Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS005017
(mean_Systolic_INT_prscs_METAss_afrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Systolic blood pressure systolic blood pressure 1,273,897
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005017/ScoringFiles/PGS005017.txt.gz
PGS005018
(mean_Systolic_INT_prscs_METAss_amrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Systolic blood pressure systolic blood pressure 1,273,897
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005018/ScoringFiles/PGS005018.txt.gz
PGS005019
(mean_Systolic_INT_prscs_METAss_eurld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Systolic blood pressure systolic blood pressure 1,273,897
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005019/ScoringFiles/PGS005019.txt.gz
PGS005020
(mean_Systolic_INT_prscsx_METAweight)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Systolic blood pressure systolic blood pressure 1,277,825
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005020/ScoringFiles/PGS005020.txt.gz
PGS005120
(PGS_Teixeira_2024_SBP)
 PGP000702 |
Teixeira SK et al. Sci Rep (2024)
 Systolic blood pressure systolic blood pressure 944,279
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005120/ScoringFiles/PGS005120.txt.gz
PGS005321
(SBP_PRS)
 PGP000766 |
Türkmen D et al. Pharmacogenomics J (2024)
 Systolic blood pressure systolic blood pressure 240
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005321/ScoringFiles/PGS005321.txt.gz
PGS005350
(SBP)
 PGP000772 |
Øvretveit K et al. Eur J Prev Cardiol (2024)
 Systolic blood pressure systolic blood pressure 1,022,624
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005350/ScoringFiles/PGS005350.txt.gz
PGS002009
(portability-PLR_systolic_BP)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Systolic blood pressure, automated reading systolic blood pressure 68,449
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002009/ScoringFiles/PGS002009.txt.gz
PGS002228
(portability-ldpred2_systolic_BP)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Systolic blood pressure, automated reading systolic blood pressure 937,030
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002228/ScoringFiles/PGS002228.txt.gz
PGS003571
(cont-decay-systolic_BP)
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Systolic blood pressure, automated reading systolic blood pressure 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003571/ScoringFiles/PGS003571.txt.gz
PGS004372
(X4080.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Systolic blood pressure, automated reading systolic blood pressure 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004372/ScoringFiles/PGS004372.txt.gz
PGS000900
(PRS_SBP_f)
 PGP000233 |
Kauko A et al. Hypertension (2021)
 Systolic blood pressure (female) systolic blood pressure,
female		 1,098,015
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000900/ScoringFiles/PGS000900.txt.gz
PGS000901
(PRS_SBP_m)
 PGP000233 |
Kauko A et al. Hypertension (2021)
 Systolic blood pressure (male) systolic blood pressure,
male		 1,098,015
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000901/ScoringFiles/PGS000901.txt.gz
PGS001134
(GBE_INI4080)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Systolic BP (AR) systolic blood pressure 15,481
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001134/ScoringFiles/PGS001134.txt.gz
PGS000712
(T2D_HbA1c_39)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 T2D (cases vs HbA1c filtered controls) type 2 diabetes mellitus 183,695
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000712/ScoringFiles/PGS000712.txt.gz - Check Terms/Licenses
PGS004500
(disease.T84.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 T84 (Complications of internal orthopaedic prosthetic devices, implants and grafts) device complication 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004500/ScoringFiles/PGS004500.txt.gz
PGS004570
(meta.T84.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 T84 (Complications of internal orthopaedic prosthetic devices, implants and grafts) device complication 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004570/ScoringFiles/PGS004570.txt.gz
PGS001118
(GBE_BIN_FC10002492)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Taking other prescription medications drug use measurement 1,846
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001118/ScoringFiles/PGS001118.txt.gz
PGS002350
(pigment_TANNING.BOLT-LMM)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Tanning suntan 1,109,311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002350/ScoringFiles/PGS002350.txt.gz
PGS002422
(pigment_TANNING.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Tanning suntan 8,273
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002422/ScoringFiles/PGS002422.txt.gz
PGS002471
(pigment_TANNING.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Tanning suntan 20,040
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002471/ScoringFiles/PGS002471.txt.gz
PGS002520
(pigment_TANNING.P+T.0.01)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Tanning suntan 100,837
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002520/ScoringFiles/PGS002520.txt.gz
PGS002569
(pigment_TANNING.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Tanning suntan 4,792
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002569/ScoringFiles/PGS002569.txt.gz
PGS002618
(pigment_TANNING.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Tanning suntan 4,026
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002618/ScoringFiles/PGS002618.txt.gz
PGS002667
(pigment_TANNING.PolyFun-pred)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Tanning suntan 123,613
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002667/ScoringFiles/PGS002667.txt.gz
PGS002716
(pigment_TANNING.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Tanning suntan 947,237
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002716/ScoringFiles/PGS002716.txt.gz
PGS000994
(GBE_INI1488)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Tea intake tea consumption measurement 3,119
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000994/ScoringFiles/PGS000994.txt.gz
PGS000086
(CC_Testis)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Testicular cancer testicular cancer,
testicular germ cell tumor		 52
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000086/ScoringFiles/PGS000086.txt.gz
PGS000796
(CC_Testis_IV)
 PGP000186 |
Kachuri L et al. Nat Commun (2020)
 Testicular cancer testicular cancer,
testicular germ cell tumor		 52
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000796/ScoringFiles/PGS000796.txt.gz
PGS001164
(GBE_cancer1045)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Testicular cancer testicular cancer 280
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001164/ScoringFiles/PGS001164.txt.gz
PGS001914
(portability-PLR_F_log_testosterone)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Testosterone (female only) testosterone measurement,
female		 18,179
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001914/ScoringFiles/PGS001914.txt.gz
PGS002130
(portability-ldpred2_F_log_testosterone)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Testosterone (female only) testosterone measurement,
female		 650,195
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002130/ScoringFiles/PGS002130.txt.gz
PGS003507
(cont-decay-F_log_testosterone)
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Testosterone (female only) testosterone measurement 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003507/ScoringFiles/PGS003507.txt.gz
PGS001988
(portability-PLR_M_log_testosterone)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Testosterone (male only) testosterone measurement,
male		 3,985
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001988/ScoringFiles/PGS001988.txt.gz
PGS002205
(portability-ldpred2_M_log_testosterone)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Testosterone (male only) testosterone measurement,
male		 584,991
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002205/ScoringFiles/PGS002205.txt.gz
PGS003559
(cont-decay-M_log_testosterone)
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Testosterone (male only) testosterone measurement 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003559/ScoringFiles/PGS003559.txt.gz
PGS000696
(snpnet.Testosterone)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Testosterone [nmol/L] testosterone measurement 8,223
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000696/ScoringFiles/PGS000696.txt.gz - Check Terms/Licenses
PGS003124
(ExPRSweb_Thinness_STILTS-UKHLS_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Thinness body mass index 224,595
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003124/ScoringFiles/PGS003124.txt.gz
PGS003125
(ExPRSweb_Thinness_STILTS-UKHLS_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Thinness body mass index 256
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003125/ScoringFiles/PGS003125.txt.gz
PGS003126
(ExPRSweb_Thinness_STILTS-UKHLS_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Thinness body mass index 351
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003126/ScoringFiles/PGS003126.txt.gz
PGS003127
(ExPRSweb_Thinness_STILTS-UKHLS_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Thinness body mass index 344,981
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003127/ScoringFiles/PGS003127.txt.gz
PGS003128
(ExPRSweb_Thinness_STILTS-UKHLS_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Thinness body mass index 1,116,425
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003128/ScoringFiles/PGS003128.txt.gz
PGS003129
(ExPRSweb_Thinness_STILTS-UKHLS_LASSOSUM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Thinness body mass index 281,336
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003129/ScoringFiles/PGS003129.txt.gz
PGS003130
(ExPRSweb_Thinness_STILTS-UKHLS_PT_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Thinness body mass index 4,280
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003130/ScoringFiles/PGS003130.txt.gz
PGS003131
(ExPRSweb_Thinness_STILTS-UKHLS_PLINK_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Thinness body mass index 5,164
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003131/ScoringFiles/PGS003131.txt.gz
PGS003132
(ExPRSweb_Thinness_STILTS-UKHLS_DBSLMM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Thinness body mass index 41,698
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003132/ScoringFiles/PGS003132.txt.gz
PGS003133
(ExPRSweb_Thinness_STILTS-UKHLS_PRSCS_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Thinness body mass index 1,117,469
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003133/ScoringFiles/PGS003133.txt.gz
PGS000286
(TM)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Thrombomodulin (TM) serum levels blood protein amount 552,241
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000286/ScoringFiles/PGS000286.txt.gz
PGS000087
(CC_Thyroid)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Thyroid cancer thyroid gland carcinoma 12
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000087/ScoringFiles/PGS000087.txt.gz
PGS000162
(cGRS_Thyroid)
 PGP000075 |
Shi Z et al. Cancer Med (2019)
 Thyroid cancer thyroid gland carcinoma 6
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000162/ScoringFiles/PGS000162.txt.gz
Showing 4351 to 4400 of 5332 rows