Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS003821
(TC_AFR_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,687,775
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003821/ScoringFiles/PGS003821.txt.gz
PGS003822
(TC_AFR_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,687,775
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003822/ScoringFiles/PGS003822.txt.gz
PGS003823
(TC_AFR_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,155,228
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003823/ScoringFiles/PGS003823.txt.gz
PGS003824
(TC_AFR_CTSLEB)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,122,865
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003824/ScoringFiles/PGS003824.txt.gz
PGS003825
(TC_EAS_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 230
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003825/ScoringFiles/PGS003825.txt.gz
PGS003826
(TC_EAS_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 820,996
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003826/ScoringFiles/PGS003826.txt.gz
PGS003827
(TC_EAS_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 820,996
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003827/ScoringFiles/PGS003827.txt.gz
PGS003828
(TC_EAS_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,155,228
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003828/ScoringFiles/PGS003828.txt.gz
PGS003829
(TC_EAS_CTSLEB)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 431,780
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003829/ScoringFiles/PGS003829.txt.gz
PGS003830
(TC_SAS_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 32
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003830/ScoringFiles/PGS003830.txt.gz
PGS003831
(TC_SAS_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,468,958
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003831/ScoringFiles/PGS003831.txt.gz
PGS003832
(TC_SAS_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,468,958
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003832/ScoringFiles/PGS003832.txt.gz
PGS003833
(TC_SAS_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,155,228
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003833/ScoringFiles/PGS003833.txt.gz
PGS003834
(TC_SAS_CTSLEB)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 770,490
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003834/ScoringFiles/PGS003834.txt.gz
PGS003853
(PRS60_TC)
 PGP000493 |
Li J et al. JAMA Netw Open (2023)
 Total cholesterol total cholesterol measurement 60
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003853/ScoringFiles/PGS003853.txt.gz
PGS004667
(TC_AFR_lassosum2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 1,830
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004667/ScoringFiles/PGS004667.txt.gz
PGS004668
(TC_AFR_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 1,691,065
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004668/ScoringFiles/PGS004668.txt.gz
PGS004669
(TC_AFR_PROSPER)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 1,728,954
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004669/ScoringFiles/PGS004669.txt.gz
PGS004670
(TC_AFR_weighted_lassosum2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 158,252
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004670/ScoringFiles/PGS004670.txt.gz
PGS004671
(TC_AFR_weighted_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 1,872,229
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004671/ScoringFiles/PGS004671.txt.gz
PGS004672
(TC_EAS_lassosum2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 65,005
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004672/ScoringFiles/PGS004672.txt.gz
PGS004673
(TC_EAS_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 823,148
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004673/ScoringFiles/PGS004673.txt.gz
PGS004674
(TC_EAS_PROSPER)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 1,728,954
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004674/ScoringFiles/PGS004674.txt.gz
PGS004675
(TC_EAS_weighted_lassosum2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 158,252
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004675/ScoringFiles/PGS004675.txt.gz
PGS004676
(TC_EAS_weighted_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 1,872,229
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004676/ScoringFiles/PGS004676.txt.gz
PGS004677
(TC_SAS_lassosum2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 2,421
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004677/ScoringFiles/PGS004677.txt.gz
PGS004678
(TC_SAS_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 1,471,975
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004678/ScoringFiles/PGS004678.txt.gz
PGS004679
(TC_SAS_PROSPER)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 1,728,954
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004679/ScoringFiles/PGS004679.txt.gz
PGS004680
(TC_SAS_weighted_lassosum2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 158,252
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004680/ScoringFiles/PGS004680.txt.gz
PGS004681
(TC_SAS_weighted_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 1,872,229
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004681/ScoringFiles/PGS004681.txt.gz
PGS004841
(tc_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total cholesterol total cholesterol measurement 1,051,726
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004841/ScoringFiles/PGS004841.txt.gz
PGS004842
(tc_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total cholesterol total cholesterol measurement 6,439,132
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004842/ScoringFiles/PGS004842.txt.gz
PGS004843
(tc_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total cholesterol total cholesterol measurement 4,136,795
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004843/ScoringFiles/PGS004843.txt.gz
PGS004844
(tc_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total cholesterol total cholesterol measurement 6,149,012
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004844/ScoringFiles/PGS004844.txt.gz
PGS002750
(PRS37_THR)
 PGP000362 |
Lacaze P et al. Arthritis Rheumatol (2022)
 Total hip replacement total hip arthroplasty,
osteoarthritis, hip		 37
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002750/ScoringFiles/PGS002750.txt.gz
PGS002749
(PRS10_TKR)
 PGP000362 |
Lacaze P et al. Arthritis Rheumatol (2022)
 Total knee replacement osteoarthritis, knee,
total knee arthroplasty		 10
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002749/ScoringFiles/PGS002749.txt.gz
PGS002001
(portability-PLR_protein)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Total protein total blood protein measurement 69,557
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002001/ScoringFiles/PGS002001.txt.gz
PGS002219
(portability-ldpred2_protein)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Total protein total blood protein measurement 819,013
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002219/ScoringFiles/PGS002219.txt.gz
PGS004341
(X30860.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Total protein (g/L) total blood protein measurement 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004341/ScoringFiles/PGS004341.txt.gz
PGS000698
(snpnet.Total_protein)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Total protein [g/L] total blood protein measurement 16,420
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000698/ScoringFiles/PGS000698.txt.gz - Check Terms/Licenses
PGS004849
(Total_protein_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total protein measurement total blood protein measurement 2,167,123
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004849/ScoringFiles/PGS004849.txt.gz
PGS004850
(Total_protein_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total protein measurement total blood protein measurement 937,777
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004850/ScoringFiles/PGS004850.txt.gz
PGS004851
(TotalProtein_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total protein measurement total blood protein measurement 593,738
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004851/ScoringFiles/PGS004851.txt.gz
PGS004852
(TotalProtein_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total protein measurement total blood protein measurement 724,061
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004852/ScoringFiles/PGS004852.txt.gz
PGS001534
(GBE_INI25781)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Total Volume of white matter hyperintensities (from T1 and T2 FLAIR images) neuroimaging measurement,
white matter hyperintensity measurement		 355
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001534/ScoringFiles/PGS001534.txt.gz
PGS002287
(GRS_286_TG)
 PGP000313 |
Kamiza AB et al. Nat Med (2022)
 Triglyceride triglyceride measurement 286
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002287/ScoringFiles/PGS002287.txt.gz
PGS003881
(TG_lassosum2_ARB)
 PGP000501 |
Shim I et al. Nature Communications (2023)
 Triglyceride triglyceride measurement 54,623
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003881/ScoringFiles/PGS003881.txt.gz
PGS003340
(CVGRS_TG)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 Triglyceride level triglyceride measurement 65
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003340/ScoringFiles/PGS003340.txt.gz
PGS003349
(ALLGRS_TG)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 Triglyceride level triglyceride measurement 76
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003349/ScoringFiles/PGS003349.txt.gz
PGS003401
(TG.PS)
 PGP000418 |
Pieri K et al. Int J Cardiol (2022)
 Triglyceride levels triglyceride measurement 108
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003401/ScoringFiles/PGS003401.txt.gz
Showing 4251 to 4300 of 5022 rows