Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS002100
(portability-ldpred2_ankle_spacing)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Ankle spacing width anthropometric measurement 917,925
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002100/ScoringFiles/PGS002100.txt.gz
PGS003490
(cont-decay-ankle_spacing)
 PGP000457 |
Ding Y et al. Nature (2023)
 Ankle spacing width body weights and measures 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003490/ScoringFiles/PGS003490.txt.gz
PGS004412
(X3143.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Ankle spacing width body weights and measures 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004412/ScoringFiles/PGS004412.txt.gz
PGS001242
(GBE_INI4100)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Ankle spacing width (L) anthropometric measurement 13,416
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001242/ScoringFiles/PGS001242.txt.gz
PGS004416
(X4100.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Ankle spacing width (left) body weights and measures 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004416/ScoringFiles/PGS004416.txt.gz
PGS001243
(GBE_INI4119)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Ankle spacing width (R) anthropometric measurement 15,134
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001243/ScoringFiles/PGS001243.txt.gz
PGS004421
(X4119.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Ankle spacing width (right) body weights and measures 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004421/ScoringFiles/PGS004421.txt.gz
PGS001267
(GBE_HC422)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Ankylosing spondylitis ankylosing spondylitis 10
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001267/ScoringFiles/PGS001267.txt.gz
PGS001876
(portability-PLR_715.2)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Ankylosing spondylitis ankylosing spondylitis 85
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001876/ScoringFiles/PGS001876.txt.gz
PGS002089
(portability-ldpred2_715.2)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Ankylosing spondylitis ankylosing spondylitis 22,026
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002089/ScoringFiles/PGS002089.txt.gz
PGS003420
(PRS100_PRScs)
 PGP000431 |
Ko CL et al. J Transl Med (2022)
 Ankylosing spondylitis ankylosing spondylitis 100
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003420/ScoringFiles/PGS003420.txt.gz
PGS003421
(PRS16_C+T)
 PGP000431 |
Ko CL et al. J Transl Med (2022)
 Ankylosing spondylitis ankylosing spondylitis 16
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003421/ScoringFiles/PGS003421.txt.gz
PGS003422
(PRS16_PRSice2)
 PGP000431 |
Ko CL et al. J Transl Med (2022)
 Ankylosing spondylitis ankylosing spondylitis 16
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003422/ScoringFiles/PGS003422.txt.gz
PGS003423
(PRS100_Lassosum)
 PGP000431 |
Ko CL et al. J Transl Med (2022)
 Ankylosing spondylitis ankylosing spondylitis 100
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003423/ScoringFiles/PGS003423.txt.gz
PGS003424
(PRS100_LDpred2)
 PGP000431 |
Ko CL et al. J Transl Med (2022)
 Ankylosing spondylitis ankylosing spondylitis 100
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003424/ScoringFiles/PGS003424.txt.gz
PGS019671
(TPMI_715.2_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Ankylosing spondylitis ankylosing spondylitis 20
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019671/ScoringFiles/PGS019671.txt.gz
PGS019672
(TPMI_715.2_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Ankylosing spondylitis ankylosing spondylitis 939,888
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019672/ScoringFiles/PGS019672.txt.gz
PGS019673
(TPMI_715.2_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Ankylosing spondylitis ankylosing spondylitis 292,554
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019673/ScoringFiles/PGS019673.txt.gz
PGS019674
(TPMI_715.2_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Ankylosing spondylitis ankylosing spondylitis 983,830
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019674/ScoringFiles/PGS019674.txt.gz
PGS019675
(TPMI_715.2_PRSmix+)
 PGP000835 |
Chen HH et al. Nature (2025)
 Ankylosing spondylitis ankylosing spondylitis 1,071,343
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019675/ScoringFiles/PGS019675.txt.gz
PGS019676
(TPMI_715.2_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Ankylosing spondylitis ankylosing spondylitis 940,059
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019676/ScoringFiles/PGS019676.txt.gz
PGS001268
(GBE_HC1242)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Ankylosing spondylitis (time-to-event) ankylosing spondylitis 10
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001268/ScoringFiles/PGS001268.txt.gz
PGS000353
(PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_P_5e-08_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Any cancer cancer 14
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000353/ScoringFiles/PGS000353.txt.gz
PGS000354
(PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_PRS-CS_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Any cancer cancer 1,118,667
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000354/ScoringFiles/PGS000354.txt.gz
PGS000355
(PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Any cancer cancer 15
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000355/ScoringFiles/PGS000355.txt.gz
PGS000356
(PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Any cancer cancer 179
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000356/ScoringFiles/PGS000356.txt.gz
PGS005252
(IAVGC_AS_PRS)
 PGP000745 |
Small AM et al. Nat Genet (2025)
 Aortic stenosis aortic stenosis 1,119,377
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005252/ScoringFiles/PGS005252.txt.gz
PGS005254
(aortic_stenosis)
 PGP000747 |
Kany S et al. Nat Genet (2025)
 Aortic stenosis aortic stenosis 1,110,912
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005254/ScoringFiles/PGS005254.txt.gz
PGS005257
(aortic_valve_area)
 PGP000747 |
Kany S et al. Nat Genet (2025)
 Aortic valve area aortic measurement 1,111,632
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005257/ScoringFiles/PGS005257.txt.gz
PGS001888
(portability-PLR_apoA)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Apolipoprotein A apolipoprotein A 1 measurement 74,596
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001888/ScoringFiles/PGS001888.txt.gz
PGS002101
(portability-ldpred2_apoA)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Apolipoprotein A apolipoprotein A 1 measurement 681,234
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002101/ScoringFiles/PGS002101.txt.gz
PGS003491
(cont-decay-apoA)
 PGP000457 |
Ding Y et al. Nature (2023)
 Apolipoprotein A apolipoprotein A-IV measurement 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003491/ScoringFiles/PGS003491.txt.gz
PGS000671
(snpnet.Apolipoprotein_A)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Apolipoprotein A [g/L] apolipoprotein A 1 measurement 19,324
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000671/ScoringFiles/PGS000671.txt.gz - Check Terms/Licenses
PGS001889
(portability-PLR_apoB)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Apolipoprotein B apolipoprotein B measurement 16,952
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001889/ScoringFiles/PGS001889.txt.gz
PGS002102
(portability-ldpred2_apoB)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Apolipoprotein B apolipoprotein B measurement 315,483
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002102/ScoringFiles/PGS002102.txt.gz
PGS003492
(cont-decay-apoB)
 PGP000457 |
Ding Y et al. Nature (2023)
 Apolipoprotein B apolipoprotein B measurement 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003492/ScoringFiles/PGS003492.txt.gz
PGS000672
(snpnet.Apolipoprotein_B_adjstatins)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Apolipoprotein B [g/L] (statin adjusted) apolipoprotein B measurement 18,666
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000672/ScoringFiles/PGS000672.txt.gz - Check Terms/Licenses
PGS001786
(1kgeur_gbmi_leaveUKBBout_Appendectomy_pst_eff_a1_b0.5_phiauto)
 PGP000262 |
Wang Y et al. Cell Genom (2023)
 Appendectomy appendectomy 899,660
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001786/ScoringFiles/PGS001786.txt.gz
PGS001853
(portability-PLR_540)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Appendiceal conditions disorder of appendix 19
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001853/ScoringFiles/PGS001853.txt.gz
PGS002064
(portability-ldpred2_540)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Appendiceal conditions disorder of appendix 497,422
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002064/ScoringFiles/PGS002064.txt.gz
PGS004876
(INTERVENE_MegaPRS_Appendicitis)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 Appendicitis appendicitis 601,835
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004876/ScoringFiles/PGS004876.txt.gz
PGS005315
(ALM_PRS)
 PGP000766 |
Türkmen D et al. Pharmacogenomics J (2024)
 Appendicular lean mass lean body mass 630
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005315/ScoringFiles/PGS005315.txt.gz
PGS001165
(GBE_INI23125)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Arm fat free mass (L) lean body mass 30,360
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001165/ScoringFiles/PGS001165.txt.gz
PGS003920
(INI23125)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Arm fat-free mass (L) lean body mass 39,276
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003920/ScoringFiles/PGS003920.txt.gz
PGS004399
(X23125.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Arm fat-free mass (left) lean body mass 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004399/ScoringFiles/PGS004399.txt.gz
PGS001146
(GBE_INI23121)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Arm fat-free mass (R) fat pad mass 29,063
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001146/ScoringFiles/PGS001146.txt.gz
PGS003917
(INI23121)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Arm fat-free mass (R) lean body mass 38,650
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003917/ScoringFiles/PGS003917.txt.gz
PGS004395
(X23121.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Arm fat-free mass (right) lean body mass 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004395/ScoringFiles/PGS004395.txt.gz
PGS001144
(GBE_INI23124)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Arm fat mass (L) fat pad mass 23,676
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001144/ScoringFiles/PGS001144.txt.gz
PGS003919
(INI23124)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Arm fat mass (L) fat pad mass 29,392
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003919/ScoringFiles/PGS003919.txt.gz
Showing 301 to 350 of 6982 rows