Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS004847
(tg_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Triglycerides triglyceride measurement 4,047,325
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004847/ScoringFiles/PGS004847.txt.gz
PGS004798
(migraine_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Migraine migraine disorder 3,984,158
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004798/ScoringFiles/PGS004798.txt.gz
PGS004725
(asthma_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Asthma asthma 3,972,232
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004725/ScoringFiles/PGS004725.txt.gz
PGS004784
(HLD_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Hypercholesterolemia Hypercholesterolemia 3,948,507
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004784/ScoringFiles/PGS004784.txt.gz
PGS004793
(ldl_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 3,946,021
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004793/ScoringFiles/PGS004793.txt.gz
PGS004770
(Hb_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Hemoglobin hemoglobin measurement 3,913,042
-
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004770/ScoringFiles/PGS004770.txt.gz
PGS004703
(a1c_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 HbA1c HbA1c measurement 3,872,159
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004703/ScoringFiles/PGS004703.txt.gz
PGS004831
(sbp_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Systolic blood pressure systolic blood pressure 3,827,774
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004831/ScoringFiles/PGS004831.txt.gz
PGS004763
(Eosinophils_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Eosinophil count eosinophil count 3,749,971
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004763/ScoringFiles/PGS004763.txt.gz
PGS004941
(CAD_MetaPRS)
 PGP000668 |
China Kadoorie Biobank Collaborative Group. et al. Nat Hum Behav (2024)
 Coronary artery disease coronary artery disease 3,711,629
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004941/ScoringFiles/PGS004941.txt.gz
PGS004738
(breast_cancer_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Breast cancer breast carcinoma 3,666,321
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004738/ScoringFiles/PGS004738.txt.gz
PGS004737
(breast_cancer_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Breast cancer breast carcinoma 3,666,245
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004737/ScoringFiles/PGS004737.txt.gz
PGS004743
(cad_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Coronary artery disease coronary artery disease 3,606,321
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004743/ScoringFiles/PGS004743.txt.gz
PGS004706
(afib_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Atrial Fibrillation atrial fibrillation 3,576,958
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004706/ScoringFiles/PGS004706.txt.gz
PGS004705
(afib_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Atrial Fibrillation atrial fibrillation 3,575,124
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004705/ScoringFiles/PGS004705.txt.gz
PGS000819
(PRS_DR)
 PGP000203 |
Forrest IS et al. Hum Mol Genet (2021)
 Diabetic retinopathy diabetic retinopathy 3,537,914
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000819/ScoringFiles/PGS000819.txt.gz
PGS004807
(Neutrophils_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Neutrophil count neutrophil count 3,498,605
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004807/ScoringFiles/PGS004807.txt.gz
PGS004230
(Impulsivity_combined)
 PGP000528 |
Deng WQ et al. Genes Brain Behav (2023)
 Impulsivity behavioural disinhibition measurement 3,465,707
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004230/ScoringFiles/PGS004230.txt.gz
PGS000748
(PRS_DE)
 PGP000152 |
Gola D et al. Circ Genom Precis Med (2020)
 Coronary artery disease coronary artery disease 3,423,987
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000748/ScoringFiles/PGS000748.txt.gz
PGS004837
(t2d_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 3,306,136
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004837/ScoringFiles/PGS004837.txt.gz
PGS002288
(PRS_POP)
 PGP000314 |
Pujol-Gualdo N et al. Nat Commun (2022)
 Pelvic organ prolapse pelvic organ prolapse 3,242,959
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002288/ScoringFiles/PGS002288.txt.gz
PGS000039
(metaGRS_ischaemicstroke)
 PGP000027 |
Abraham G et al. Nat Commun (2019)
 Ischemic stroke stroke,
Ischemic stroke		 3,225,583
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000039/ScoringFiles/PGS000039.txt.gz
PGS004781
(height_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Height body height 3,220,389
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004781/ScoringFiles/PGS004781.txt.gz
PGS004732
(Bilirubin_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total bilirubin bilirubin measurement 3,030,080
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004732/ScoringFiles/PGS004732.txt.gz
PGS004803
(Monocytes_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Monocyte count monocyte count 3,020,361
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004803/ScoringFiles/PGS004803.txt.gz
PGS001356
(AF_AnnoPred_PRS)
 PGP000252 |
Ye Y et al. Circ Genom Precis Med (2021)
 Atrial fibrillation atrial fibrillation 2,996,793
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001356/ScoringFiles/PGS001356.txt.gz
PGS001357
(T2D_AnnoPred_PRS)
 PGP000252 |
Ye Y et al. Circ Genom Precis Med (2021)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 2,996,761
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001357/ScoringFiles/PGS001357.txt.gz
PGS001355
(CAD_AnnoPred_PRS)
 PGP000252 |
Ye Y et al. Circ Genom Precis Med (2021)
 Coronary artery disease coronary artery disease 2,994,055
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001355/ScoringFiles/PGS001355.txt.gz
PGS004800
(migraine_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Migraine migraine disorder 2,968,987
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004800/ScoringFiles/PGS004800.txt.gz
PGS004756
(dbp_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Diastolic blood pressure diastolic blood pressure 2,906,802
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004756/ScoringFiles/PGS004756.txt.gz
PGS003428
(Ldpred_CC_170223)
 PGP000435 |
Koel M et al. Hum Mol Genet (2023)
 Cervical cancer cervical carcinoma 2,894,555
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003428/ScoringFiles/PGS003428.txt.gz
PGS000909
(PRS_Headaches)
 PGP000238 |
Campos AI et al. Commun Med (Lond) (2021)
 Headache Headache 2,862,172
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000909/ScoringFiles/PGS000909.txt.gz
PGS000908
(PRS_Insomnia)
 PGP000238 |
Campos AI et al. Commun Med (Lond) (2021)
 Insomnia insomnia 2,746,982
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000908/ScoringFiles/PGS000908.txt.gz
PGS004802
(Monocytes_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Monocyte count monocyte count 2,743,298
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004802/ScoringFiles/PGS004802.txt.gz
PGS004804
(Monocytes_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Monocyte count monocyte count 2,743,298
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004804/ScoringFiles/PGS004804.txt.gz
PGS004709
(Albumin_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Albumin serum albumin amount 2,659,200
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004709/ScoringFiles/PGS004709.txt.gz
PGS004748
(creatinine_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Serum creatinine serum creatinine amount 2,653,053
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004748/ScoringFiles/PGS004748.txt.gz
PGS004750
(creatinine_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Serum creatinine serum creatinine amount 2,653,053
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004750/ScoringFiles/PGS004750.txt.gz
PGS004819
(RA_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Rheumatoid Arthritis rheumatoid arthritis 2,624,228
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004819/ScoringFiles/PGS004819.txt.gz
PGS004724
(asthma_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Asthma asthma 2,342,250
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004724/ScoringFiles/PGS004724.txt.gz
PGS004726
(asthma_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Asthma asthma 2,342,250
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004726/ScoringFiles/PGS004726.txt.gz
PGS003356
(1MH_CAD_PRS_2022_Ldpred)
 PGP000409 |
Aragam KG et al. Nat Genet (2022)
 Coronary artery disease coronary artery disease 2,324,683
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003356/ScoringFiles/PGS003356.txt.gz
PGS004716
(ALT_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Alanine aminotransferase serum alanine aminotransferase measurement 2,283,693
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004716/ScoringFiles/PGS004716.txt.gz
PGS004718
(ALT_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Alanine aminotransferase serum alanine aminotransferase measurement 2,283,693
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004718/ScoringFiles/PGS004718.txt.gz
PGS004854
(VTE_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Venous thromboembolism venous thromboembolism 2,268,993
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004854/ScoringFiles/PGS004854.txt.gz
PGS004835
(stroke_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Stroke stroke 2,263,784
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004835/ScoringFiles/PGS004835.txt.gz
PGS000727
(AF_PGS)
 PGP000137 |
Ritchie SC et al. Nat Metab (2021)
 Atrial fibrillation atrial fibrillation 2,210,336
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000727/ScoringFiles/PGS000727.txt.gz
PGS000644
(PRSWEB_PHECODE202.21_C-FOLLICULAR-LYMPHOMA_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Nodular lymphoma follicular lymphoma 2,209,179
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000644/ScoringFiles/PGS000644.txt.gz
PGS004849
(Total_protein_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total protein measurement total blood protein measurement 2,167,123
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004849/ScoringFiles/PGS004849.txt.gz
PGS004760
(depression_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Depression major depressive disorder 2,141,267
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004760/ScoringFiles/PGS004760.txt.gz
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