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PGS Catalog
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Polygenic Scores (PGS)
Polygenic Scores (PGS)
Filter PGS by Participant Ancestry
Individuals included in:
Any Stage [G, D, E]
All Stages combined [G + D + E]
Development [G, D]
- GWAS [G]
- Score development [D]
PGS Evaluation [E]
G
- Source of Variant Associations (
G
WAS)
D
- Score
D
evelopment/Training
E
- PGS
E
valuation
List of ancestries includes:
--
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Display options:
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Multi-ancestry data
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name
PGS Publication ID
(PGP)
Reported Trait
Mapped Trait(s)
(Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File
(FTP Link)
PGS003176
(ExPRSweb_VitD_100021-irnt_PLINK_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Vitamin D
vitamin D measurement
19
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003176/ScoringFiles/PGS003176.txt.gz
PGS003329
(PRS19_gout)
PGP000394
|
Sumpter NA
et al.
Arthritis Rheumatol (2022)
Gout
gout
19
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003329/ScoringFiles/PGS003329.txt.gz
PGS003653
(L_hippocampal_tail_UKBB_EUR_GWAS)
PGP000464
|
Liu N
et al.
Nat Genet (2023)
Left hippocampal tail volume
hippocampal tail volume
19
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003653/ScoringFiles/PGS003653.txt.gz
PGS003742
(PRS19_PC)
PGP000470
|
Xin J
et al.
EBioMedicine (2023)
Pancreatic cancer
pancreatic neoplasm
19
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003742/ScoringFiles/PGS003742.txt.gz
PGS004250
(PRS19_pancreas)
PGP000542
|
Kim ES
et al.
NPJ Precis Oncol (2023)
Pancreatic cancer
pancreatic carcinoma
19
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004250/ScoringFiles/PGS004250.txt.gz
PGS004325
(GRS19_LC)
PGP000559
|
Wang Y
et al.
Front Physiol (2023)
Lung cancer
lung carcinoma
19
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004325/ScoringFiles/PGS004325.txt.gz
PGS000032
(GRSB)
PGP000020
|
Vassy JL
et al.
Diabetes (2014)
Type 2 diabetes (based on SNPs involved in β-cell function)
type 2 diabetes mellitus
20
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000032/ScoringFiles/PGS000032.txt.gz
PGS000425
(PRSWEB_PHECODE172.1_Melanoma-Ransohoff_P_5e-08_MGI_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Melanomas of skin (diagnosis or history)
melanoma
20
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000425/ScoringFiles/PGS000425.txt.gz
PGS000426
(PRSWEB_PHECODE172.1_Melanoma-Ransohoff_P_5e-08_UKB_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Melanomas of skin (diagnosis or history)
melanoma
20
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000426/ScoringFiles/PGS000426.txt.gz
PGS000427
(PRSWEB_PHECODE172.1_Melanoma-Ransohoff_PT_MGI_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Melanomas of skin (diagnosis or history)
melanoma
20
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000427/ScoringFiles/PGS000427.txt.gz
PGS000428
(PRSWEB_PHECODE172.1_Melanoma-Ransohoff_PT_UKB_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Melanomas of skin (diagnosis or history)
melanoma
20
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000428/ScoringFiles/PGS000428.txt.gz
PGS000480
(PRSWEB_PHECODE174.1_C50_P_5e-08_MGI_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Breast cancer (female)
breast carcinoma
20
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000480/ScoringFiles/PGS000480.txt.gz
PGS000542
(PRSWEB_PHECODE182_GWAS-Catalog-r2019-05-03-X182_PT_UKB_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Malignant neoplasm of uterus
uterine cancer
20
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000542/ScoringFiles/PGS000542.txt.gz
PGS000639
(PRSWEB_PHECODE201_GWAS-Catalog-r2019-05-03-X201_PT_MGI_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Hodgkin's disease
Hodgkins lymphoma
20
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000639/ScoringFiles/PGS000639.txt.gz
PGS000778
(PRSHCM)
PGP000182
|
Tadros R
et al.
Nat Genet (2021)
Hypertrophic cardiomyopathy
hypertrophic cardiomyopathy
20
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000778/ScoringFiles/PGS000778.txt.gz
PGS002808
(PGS20_LC)
PGP000387
|
Qin N
et al.
Lancet Oncol (2022)
Lung cancer
lung carcinoma
20
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002808/ScoringFiles/PGS002808.txt.gz
PGS004248
(PRS20_nhl)
PGP000542
|
Kim ES
et al.
NPJ Precis Oncol (2023)
Non-Hodgkin's lymphoma
non-Hodgkins lymphoma
20
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004248/ScoringFiles/PGS004248.txt.gz
PGS000053
(ALZ21_NIA-LOAD)
PGP000039
|
Tosto G
et al.
Neurology (2017)
Alzheimer's disease (late onset)
late-onset Alzheimer's disease
21
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000053/ScoringFiles/PGS000053.txt.gz
PGS000054
(ALZ21_EFIGA)
PGP000039
|
Tosto G
et al.
Neurology (2017)
Alzheimer's disease (late onset)
late-onset Alzheimer's disease
21
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000054/ScoringFiles/PGS000054.txt.gz
PGS000127
(GS-E-EUR)
PGP000064
|
Wheeler E
et al.
PLoS Med (2017)
HbA1c
HbA1c measurement
21
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000127/ScoringFiles/PGS000127.txt.gz
PGS000147
(CRC21)
PGP000070
|
Ibáñez-Sanz G
et al.
Sci Rep (2017)
Colorectal cancer
colorectal cancer
21
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000147/ScoringFiles/PGS000147.txt.gz
PGS000325
(GRS-JIA-Oli-20)
PGP000052
|
Cánovas R
et al.
Ann Rheum Dis (2020)
Oligoarthritis Juvenile Idiophatic Arthritis
oligoarticular juvenile idiopathic arthritis
21
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000325/ScoringFiles/PGS000325.txt.gz
PGS000389
(PRSWEB_PHECODE165.1_GWAS-Catalog-r2019-05-03-X165.1_P_5e-08_MGI_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Lung and bronchus cancer
tracheal cancer
,
bronchus cancer
,
lung cancer
21
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000389/ScoringFiles/PGS000389.txt.gz
PGS000390
(PRSWEB_PHECODE165.1_GWAS-Catalog-r2019-05-03-X165.1_P_5e-08_UKB_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Lung and bronchus cancer
tracheal cancer
,
bronchus cancer
,
lung cancer
21
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000390/ScoringFiles/PGS000390.txt.gz
PGS000414
(PRSWEB_PHECODE172.1_C3-MELANOMA-SKIN_PT_MGI_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Melanomas of skin (diagnosis or history)
melanoma
21
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000414/ScoringFiles/PGS000414.txt.gz
PGS000544
(PRSWEB_PHECODE184.11_GWAS-Catalog-r2019-05-03-X184.11_P_5e-08_UKB_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Malignant neoplasm of ovary
ovarian neoplasm
21
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000544/ScoringFiles/PGS000544.txt.gz
PGS000545
(PRSWEB_PHECODE184.11_GWAS-Catalog-r2019-05-03-X184.11_PT_UKB_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Malignant neoplasm of ovary
ovarian neoplasm
21
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000545/ScoringFiles/PGS000545.txt.gz
PGS000559
(PRSWEB_PHECODE184.11_Phelan-SIOC_P_5e-08_MGI_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Malignant neoplasm of ovary
ovarian neoplasm
21
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000559/ScoringFiles/PGS000559.txt.gz
PGS000560
(PRSWEB_PHECODE184.11_Phelan-SIOC_P_5e-08_UKB_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Malignant neoplasm of ovary
ovarian neoplasm
21
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000560/ScoringFiles/PGS000560.txt.gz
PGS000565
(PRSWEB_PHECODE185_20001-1044_P_5e-08_MGI_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Prostate cancer
prostate carcinoma
21
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000565/ScoringFiles/PGS000565.txt.gz
PGS000654
(PRSWEB_PHECODE204.4_GWAS-Catalog-r2019-05-03-X204.4_PT_UKB_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Multiple myeloma
multiple myeloma
21
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000654/ScoringFiles/PGS000654.txt.gz
PGS000853
(T2D_Insulin_Secretion_2)
PGP000211
|
Aly DM
et al.
Nat Genet (2021)
Type 2 diabetes (based on SNPs associated with insulin secretion)
type 2 diabetes mellitus
21
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000853/ScoringFiles/PGS000853.txt.gz
PGS001097
(GBE_BIN_FC6001747)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Hair color, other
hair colour measurement
21
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001097/ScoringFiles/PGS001097.txt.gz
PGS001779
(BRSprs)
PGP000260
|
Barc J
et al.
Nat Genet (2022)
Brugada syndrome
Brugada syndrome
21
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001779/ScoringFiles/PGS001779.txt.gz
PGS002577
(repro_NumberChildrenEverBorn_Pooled.P+T.5e-08)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Number of children ever born
number of children ever born measurement
21
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002577/ScoringFiles/PGS002577.txt.gz
PGS003449
(PRS21_HL)
PGP000448
|
Berndt SI
et al.
Leukemia (2022)
Hodgkin lymphoma
Hodgkins lymphoma
21
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003449/ScoringFiles/PGS003449.txt.gz
PGS003574
(GRS_Dementia21)
PGP000459
|
Mukadam N
et al.
PLoS One (2022)
Alzheimer's disease (late onset)
Alzheimer disease
21
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003574/ScoringFiles/PGS003574.txt.gz
PGS004165
(PRS21_LC)
PGP000518
|
Wei X
et al.
Int J Cancer (2023)
Lung cancer
lung carcinoma
21
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004165/ScoringFiles/PGS004165.txt.gz
PGS000083
(CC_Pancreas)
PGP000050
|
Graff RE
et al.
Nat Commun (2021)
Pancreatic cancer
pancreatic carcinoma
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000083/ScoringFiles/PGS000083.txt.gz
PGS000128
(GS-E-AFR)
PGP000064
|
Wheeler E
et al.
PLoS Med (2017)
HbA1c
HbA1c measurement
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000128/ScoringFiles/PGS000128.txt.gz
PGS000334
(GRSfull_22)
PGP000101
|
Zhang Q
et al.
Nat Commun (2020)
Late-onset Alzheimer’s disease
late-onset Alzheimer's disease
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000334/ScoringFiles/PGS000334.txt.gz
PGS000339
(PRS22_CM)
PGP000106
|
Law MH
et al.
Hum Mol Genet (2020)
Cutaneous melanoma
cutaneous melanoma
22
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000339/ScoringFiles/PGS000339.txt.gz
PGS000352
(PRS_HGS)
PGP000117
|
Barnes DR
et al.
Genet Med (2020)
High grade serous ovarian cancer
high grade ovarian serous adenocarcinoma
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000352/ScoringFiles/PGS000352.txt.gz
PGS000472
(PRSWEB_PHECODE174.1_20001-1002_P_5e-08_MGI_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Breast cancer (female)
breast carcinoma
22
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000472/ScoringFiles/PGS000472.txt.gz
PGS000603
(PRSWEB_PHECODE187.2_GWAS-Catalog-r2019-05-03-X187.2_PT_MGI_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Malignant neoplasm of testis
testicular carcinoma
22
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000603/ScoringFiles/PGS000603.txt.gz
PGS000653
(PRSWEB_PHECODE204.4_GWAS-Catalog-r2019-05-03-X204.4_P_5e-08_UKB_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Multiple myeloma
multiple myeloma
22
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000653/ScoringFiles/PGS000653.txt.gz
PGS000663
(wGRS22)
PGP000123
|
Kim J
et al.
Cancer Epidemiol Biomarkers Prev (2020)
Pancreatic cancer
pancreatic carcinoma
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000663/ScoringFiles/PGS000663.txt.gz
PGS000725
(PRS_Pancreas)
PGP000135
|
Jia G
et al.
JNCI Cancer Spectr (2020)
Pancreatic cancer
pancreatic carcinoma
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000725/ScoringFiles/PGS000725.txt.gz
PGS000794
(CC_Pancreas_IV)
PGP000186
|
Kachuri L
et al.
Nat Commun (2020)
Pancreatic cancer
pancreatic carcinoma
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000794/ScoringFiles/PGS000794.txt.gz
PGS000799
(GRSw_TAGC)
PGP000189
|
Dijk FN
et al.
J Allergy Clin Immunol (2019)
Asthma
asthma
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000799/ScoringFiles/PGS000799.txt.gz
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