterol.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Total cholesterol total cholesterol measurement 8,526
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002424/ScoringFiles/PGS002424.txt.gz
PGS002425
(biochemistry_Triglycerides.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Triglycerides triglyceride measurement 10,135
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002425/ScoringFiles/PGS002425.txt.gz
PGS002426
(disease_T2D.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 3,947
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002426/ScoringFiles/PGS002426.txt.gz
PGS002427
(biochemistry_VitaminD.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D measurement 4,821
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002427/ScoringFiles/PGS002427.txt.gz
PGS002428
(body_WHRadjBMIz.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Waist-hip ratio waist-hip ratio 9,477
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002428/ScoringFiles/PGS002428.txt.gz
PGS002429
(blood_WHITE_COUNT.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 White blood cell count leukocyte quantity 13,898
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002429/ScoringFiles/PGS002429.txt.gz
PGS002430
(repro_NumberChildrenEverBorn_Pooled.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Number of children ever born number of children ever born measurement 11,512
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002430/ScoringFiles/PGS002430.txt.gz
PGS002431
(repro_MENARCHE_AGE.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Age at menarche age at menarche 21,880
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002431/ScoringFiles/PGS002431.txt.gz
PGS002432
(disease_ASTHMA_DIAGNOSED.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Asthma asthma 15,843
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002432/ScoringFiles/PGS002432.txt.gz
PGS002433
(disease_AID_ALL.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 13,075
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002433/ScoringFiles/PGS002433.txt.gz
PGS002434
(body_BMIz.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Body mass index (BMI) body mass index 41,662
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002434/ScoringFiles/PGS002434.txt.gz
PGS002435
(body_BALDING1.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Balding Type 1 balding measurement 21,564
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002435/ScoringFiles/PGS002435.txt.gz
PGS002436
(bmd_HEEL_TSCOREz.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Bone mineral density (BMD) bone tissue density 53,472
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002436/ScoringFiles/PGS002436.txt.gz
PGS002437
(disease_CARDIOVASCULAR.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Cardiovascular disease cardiovascular disease 20,431
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002437/ScoringFiles/PGS002437.txt.gz
PGS002438
(repro_ChildLess.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Childless reproductive behavior trait 10,891
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002438/ScoringFiles/PGS002438.txt.gz
PGS002439
(other_MORNINGPERSON.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Chronotype (morning person) chronotype measurement 16,590
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002439/ScoringFiles/PGS002439.txt.gz
PGS002440
(cov_EDU_COLLEGE.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 College education educational attainment 24,405
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002440/ScoringFiles/PGS002440.txt.gz
PGS002441
(disease_DERMATOLOGY.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Dermatologic diseases skin disease 14,624
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002441/ScoringFiles/PGS002441.txt.gz
PGS002442
(disease_DIABETES_ANY_DIAGNOSED.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Diabetes (any type) diabetes mellitus 15,915
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002442/ScoringFiles/PGS002442.txt.gz
PGS002443
(bp_DIASTOLICadjMEDz.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Diastolic blood pressure diastolic blood pressure 31,790
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002443/ScoringFiles/PGS002443.txt.gz
PGS002444
(disease_ALLERGY_ECZEMA_DIAGNOSED.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Eczema Eczematoid dermatitis 16,802
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002444/ScoringFiles/PGS002444.txt.gz
PGS002445
(disease_ENDOCRINE_DIABETES.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Endocrine and diabetes diseases diabetes mellitus,
endocrine system disease		 15,629
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002445/ScoringFiles/PGS002445.txt.gz
PGS002446
(blood_EOSINOPHIL_COUNT.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Eosinophil count eosinophil count 35,512
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002446/ScoringFiles/PGS002446.txt.gz
PGS002447
(lung_FEV1FVCzSMOKE.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 FEV1/FVC ratio FEV/FVC ratio 33,367
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002447/ScoringFiles/PGS002447.txt.gz
PGS002448
(lung_FVCzSMOKE.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Forced vital capacity vital capacity 29,603
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002448/ScoringFiles/PGS002448.txt.gz
PGS002449
(biochemistry_Glucose.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Glucose glucose measurement 15,659
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002449/ScoringFiles/PGS002449.txt.gz
PGS002450
(biochemistry_HDLcholesterol.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 HDL cholesterol high density lipoprotein cholesterol measurement 35,979
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002450/ScoringFiles/PGS002450.txt.gz
PGS002451
(pigment_HAIR.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Hair color strand of hair color 35,360
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002451/ScoringFiles/PGS002451.txt.gz
PGS002452
(biochemistry_HbA1c.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 HbA1c HbA1c measurement 30,603
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002452/ScoringFiles/PGS002452.txt.gz
PGS002453
(body_HEIGHTz.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Height body height 103,911
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002453/ScoringFiles/PGS002453.txt.gz
PGS002454
(blood_HIGH_LIGHT_SCATTER_RETICULOCYTE_COUNT.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 High light scatter reticulocyte count reticulocyte count 37,335
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002454/ScoringFiles/PGS002454.txt.gz
PGS002455
(disease_HI_CHOL_SELF_REP.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 High cholesterol Hypercholesterolemia 13,788
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002455/ScoringFiles/PGS002455.txt.gz
PGS002456
(disease_HYPERTENSION_DIAGNOSED.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Hypertension hypertension 22,539
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002456/ScoringFiles/PGS002456.txt.gz
PGS002457
(disease_HYPOTHYROIDISM_SELF_REP.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Hypothyroidism hypothyroidism 17,519
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002457/ScoringFiles/PGS002457.txt.gz
PGS002458
(biochemistry_LDLdirect.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 LDL cholesterol low density lipoprotein cholesterol measurement 20,708
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002458/ScoringFiles/PGS002458.txt.gz
PGS002459
(blood_LYMPHOCYTE_COUNT.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Lymphocyte count lymphocyte count 36,117
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002459/ScoringFiles/PGS002459.txt.gz
PGS002460
(blood_MEAN_CORPUSCULAR_HEMOGLOBIN.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Mean corpuscular hemoglobin mean corpuscular hemoglobin 44,827
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002460/ScoringFiles/PGS002460.txt.gz
PGS002461
(blood_MEAN_PLATELET_VOL.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Mean platelet volume platelet volume 65,237
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002461/ScoringFiles/PGS002461.txt.gz
PGS002462
(blood_MONOCYTE_COUNT.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Monocyte count monocyte count 38,012
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002462/ScoringFiles/PGS002462.txt.gz
PGS002463
(mental_NEUROTICISM.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Neuroticism neuroticism measurement 16,660
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002463/ScoringFiles/PGS002463.txt.gz
PGS002464
(blood_PLATELET_COUNT.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Platelet count platelet count 54,318
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002464/ScoringFiles/PGS002464.txt.gz
PGS002465
(disease_PSORIASIS.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Psoriasis psoriasis 21,483
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002465/ScoringFiles/PGS002465.txt.gz
PGS002466
(blood_RED_COUNT.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell count erythrocyte count 41,471
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002466/ScoringFiles/PGS002466.txt.gz
PGS002467
(blood_RBC_DISTRIB_WIDTH.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell distribution width Red cell distribution width 36,619
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002467/ScoringFiles/PGS002467.txt.gz
PGS002468
(disease_RESPIRATORY_ENT.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Respiratory and ear-nose-throat diseases respiratory system disease 14,628
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002468/ScoringFiles/PGS002468.txt.gz
PGS002469
(cov_SMOKING_STATUS.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Smoking status smoking status measurement 17,774
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002469/ScoringFiles/PGS002469.txt.gz
PGS002470
(bp_SYSTOLICadjMEDz.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Systolic blood pressure systolic blood pressure 32,439
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002470/ScoringFiles/PGS002470.txt.gz
PGS002471
(pigment_TANNING.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Tanning suntan 20,040
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002471/ScoringFiles/PGS002471.txt.gz
PGS002472
(disease_THYROID_ANY_SELF_REP.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Thyroid (self-reported conditions) thyroid disease 16,694
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002472/ScoringFiles/PGS002472.txt.gz
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