Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000331
(PRS_AF)
 PGP000100 |
Mars N et al. Nat Med (2020)
 Atrial fibrillation atrial fibrillation 6,183,494
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000331/ScoringFiles/PGS000331.txt.gz
PGS000338
(GRS97_AF)
 PGP000105 |
Kloosterman M et al. Eur J Heart Fail (2020)
 Atrial fibrillation atrial fibrillation 97
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000338/ScoringFiles/PGS000338.txt.gz
PGS000727
(AF_PGS)
 PGP000137 |
Ritchie SC et al. Nat Metab (2021)
 Atrial fibrillation atrial fibrillation 2,210,336
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000727/ScoringFiles/PGS000727.txt.gz
PGS001340
(GBE_HC281)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Atrial fibrillation atrial fibrillation 2,955
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001340/ScoringFiles/PGS001340.txt.gz
PGS001356
(AF_AnnoPred_PRS)
 PGP000252 |
Ye Y et al. Circ Genom Precis Med (2021)
 Atrial fibrillation atrial fibrillation 2,996,793
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001356/ScoringFiles/PGS001356.txt.gz
PGS002756
(Atrial_fibrillation_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Atrial fibrillation atrial fibrillation 1,091,491
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002756/ScoringFiles/PGS002756.txt.gz
PGS002814
(AF-PRS)
 PGP000392 |
Miyazawa K et al. Nat Genet (2023)
 Atrial fibrillation atrial fibrillation 4,520
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002814/ScoringFiles/PGS002814.txt.gz
PGS003461
(GRS162_AF)
 PGP000454 |
Yang L et al. NPJ Digit Med (2023)
 Atrial fibrillation atrial fibrillation 162
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003461/ScoringFiles/PGS003461.txt.gz
PGS003761
(PRS165_AF)
 PGP000484 |
Zhang J et al. BMC Med (2023)
 Atrial fibrillation atrial fibrillation 165
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003761/ScoringFiles/PGS003761.txt.gz
PGS004186
(afib_1)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Atrial fibrillation atrial fibrillation 3,082
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004186/ScoringFiles/PGS004186.txt.gz
PGS004187
(afib_2)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Atrial fibrillation atrial fibrillation 5,118
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004187/ScoringFiles/PGS004187.txt.gz
PGS004188
(afib_3)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Atrial fibrillation atrial fibrillation 2,420
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004188/ScoringFiles/PGS004188.txt.gz
PGS004189
(afib_4)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Atrial fibrillation atrial fibrillation 3,434
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004189/ScoringFiles/PGS004189.txt.gz
PGS004190
(afib_5)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Atrial fibrillation atrial fibrillation 1,972
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004190/ScoringFiles/PGS004190.txt.gz
PGS004440
(disease.Atrial_fibrillation.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Atrial fibrillation atrial fibrillation 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004440/ScoringFiles/PGS004440.txt.gz
PGS004510
(meta.Atrial_fibrillation.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Atrial fibrillation atrial fibrillation 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004510/ScoringFiles/PGS004510.txt.gz
PGS004705
(afib_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Atrial Fibrillation atrial fibrillation 3,575,124
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004705/ScoringFiles/PGS004705.txt.gz
PGS004706
(afib_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Atrial Fibrillation atrial fibrillation 3,576,958
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004706/ScoringFiles/PGS004706.txt.gz
PGS001841
(portability-PLR_427.2)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Atrial fibrillation and flutter atrial fibrillation,
atrial flutter		 3,980
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001841/ScoringFiles/PGS001841.txt.gz
PGS002050
(portability-ldpred2_427.2)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Atrial fibrillation and flutter atrial fibrillation,
atrial flutter		 554,908
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002050/ScoringFiles/PGS002050.txt.gz
PGS001339
(GBE_HC964)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Atrial fibrillation and flutter (time-to-event) atrial fibrillation,
atrial flutter		 2,142
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001339/ScoringFiles/PGS001339.txt.gz
PGS001263
(GBE_HC440)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Atrial flutter atrial flutter 2,087
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001263/ScoringFiles/PGS001263.txt.gz
PGS001018
(GBE_BIN_FC10006160)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Attending social / leisure activities (attend any of the followings in once a week or more often: sports club, gym, pub, social club, religious group, adult edication class, or other group activity) social interaction measurement 2,912
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001018/ScoringFiles/PGS001018.txt.gz
PGS001019
(GBE_BIN_FC20006160)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Attending social / leisure activities (regular attendance at a gym or sports club) social interaction measurement 11,361
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001019/ScoringFiles/PGS001019.txt.gz
PGS001020
(GBE_BIN_FC50006160)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Attending social / leisure activities (regular attendance at an adult education class) social interaction measurement 220
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001020/ScoringFiles/PGS001020.txt.gz
PGS003753
(PRS35445_ADHD)
 PGP000473 |
Sato JR et al. Genes Brain Behav (2023)
 Attention deficit hyperactivity disorder attention deficit hyperactivity disorder 35,445
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003753/ScoringFiles/PGS003753.txt.gz
PGS002746
(PRS_ADHD)
 PGP000358 |
Lahey BB et al. J Psychiatr Res (2022)
 Attention-deficit hyperactivity disorder attention deficit hyperactivity disorder 513,659
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002746/ScoringFiles/PGS002746.txt.gz
PGS000327
(ASD2019)
 PGP000098 |
Grove J et al. Nat Genet (2019)
 Autism spectrum disorder autism spectrum disorder 35,087
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000327/ScoringFiles/PGS000327.txt.gz
PGS002790
(ASD_SDPR)
 PGP000370 |
Gui Y et al. Transl Psychiatry (2022)
 Autism spectrum disorder autism spectrum disorder 916,713
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002790/ScoringFiles/PGS002790.txt.gz
PGS004239
(PRS14AAD)
 PGP000538 |
Aranda-Guillén M et al. J Intern Med (2023)
 Autoimmune Addison's disease chronic primary adrenal insufficiency 14
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004239/ScoringFiles/PGS004239.txt.gz
PGS002312
(disease_AID_ALL.BOLT-LMM)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 1,109,311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002312/ScoringFiles/PGS002312.txt.gz
PGS002359
(disease_AID_ALL.BOLT-LMM-BBJ)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 920,927
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002359/ScoringFiles/PGS002359.txt.gz
PGS002384
(disease_AID_ALL.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 2,563
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002384/ScoringFiles/PGS002384.txt.gz
PGS002433
(disease_AID_ALL.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 13,075
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002433/ScoringFiles/PGS002433.txt.gz
PGS002482
(disease_AID_ALL.P+T.0.01)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 88,404
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002482/ScoringFiles/PGS002482.txt.gz
PGS002531
(disease_AID_ALL.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 382
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002531/ScoringFiles/PGS002531.txt.gz
PGS002580
(disease_AID_ALL.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 206
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002580/ScoringFiles/PGS002580.txt.gz
PGS002629
(disease_AID_ALL.PolyFun-pred)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 159,127
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002629/ScoringFiles/PGS002629.txt.gz
PGS002678
(disease_AID_ALL.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 923,726
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002678/ScoringFiles/PGS002678.txt.gz
PGS001375
(GBE_INI22426)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Average heart rate heart rate 243
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001375/ScoringFiles/PGS001375.txt.gz
PGS001376
(GBE_INI21044)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Average number of times bowels opened per day bowel opening frequency 845
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001376/ScoringFiles/PGS001376.txt.gz
PGS001931
(portability-PLR_income)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Average total household income before tax household income 41,836
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001931/ScoringFiles/PGS001931.txt.gz
PGS002148
(portability-ldpred2_income)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Average total household income before tax household income 932,197
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002148/ScoringFiles/PGS002148.txt.gz
PGS003516
(cont-decay-income)
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Average total household income before tax household income 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003516/ScoringFiles/PGS003516.txt.gz
PGS001088
(GBE_INI1588)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Average weekly alcohol consumption (beer and cider) alcohol consumption measurement 2,842
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001088/ScoringFiles/PGS001088.txt.gz
PGS001890
(portability-PLR_avMSE)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 avMSE visual acuity measurement 44,864
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001890/ScoringFiles/PGS001890.txt.gz
PGS002103
(portability-ldpred2_avMSE)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 avMSE visual acuity measurement 833,170
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002103/ScoringFiles/PGS002103.txt.gz
PGS003493
(cont-decay-avMSE)
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 avMSE visual acuity measurement 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003493/ScoringFiles/PGS003493.txt.gz
PGS002314
(body_BALDING1.BOLT-LMM)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Balding Type 1 balding measurement 1,109,311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002314/ScoringFiles/PGS002314.txt.gz
PGS002386
(body_BALDING1.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Balding Type 1 balding measurement 7,823
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002386/ScoringFiles/PGS002386.txt.gz
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