Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS001532
(GBE_QT_FC10003466)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Time from waking to first cigarette smoking behaviour measurement 86
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001532/ScoringFiles/PGS001532.txt.gz
PGS001052
(GBE_INI1050)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Time spend outdoors in summer time spent outdoors measurement 5,661
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001052/ScoringFiles/PGS001052.txt.gz
PGS001053
(GBE_INI1060)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Time spend outdoors in winter time spent outdoors measurement 2,323
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001053/ScoringFiles/PGS001053.txt.gz
PGS001923
(portability-PLR_geek_time)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Time spent watching television (TV) or using computer lifestyle measurement 50,583
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001923/ScoringFiles/PGS001923.txt.gz
PGS002139
(portability-ldpred2_geek_time)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Time spent watching television (TV) or using computer lifestyle measurement 956,532
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002139/ScoringFiles/PGS002139.txt.gz
PGS001533
(GBE_QT_FC1004803)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Tinnitus severity Tinnitus 343
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001533/ScoringFiles/PGS001533.txt.gz
PGS000285
(TF)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Tissue factor (TF) serum levels blood protein measurement 552,228
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000285/ScoringFiles/PGS000285.txt.gz
PGS000292
(TRANCE)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 TNF-related activation-induced cytokine (TRANCE) serum levels blood protein measurement 552,090
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000292/ScoringFiles/PGS000292.txt.gz
PGS000291
(TRAIL-R2)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 TNF-related apoptosis-inducing ligand receptor 2 (TRAIL-R2) serum levels blood protein measurement 552,198
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000291/ScoringFiles/PGS000291.txt.gz
PGS000290
(TRAIL)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 TNF-related apoptosis-inducing ligand (TRAIL) serum levels blood protein measurement 552,279
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000290/ScoringFiles/PGS000290.txt.gz
PGS001830
(portability-PLR_318)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Tobacco use disorder nicotine dependence 13,838
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001830/ScoringFiles/PGS001830.txt.gz
PGS002037
(portability-ldpred2_318)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Tobacco use disorder nicotine dependence 847,691
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002037/ScoringFiles/PGS002037.txt.gz
PGS000359
(PRSWEB_PHECODE145.2_C3-TONGUENAS_PRS-CS_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Tongue cancer tongue neoplasm 931,954
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000359/ScoringFiles/PGS000359.txt.gz
PGS001942
(portability-PLR_log_bilirubin)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Total bilirubin bilirubin measurement 33,190
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001942/ScoringFiles/PGS001942.txt.gz
PGS002160
(portability-ldpred2_log_bilirubin)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Total bilirubin bilirubin measurement 120,068
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002160/ScoringFiles/PGS002160.txt.gz
PGS003524
(cont-decay-log_bilirubin)
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Total bilirubin bilirubin measurement 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003524/ScoringFiles/PGS003524.txt.gz
PGS004731
(Bilirubin_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total bilirubin bilirubin measurement 96,003
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004731/ScoringFiles/PGS004731.txt.gz
PGS004732
(Bilirubin_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total bilirubin bilirubin measurement 3,030,080
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004732/ScoringFiles/PGS004732.txt.gz
PGS000697
(snpnet.Total_bilirubin)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Total bilirubin [umol/L] bilirubin measurement 1,159
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000697/ScoringFiles/PGS000697.txt.gz - Check Terms/Licenses
PGS000062
(GRS_TC)
 PGP000045 |
Johnson L et al. PLoS One (2015)
 Total cholesterol total cholesterol measurement 52
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000062/ScoringFiles/PGS000062.txt.gz
PGS000311
(GRS234_TC)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 Total cholesterol total cholesterol measurement 234
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000311/ScoringFiles/PGS000311.txt.gz
PGS000658
(PRS-TC)
 PGP000121 |
Tam CHT et al. Genome Med (2021)
 Total cholesterol total cholesterol measurement 229
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000658/ScoringFiles/PGS000658.txt.gz
PGS000831
(Total_cholesterol_PGS)
 PGP000210 |
Zubair N et al. Sci Rep (2019)
 Total cholesterol total cholesterol measurement 1,032
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000831/ScoringFiles/PGS000831.txt.gz - Check Terms/Licenses
PGS002286
(GRS_286_TC)
 PGP000313 |
Kamiza AB et al. Nat Med (2022)
 Total cholesterol total cholesterol measurement 286
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002286/ScoringFiles/PGS002286.txt.gz
PGS002352
(biochemistry_Cholesterol.BOLT-LMM)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Total cholesterol total cholesterol measurement 1,109,311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002352/ScoringFiles/PGS002352.txt.gz
PGS002377
(biochemistry_Cholesterol.BOLT-LMM-BBJ)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Total cholesterol total cholesterol measurement 920,922
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002377/ScoringFiles/PGS002377.txt.gz
PGS002424
(biochemistry_Cholesterol.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Total cholesterol total cholesterol measurement 8,526
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002424/ScoringFiles/PGS002424.txt.gz
PGS002473
(biochemistry_Cholesterol.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Total cholesterol total cholesterol measurement 22,547
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002473/ScoringFiles/PGS002473.txt.gz
PGS002522
(biochemistry_Cholesterol.P+T.0.01)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Total cholesterol total cholesterol measurement 109,026
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002522/ScoringFiles/PGS002522.txt.gz
PGS002571
(biochemistry_Cholesterol.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Total cholesterol total cholesterol measurement 3,573
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002571/ScoringFiles/PGS002571.txt.gz
PGS002620
(biochemistry_Cholesterol.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Total cholesterol total cholesterol measurement 2,571
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002620/ScoringFiles/PGS002620.txt.gz
PGS002669
(biochemistry_Cholesterol.PolyFun-pred)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Total cholesterol total cholesterol measurement 309,475
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002669/ScoringFiles/PGS002669.txt.gz
PGS002718
(biochemistry_Cholesterol.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Total cholesterol total cholesterol measurement 977,049
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002718/ScoringFiles/PGS002718.txt.gz
PGS002783
(GLGC_2021_ALL_TC_PRS_weights_PT)
 PGP000366 |
Kanoni S et al. Genome Biol (2022)
 Total cholesterol total cholesterol measurement 10,699
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002783/ScoringFiles/PGS002783.txt.gz
PGS003134
(ExPRSweb_TC_30690-irnt_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Total cholesterol total cholesterol measurement 585,328
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003134/ScoringFiles/PGS003134.txt.gz
PGS003135
(ExPRSweb_TC_30690-irnt_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Total cholesterol total cholesterol measurement 2,822
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003135/ScoringFiles/PGS003135.txt.gz
PGS003136
(ExPRSweb_TC_30690-irnt_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Total cholesterol total cholesterol measurement 3,566
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003136/ScoringFiles/PGS003136.txt.gz
PGS003137
(ExPRSweb_TC_30690-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Total cholesterol total cholesterol measurement 7,459,292
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003137/ScoringFiles/PGS003137.txt.gz
PGS003138
(ExPRSweb_TC_30690-irnt_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Total cholesterol total cholesterol measurement 1,113,831
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003138/ScoringFiles/PGS003138.txt.gz
PGS003139
(ExPRSweb_TC_30690-raw_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Total cholesterol total cholesterol measurement 569,518
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003139/ScoringFiles/PGS003139.txt.gz
PGS003140
(ExPRSweb_TC_30690-raw_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Total cholesterol total cholesterol measurement 2,863
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003140/ScoringFiles/PGS003140.txt.gz
PGS003141
(ExPRSweb_TC_30690-raw_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Total cholesterol total cholesterol measurement 3,604
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003141/ScoringFiles/PGS003141.txt.gz
PGS003142
(ExPRSweb_TC_30690-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Total cholesterol total cholesterol measurement 7,459,288
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003142/ScoringFiles/PGS003142.txt.gz
PGS003143
(ExPRSweb_TC_30690-raw_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Total cholesterol total cholesterol measurement 1,113,831
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003143/ScoringFiles/PGS003143.txt.gz
PGS003341
(CVGRS_TC)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 Total cholesterol total cholesterol measurement 91
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003341/ScoringFiles/PGS003341.txt.gz
PGS003350
(ALLGRS_TC)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 Total cholesterol total cholesterol measurement 102
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003350/ScoringFiles/PGS003350.txt.gz
PGS003481
(LDPred2_TC)
 PGP000456 |
Zhang Y et al. EBioMedicine (2022)
 Total cholesterol total cholesterol measurement 842,513
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003481/ScoringFiles/PGS003481.txt.gz
PGS003818
(TC_EUR_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 4,691
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003818/ScoringFiles/PGS003818.txt.gz
PGS003819
(TC_EUR_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,490,151
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003819/ScoringFiles/PGS003819.txt.gz
PGS003820
(TC_AFR_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 218
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003820/ScoringFiles/PGS003820.txt.gz
Showing 4201 to 4250 of 5022 rows