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PGS Catalog
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Polygenic Scores (PGS)
Polygenic Scores (PGS)
Filter PGS by Participant Ancestry
Individuals included in:
Any Stage [G, D, E]
All Stages combined [G + D + E]
Development [G, D]
- GWAS [G]
- Score development [D]
PGS Evaluation [E]
G
- Source of Variant Associations (
G
WAS)
D
- Score
D
evelopment/Training
E
- PGS
E
valuation
List of ancestries includes:
--
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Display options:
Show European ancestry data
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only
Multi-ancestry data
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name
PGS Publication ID
(PGP)
Reported Trait
Mapped Trait(s)
(Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File
(FTP Link)
PGS004235
(SBP_MVP)
PGP000531
|
Kurniansyah N
et al.
Nat Commun (2022)
Systolic blood pressure
systolic blood pressure
24,807
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004235/ScoringFiles/PGS004235.txt.gz
PGS004594
(ukb.sbp.female)
PGP000574
|
Nurkkala J
et al.
J Hypertens (2022)
Systolic blood pressure
systolic blood pressure
1,097,355
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004594/ScoringFiles/PGS004594.txt.gz
PGS004603
(SBP-meta-analysis)
PGP000581
|
Keaton JM
et al.
Nat Genet (2024)
Systolic blood pressure
systolic blood pressure
7,356,519
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004603/ScoringFiles/PGS004603.txt.gz
PGS004829
(sbp_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Systolic blood pressure
systolic blood pressure
1,194,211
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004829/ScoringFiles/PGS004829.txt.gz
PGS004830
(sbp_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Systolic blood pressure
systolic blood pressure
4,805,129
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004830/ScoringFiles/PGS004830.txt.gz
PGS004831
(sbp_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Systolic blood pressure
systolic blood pressure
3,827,774
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004831/ScoringFiles/PGS004831.txt.gz
PGS004832
(sbp_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Systolic blood pressure
systolic blood pressure
6,013,177
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004832/ScoringFiles/PGS004832.txt.gz
PGS005008
(mean_Systolic_INT_ldpred_AFRss_afrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Systolic blood pressure
systolic blood pressure
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005008/ScoringFiles/PGS005008.txt.gz
PGS005009
(mean_Systolic_INT_ldpred_EURss_eurld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Systolic blood pressure
systolic blood pressure
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005009/ScoringFiles/PGS005009.txt.gz
PGS005010
(mean_Systolic_INT_ldpred_HISss_amrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Systolic blood pressure
systolic blood pressure
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005010/ScoringFiles/PGS005010.txt.gz
PGS005011
(mean_Systolic_INT_ldpred_METAss_afrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Systolic blood pressure
systolic blood pressure
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005011/ScoringFiles/PGS005011.txt.gz
PGS005012
(mean_Systolic_INT_ldpred_METAss_amrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Systolic blood pressure
systolic blood pressure
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005012/ScoringFiles/PGS005012.txt.gz
PGS005013
(mean_Systolic_INT_ldpred_METAss_eurld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Systolic blood pressure
systolic blood pressure
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005013/ScoringFiles/PGS005013.txt.gz
PGS005014
(mean_Systolic_INT_prscs_AFRss_afrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Systolic blood pressure
systolic blood pressure
1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005014/ScoringFiles/PGS005014.txt.gz
PGS005015
(mean_Systolic_INT_prscs_EURss_eurld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Systolic blood pressure
systolic blood pressure
1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005015/ScoringFiles/PGS005015.txt.gz
PGS005016
(mean_Systolic_INT_prscs_HISss_amrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Systolic blood pressure
systolic blood pressure
1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005016/ScoringFiles/PGS005016.txt.gz
PGS005017
(mean_Systolic_INT_prscs_METAss_afrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Systolic blood pressure
systolic blood pressure
1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005017/ScoringFiles/PGS005017.txt.gz
PGS005018
(mean_Systolic_INT_prscs_METAss_amrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Systolic blood pressure
systolic blood pressure
1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005018/ScoringFiles/PGS005018.txt.gz
PGS005019
(mean_Systolic_INT_prscs_METAss_eurld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Systolic blood pressure
systolic blood pressure
1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005019/ScoringFiles/PGS005019.txt.gz
PGS005020
(mean_Systolic_INT_prscsx_METAweight)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Systolic blood pressure
systolic blood pressure
1,277,825
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005020/ScoringFiles/PGS005020.txt.gz
PGS005120
(PGS_Teixeira_2024_SBP)
PGP000702
|
Teixeira SK
et al.
Sci Rep (2024)
Systolic blood pressure
systolic blood pressure
944,279
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005120/ScoringFiles/PGS005120.txt.gz
PGS002009
(portability-PLR_systolic_BP)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Systolic blood pressure, automated reading
systolic blood pressure
68,449
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002009/ScoringFiles/PGS002009.txt.gz
PGS002228
(portability-ldpred2_systolic_BP)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Systolic blood pressure, automated reading
systolic blood pressure
937,030
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002228/ScoringFiles/PGS002228.txt.gz
PGS003571
(cont-decay-systolic_BP)
PGP000457
|
Ding Y
et al.
bioRxiv (2022)
|
Pre
Systolic blood pressure, automated reading
systolic blood pressure
979,739
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003571/ScoringFiles/PGS003571.txt.gz
PGS004372
(X4080.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
Systolic blood pressure, automated reading
systolic blood pressure
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004372/ScoringFiles/PGS004372.txt.gz
PGS000900
(PRS_SBP_f)
PGP000233
|
Kauko A
et al.
Hypertension (2021)
Systolic blood pressure (female)
systolic blood pressure
,
female
1,098,015
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000900/ScoringFiles/PGS000900.txt.gz
PGS000901
(PRS_SBP_m)
PGP000233
|
Kauko A
et al.
Hypertension (2021)
Systolic blood pressure (male)
systolic blood pressure
,
male
1,098,015
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000901/ScoringFiles/PGS000901.txt.gz
PGS001134
(GBE_INI4080)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Systolic BP (AR)
systolic blood pressure
15,481
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001134/ScoringFiles/PGS001134.txt.gz
PGS000712
(T2D_HbA1c_39)
PGP000128
|
Sinnott-Armstrong N
et al.
Nat Genet (2021)
T2D (cases vs HbA1c filtered controls)
type 2 diabetes mellitus
183,695
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000712/ScoringFiles/PGS000712.txt.gz
- Check
Terms/Licenses
PGS004500
(disease.T84.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
T84 (Complications of internal orthopaedic prosthetic devices, implants and grafts)
device complication
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004500/ScoringFiles/PGS004500.txt.gz
PGS004570
(meta.T84.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
T84 (Complications of internal orthopaedic prosthetic devices, implants and grafts)
device complication
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004570/ScoringFiles/PGS004570.txt.gz
PGS001118
(GBE_BIN_FC10002492)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Taking other prescription medications
drug use measurement
1,846
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001118/ScoringFiles/PGS001118.txt.gz
PGS002350
(pigment_TANNING.BOLT-LMM)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Tanning
suntan
1,109,311
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002350/ScoringFiles/PGS002350.txt.gz
PGS002422
(pigment_TANNING.P+T.0.0001)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Tanning
suntan
8,273
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002422/ScoringFiles/PGS002422.txt.gz
PGS002471
(pigment_TANNING.P+T.0.001)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Tanning
suntan
20,040
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002471/ScoringFiles/PGS002471.txt.gz
PGS002520
(pigment_TANNING.P+T.0.01)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Tanning
suntan
100,837
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002520/ScoringFiles/PGS002520.txt.gz
PGS002569
(pigment_TANNING.P+T.1e-06)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Tanning
suntan
4,792
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002569/ScoringFiles/PGS002569.txt.gz
PGS002618
(pigment_TANNING.P+T.5e-08)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Tanning
suntan
4,026
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002618/ScoringFiles/PGS002618.txt.gz
PGS002667
(pigment_TANNING.PolyFun-pred)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Tanning
suntan
123,613
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002667/ScoringFiles/PGS002667.txt.gz
PGS002716
(pigment_TANNING.SBayesR)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Tanning
suntan
947,237
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002716/ScoringFiles/PGS002716.txt.gz
PGS000994
(GBE_INI1488)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Tea intake
tea consumption measurement
3,119
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000994/ScoringFiles/PGS000994.txt.gz
PGS000086
(CC_Testis)
PGP000050
|
Graff RE
et al.
Nat Commun (2021)
Testicular cancer
testicular carcinoma
,
Testicular Germ Cell Tumor
52
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000086/ScoringFiles/PGS000086.txt.gz
PGS000796
(CC_Testis_IV)
PGP000186
|
Kachuri L
et al.
Nat Commun (2020)
Testicular cancer
testicular carcinoma
,
Testicular Germ Cell Tumor
52
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000796/ScoringFiles/PGS000796.txt.gz
PGS001164
(GBE_cancer1045)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Testicular cancer
testicular carcinoma
280
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001164/ScoringFiles/PGS001164.txt.gz
PGS001914
(portability-PLR_F_log_testosterone)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Testosterone (female only)
testosterone measurement
,
female
18,179
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001914/ScoringFiles/PGS001914.txt.gz
PGS002130
(portability-ldpred2_F_log_testosterone)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Testosterone (female only)
testosterone measurement
,
female
650,195
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002130/ScoringFiles/PGS002130.txt.gz
PGS003507
(cont-decay-F_log_testosterone)
PGP000457
|
Ding Y
et al.
bioRxiv (2022)
|
Pre
Testosterone (female only)
testosterone measurement
979,739
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003507/ScoringFiles/PGS003507.txt.gz
PGS001988
(portability-PLR_M_log_testosterone)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Testosterone (male only)
testosterone measurement
,
male
3,985
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001988/ScoringFiles/PGS001988.txt.gz
PGS002205
(portability-ldpred2_M_log_testosterone)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Testosterone (male only)
testosterone measurement
,
male
584,991
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002205/ScoringFiles/PGS002205.txt.gz
PGS003559
(cont-decay-M_log_testosterone)
PGP000457
|
Ding Y
et al.
bioRxiv (2022)
|
Pre
Testosterone (male only)
testosterone measurement
979,739
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003559/ScoringFiles/PGS003559.txt.gz
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