Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS004279
(GenoBoost_asthma_4)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Asthma asthma 5,000
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004279/ScoringFiles/PGS004279.txt.gz
PGS004439
(disease.Asthma.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Asthma asthma 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004439/ScoringFiles/PGS004439.txt.gz
PGS004509
(meta.Asthma.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Asthma asthma 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004509/ScoringFiles/PGS004509.txt.gz
PGS004723
(asthma_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Asthma asthma 985,316
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004723/ScoringFiles/PGS004723.txt.gz
PGS004724
(asthma_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Asthma asthma 2,342,250
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004724/ScoringFiles/PGS004724.txt.gz
PGS004725
(asthma_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Asthma asthma 3,972,232
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004725/ScoringFiles/PGS004725.txt.gz
PGS004726
(asthma_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Asthma asthma 2,342,250
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004726/ScoringFiles/PGS004726.txt.gz
PGS004877
(INTERVENE_MegaPRS_Asthma)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 Asthma asthma 870,454
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004877/ScoringFiles/PGS004877.txt.gz
PGS001343
(GBE_HC1581)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Asthma (algorithmically-defined) asthma 6,425
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001343/ScoringFiles/PGS001343.txt.gz
PGS001344
(GBE_BIN_FC4006152)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Asthma (diagnosed by doctor) asthma 6,139
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001344/ScoringFiles/PGS001344.txt.gz
PGS001345
(GBE_BIN22127)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Asthma (diagnosed by doctor) asthma 435
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001345/ScoringFiles/PGS001345.txt.gz
PGS001346
(GBE_HC1036)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Asthma (time-to-event) asthma 8,508
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001346/ScoringFiles/PGS001346.txt.gz
PGS000674
(snpnet.AST_ALT_ratio)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 AST to ALT ratio aspartate aminotransferase to alanine aminotransferase ratio 15,548
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000674/ScoringFiles/PGS000674.txt.gz - Check Terms/Licenses
PGS002755
(Atopic_dermatitis_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Atopic dermatitis atopic eczema 1,090,702
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002755/ScoringFiles/PGS002755.txt.gz
PGS004587
(PRS23_AD)
 PGP000566 |
Gu X et al. Ecotoxicol Environ Saf (2023)
 Atopic dermatitis atopic eczema 23
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004587/ScoringFiles/PGS004587.txt.gz
PGS004903
(PRS_ALL)
 PGP000633 |
Al-Janabi A et al. J Allergy Clin Immunol (2023)
 Atopic dermatitis atopic eczema 38
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004903/ScoringFiles/PGS004903.txt.gz
PGS003486
(PRS_AE)
 PGP000451 |
Al-Janabi A et al. J Invest Dermatol (2023)
 Atopic eczema atopic eczema 71
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003486/ScoringFiles/PGS003486.txt.gz
PGS003459
(PRS_CO)
 PGP000451 |
Al-Janabi A et al. J Invest Dermatol (2023)
 Atopic eczema or atopic disease atopic eczema,
allergic disease		 170
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003459/ScoringFiles/PGS003459.txt.gz
PGS000016
(GPS_AF)
 PGP000006 |
Khera AV et al. Nat Genet (2018)
 Atrial fibrillation atrial fibrillation 6,730,541
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000016/ScoringFiles/PGS000016.txt.gz - Check Terms/Licenses
PGS000035
(PRS_AF)
 PGP000022 |
Weng LC et al. Circulation (2017)
 Atrial fibrillation atrial fibrillation 1,168
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000035/ScoringFiles/PGS000035.txt.gz
PGS000331
(PRS_AF)
 PGP000100 |
Mars N et al. Nat Med (2020)
 Atrial fibrillation atrial fibrillation 6,183,494
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000331/ScoringFiles/PGS000331.txt.gz
PGS000338
(GRS97_AF)
 PGP000105 |
Kloosterman M et al. Eur J Heart Fail (2020)
 Atrial fibrillation atrial fibrillation 97
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000338/ScoringFiles/PGS000338.txt.gz
PGS000727
(AF_PGS)
 PGP000137 |
Ritchie SC et al. Nat Metab (2021)
 Atrial fibrillation atrial fibrillation 2,210,336
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000727/ScoringFiles/PGS000727.txt.gz
PGS001340
(GBE_HC281)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Atrial fibrillation atrial fibrillation 2,955
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001340/ScoringFiles/PGS001340.txt.gz
PGS001356
(AF_AnnoPred_PRS)
 PGP000252 |
Ye Y et al. Circ Genom Precis Med (2021)
 Atrial fibrillation atrial fibrillation 2,996,793
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001356/ScoringFiles/PGS001356.txt.gz
PGS002756
(Atrial_fibrillation_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Atrial fibrillation atrial fibrillation 1,091,491
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002756/ScoringFiles/PGS002756.txt.gz
PGS002814
(AF-PRS)
 PGP000392 |
Miyazawa K et al. Nat Genet (2023)
 Atrial fibrillation atrial fibrillation 4,520
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002814/ScoringFiles/PGS002814.txt.gz
PGS003461
(GRS162_AF)
 PGP000454 |
Yang L et al. NPJ Digit Med (2023)
 Atrial fibrillation atrial fibrillation 162
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003461/ScoringFiles/PGS003461.txt.gz
PGS003761
(PRS165_AF)
 PGP000484 |
Zhang J et al. BMC Med (2023)
 Atrial fibrillation atrial fibrillation 165
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003761/ScoringFiles/PGS003761.txt.gz
PGS004186
(afib_1)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Atrial fibrillation atrial fibrillation 3,082
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004186/ScoringFiles/PGS004186.txt.gz
PGS004187
(afib_2)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Atrial fibrillation atrial fibrillation 5,118
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004187/ScoringFiles/PGS004187.txt.gz
PGS004188
(afib_3)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Atrial fibrillation atrial fibrillation 2,420
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004188/ScoringFiles/PGS004188.txt.gz
PGS004189
(afib_4)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Atrial fibrillation atrial fibrillation 3,434
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004189/ScoringFiles/PGS004189.txt.gz
PGS004190
(afib_5)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Atrial fibrillation atrial fibrillation 1,972
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004190/ScoringFiles/PGS004190.txt.gz
PGS004290
(GenoBoost_atrial_fibrillation_0)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Atrial fibrillation atrial fibrillation 3,000
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004290/ScoringFiles/PGS004290.txt.gz
PGS004291
(GenoBoost_atrial_fibrillation_1)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Atrial fibrillation atrial fibrillation 3,000
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004291/ScoringFiles/PGS004291.txt.gz
PGS004292
(GenoBoost_atrial_fibrillation_2)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Atrial fibrillation atrial fibrillation 700
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004292/ScoringFiles/PGS004292.txt.gz
PGS004293
(GenoBoost_atrial_fibrillation_3)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Atrial fibrillation atrial fibrillation 2,000
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004293/ScoringFiles/PGS004293.txt.gz
PGS004294
(GenoBoost_atrial_fibrillation_4)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Atrial fibrillation atrial fibrillation 2,000
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004294/ScoringFiles/PGS004294.txt.gz
PGS004440
(disease.Atrial_fibrillation.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Atrial fibrillation atrial fibrillation 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004440/ScoringFiles/PGS004440.txt.gz
PGS004510
(meta.Atrial_fibrillation.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Atrial fibrillation atrial fibrillation 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004510/ScoringFiles/PGS004510.txt.gz
PGS004878
(INTERVENE_MegaPRS_Atrial_fibrillation)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 Atrial fibrillation atrial fibrillation 785,779
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004878/ScoringFiles/PGS004878.txt.gz
PGS004905
(PRS155_AF)
 PGP000638 |
Ma Y et al. Proc Natl Acad Sci U S A (2023)
 Atrial fibrillation atrial fibrillation 155
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004905/ScoringFiles/PGS004905.txt.gz
PGS004920
(GRS166_AF)
 PGP000652 |
Wang N et al. Eur Heart J (2021)
 Atrial fibrillation atrial fibrillation 166
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004920/ScoringFiles/PGS004920.txt.gz
PGS004705
(afib_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Atrial Fibrillation atrial fibrillation 3,575,124
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004705/ScoringFiles/PGS004705.txt.gz
PGS004706
(afib_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Atrial Fibrillation atrial fibrillation 3,576,958
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004706/ScoringFiles/PGS004706.txt.gz
PGS001841
(portability-PLR_427.2)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Atrial fibrillation and flutter atrial fibrillation,
atrial flutter		 3,980
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001841/ScoringFiles/PGS001841.txt.gz
PGS002050
(portability-ldpred2_427.2)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Atrial fibrillation and flutter atrial fibrillation,
atrial flutter		 554,908
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002050/ScoringFiles/PGS002050.txt.gz
PGS001339
(GBE_HC964)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Atrial fibrillation and flutter (time-to-event) atrial fibrillation,
atrial flutter		 2,142
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001339/ScoringFiles/PGS001339.txt.gz
PGS001263
(GBE_HC440)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Atrial flutter atrial flutter 2,087
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001263/ScoringFiles/PGS001263.txt.gz
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