Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS001160
(GBE_INI23130)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Trunk mass (predicted) body composition measurement 32,685
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001160/ScoringFiles/PGS001160.txt.gz
PGS004404
(X23130.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Trunk predicted mass body weights and measures 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004404/ScoringFiles/PGS004404.txt.gz
PGS000289
(TNFSF14)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Tumor necrosis factor ligand superfamily member 14 (TNFSF14) serum levels blood protein measurement 552,048
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000289/ScoringFiles/PGS000289.txt.gz
PGS000287
(TNF-R1)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Tumor necrosis factor receptor 1 (TNF-R1) serum levels blood protein measurement 552,317
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000287/ScoringFiles/PGS000287.txt.gz
PGS000288
(TNF-R2)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Tumor necrosis factor receptor 2 (TNF-R2) serum levels blood protein measurement 552,185
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000288/ScoringFiles/PGS000288.txt.gz
PGS000223
(CD40)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Tumor necrosis factor receptor superfamily member 5 (CD40) serum levels blood protein measurement 552,187
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000223/ScoringFiles/PGS000223.txt.gz
PGS000238
(FAS)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Tumor necrosis factor receptor superfamily member 6 (FAS) serum levels blood protein measurement 552,335
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000238/ScoringFiles/PGS000238.txt.gz
PGS000839
(2H_Glucose)
 PGP000211 |
Aly DM et al. Nat Genet (2021)
 Two hour glucose during OGTT glucose tolerance test 219
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000839/ScoringFiles/PGS000839.txt.gz
PGS002787
(BD1_SDPR)
 PGP000370 |
Gui Y et al. Transl Psychiatry (2022)
 Type 1 bipolar disorder bipolar I disorder 937,511
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002787/ScoringFiles/PGS002787.txt.gz
PGS004171
(t1d_1)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Type 1 diabetes type 1 diabetes mellitus 520
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004171/ScoringFiles/PGS004171.txt.gz
PGS004172
(t1d_2)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Type 1 diabetes type 1 diabetes mellitus 70
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004172/ScoringFiles/PGS004172.txt.gz
PGS004173
(t1d_3)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Type 1 diabetes type 1 diabetes mellitus 295
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004173/ScoringFiles/PGS004173.txt.gz
PGS004174
(t1d_4)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Type 1 diabetes type 1 diabetes mellitus 49
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004174/ScoringFiles/PGS004174.txt.gz
PGS004175
(t1d_5)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Type 1 diabetes type 1 diabetes mellitus 315
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004175/ScoringFiles/PGS004175.txt.gz
PGS000021
(GRS1)
 PGP000011 |
Oram RA et al. Diabetes Care (2015)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 30
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000021/ScoringFiles/PGS000021.txt.gz
PGS000022
(T1D_GRS)
 PGP000012 |
Perry DJ et al. Sci Rep (2018)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 37
-
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000022/ScoringFiles/PGS000022.txt.gz
PGS000023
(AA_GRS)
 PGP000013 |
Onengut-Gumuscu S et al. Diabetes Care (2019)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 7
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000023/ScoringFiles/PGS000023.txt.gz
PGS000024
(GRS2)
 PGP000014 |
Sharp SA et al. Diabetes Care (2019)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 67
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000024/ScoringFiles/PGS000024.txt.gz
PGS000833
(T1D)
 PGP000211 |
Aly DM et al. Nat Genet (2021)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 66
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000833/ScoringFiles/PGS000833.txt.gz
PGS000869
(T1D_48)
 PGP000214 |
Aksit MA et al. J Clin Endocrinol Metab (2020)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 48
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000869/ScoringFiles/PGS000869.txt.gz
PGS001297
(GBE_HC337)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 69
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001297/ScoringFiles/PGS001297.txt.gz
PGS001817
(portability-PLR_250.1)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 825
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001817/ScoringFiles/PGS001817.txt.gz
PGS002025
(portability-ldpred2_250.1)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 106,800
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002025/ScoringFiles/PGS002025.txt.gz
PGS003749
(ModelT1D_under25)
 PGP000472 |
Shoaib M et al. Genet Epidemiol (2023)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 6,612
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003749/ScoringFiles/PGS003749.txt.gz
PGS003750
(ModelT1D)
 PGP000472 |
Shoaib M et al. Genet Epidemiol (2023)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 7,835
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003750/ScoringFiles/PGS003750.txt.gz
PGS003993
(dbslmm.auto.GCST90013445.T1D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 63,182
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003993/ScoringFiles/PGS003993.txt.gz
PGS004009
(lassosum.auto.GCST90013445.T1D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 4,031
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004009/ScoringFiles/PGS004009.txt.gz
PGS004020
(lassosum.CV.GCST90013445.T1D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 6,682
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004020/ScoringFiles/PGS004020.txt.gz
PGS004035
(ldpred2.auto.GCST90013445.T1D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 56,562
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004035/ScoringFiles/PGS004035.txt.gz
PGS004063
(megaprs.auto.GCST90013445.T1D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 56,288
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004063/ScoringFiles/PGS004063.txt.gz
PGS004078
(megaprs.CV.GCST90013445.T1D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 56,288
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004078/ScoringFiles/PGS004078.txt.gz
PGS004093
(prscs.auto.GCST90013445.T1D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 61,651
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004093/ScoringFiles/PGS004093.txt.gz
PGS004102
(prscs.CV.GCST90013445.T1D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 61,651
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004102/ScoringFiles/PGS004102.txt.gz
PGS004117
(pt_clump.auto.GCST90013445.T1D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 131
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004117/ScoringFiles/PGS004117.txt.gz
PGS004132
(pt_clump_nested.CV.GCST90013445.T1D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 354
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004132/ScoringFiles/PGS004132.txt.gz
PGS004147
(sbayesr.auto.GCST90013445.T1D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 45,996
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004147/ScoringFiles/PGS004147.txt.gz
PGS004162
(UKBB_EnsPGS.GCST90013445.T1D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 62,645
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004162/ScoringFiles/PGS004162.txt.gz
PGS004874
(INTERVENE_MegaPRS_T1D)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 56,916
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004874/ScoringFiles/PGS004874.txt.gz
PGS002788
(BD2_SDPR)
 PGP000370 |
Gui Y et al. Transl Psychiatry (2022)
 Type 2 bipolar disorder bipolar II disorder 935,292
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002788/ScoringFiles/PGS002788.txt.gz
PGS004181
(t2d_1)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Type 2 diabetes type 2 diabetes mellitus 10,202
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004181/ScoringFiles/PGS004181.txt.gz
PGS004182
(t2d_2)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Type 2 diabetes type 2 diabetes mellitus 10,778
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004182/ScoringFiles/PGS004182.txt.gz
PGS004183
(t2d_3)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Type 2 diabetes type 2 diabetes mellitus 8,154
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004183/ScoringFiles/PGS004183.txt.gz
PGS004184
(t2d_4)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Type 2 diabetes type 2 diabetes mellitus 9,645
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004184/ScoringFiles/PGS004184.txt.gz
PGS004185
(t2d_5)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Type 2 diabetes type 2 diabetes mellitus 3,277
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004185/ScoringFiles/PGS004185.txt.gz
PGS004223
(PRS139_T2D)
 PGP000523 |
Lin J et al. Sci Total Environ (2023)
 Type 2 diabetes type 2 diabetes mellitus 139
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004223/ScoringFiles/PGS004223.txt.gz
PGS004225
(PRS46_T2DEastAsia)
 PGP000526 |
Liu J et al. Nutrients (2023)
 Type 2 diabetes type 2 diabetes mellitus 46
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004225/ScoringFiles/PGS004225.txt.gz
PGS004226
(PRS50_T2DEur)
 PGP000526 |
Liu J et al. Nutrients (2023)
 Type 2 diabetes type 2 diabetes mellitus 50
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004226/ScoringFiles/PGS004226.txt.gz
PGS004323
(PRS91_T2D)
 PGP000557 |
Tan Q et al. J Hazard Mater (2023)
 Type 2 diabetes type 2 diabetes mellitus 91
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004323/ScoringFiles/PGS004323.txt.gz
PGS000848
(T2D_Adiposity)
 PGP000211 |
Aly DM et al. Nat Genet (2021)
 Type 2 diabetes (based on SNPs associated with adiposity) type 2 diabetes mellitus 6
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000848/ScoringFiles/PGS000848.txt.gz
PGS000854
(T2D_BetaCell)
 PGP000211 |
Aly DM et al. Nat Genet (2021)
 Type 2 diabetes (based on SNPs associated with beta cell function) type 2 diabetes mellitus 27
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000854/ScoringFiles/PGS000854.txt.gz
Showing 4201 to 4250 of 4857 rows