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PGS Catalog
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Polygenic Scores (PGS)
Polygenic Scores (PGS)
Filter PGS by Participant Ancestry
Individuals included in:
Any Stage [G, D, E]
All Stages combined [G + D + E]
Development [G, D]
- GWAS [G]
- Score development [D]
PGS Evaluation [E]
G
- Source of Variant Associations (
G
WAS)
D
- Score
D
evelopment/Training
E
- PGS
E
valuation
List of ancestries includes:
--
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Display options:
Show European ancestry data
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only
Multi-ancestry data
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name
PGS Publication ID
(PGP)
Reported Trait
Mapped Trait(s)
(Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File
(FTP Link)
PGS000729
(T2D_PGS)
PGP000137
|
Ritchie SC
et al.
Nat Metab (2021)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
2,017,388
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000729/ScoringFiles/PGS000729.txt.gz
PGS000804
(GRS582_T2Dmulti)
PGP000193
|
Polfus LM
et al.
HGG Adv (2021)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
582
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000804/ScoringFiles/PGS000804.txt.gz
- Check
Terms/Licenses
PGS000805
(GRS582_T2Deur)
PGP000193
|
Polfus LM
et al.
HGG Adv (2021)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
582
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000805/ScoringFiles/PGS000805.txt.gz
- Check
Terms/Licenses
PGS000806
(GRS582_T2Dafr)
PGP000193
|
Polfus LM
et al.
HGG Adv (2021)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
582
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000806/ScoringFiles/PGS000806.txt.gz
- Check
Terms/Licenses
PGS000807
(GRS582_T2Dasn)
PGP000193
|
Polfus LM
et al.
HGG Adv (2021)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
582
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000807/ScoringFiles/PGS000807.txt.gz
- Check
Terms/Licenses
PGS000808
(GRS582_T2Dhis)
PGP000193
|
Polfus LM
et al.
HGG Adv (2021)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
582
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000808/ScoringFiles/PGS000808.txt.gz
- Check
Terms/Licenses
PGS000832
(T2D-GRS)
PGP000211
|
Aly DM
et al.
Nat Genet (2021)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
384
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000832/ScoringFiles/PGS000832.txt.gz
PGS000864
(T2D-gPRS)
PGP000211
|
Aly DM
et al.
Nat Genet (2021)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
389,243
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000864/ScoringFiles/PGS000864.txt.gz
PGS000868
(T2D_221)
PGP000214
|
Aksit MA
et al.
J Clin Endocrinol Metab (2020)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
221
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000868/ScoringFiles/PGS000868.txt.gz
PGS001295
(GBE_HC165)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
385
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001295/ScoringFiles/PGS001295.txt.gz
PGS001357
(T2D_AnnoPred_PRS)
PGP000252
|
Ye Y
et al.
Circ Genom Precis Med (2021)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
2,996,761
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001357/ScoringFiles/PGS001357.txt.gz
PGS001781
(T2D_PRSCS)
PGP000261
|
Tamlander M
et al.
Commun Biol (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
1,091,673
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001781/ScoringFiles/PGS001781.txt.gz
PGS001818
(portability-PLR_250.2)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
30,745
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001818/ScoringFiles/PGS001818.txt.gz
PGS002026
(portability-ldpred2_250.2)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
830,783
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002026/ScoringFiles/PGS002026.txt.gz
PGS002243
(ldpred_t2d)
PGP000271
|
Mars N
et al.
Cell Genom (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
6,431,973
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002243/ScoringFiles/PGS002243.txt.gz
PGS002308
(PRScsx_T2D)
PGP000331
|
Ge T
et al.
Genome Med (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
1,259,754
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002308/ScoringFiles/PGS002308.txt.gz
PGS002354
(disease_T2D.BOLT-LMM)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
1,109,311
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002354/ScoringFiles/PGS002354.txt.gz
PGS002379
(disease_T2D.BOLT-LMM-BBJ)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
920,930
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002379/ScoringFiles/PGS002379.txt.gz
PGS002426
(disease_T2D.P+T.0.0001)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
3,947
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002426/ScoringFiles/PGS002426.txt.gz
PGS002475
(disease_T2D.P+T.0.001)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
16,275
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002475/ScoringFiles/PGS002475.txt.gz
PGS002524
(disease_T2D.P+T.0.01)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
95,287
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002524/ScoringFiles/PGS002524.txt.gz
PGS002573
(disease_T2D.P+T.1e-06)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
673
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002573/ScoringFiles/PGS002573.txt.gz
PGS002622
(disease_T2D.P+T.5e-08)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
293
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002622/ScoringFiles/PGS002622.txt.gz
PGS002671
(disease_T2D.PolyFun-pred)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
258,382
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002671/ScoringFiles/PGS002671.txt.gz
PGS002720
(disease_T2D.SBayesR)
PGP000332
|
Weissbrod O
et al.
Nat Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
911,809
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002720/ScoringFiles/PGS002720.txt.gz
PGS002733
(GRS17_T2D)
PGP000342
|
Pezzilli S
et al.
Diabetes Metab (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
17
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002733/ScoringFiles/PGS002733.txt.gz
PGS002771
(Type_2_diabetes_prscs)
PGP000364
|
Mars N
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
1,091,608
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002771/ScoringFiles/PGS002771.txt.gz
PGS003089
(ExPRSweb_T2D_2443_LASSOSUM_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
488,969
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003089/ScoringFiles/PGS003089.txt.gz
PGS003090
(ExPRSweb_T2D_2443_PT_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
1,888
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003090/ScoringFiles/PGS003090.txt.gz
PGS003091
(ExPRSweb_T2D_2443_PLINK_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
2,707
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003091/ScoringFiles/PGS003091.txt.gz
PGS003092
(ExPRSweb_T2D_2443_DBSLMM_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
10,304,000
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003092/ScoringFiles/PGS003092.txt.gz
PGS003093
(ExPRSweb_T2D_2443_PRSCS_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
1,113,832
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003093/ScoringFiles/PGS003093.txt.gz
PGS003094
(ExPRSweb_T2D_29358691-GCST005413_LASSOSUM_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
266,890
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003094/ScoringFiles/PGS003094.txt.gz
PGS003095
(ExPRSweb_T2D_29358691-GCST005413_PT_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
45
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003095/ScoringFiles/PGS003095.txt.gz
PGS003096
(ExPRSweb_T2D_29358691-GCST005413_PLINK_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
46
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003096/ScoringFiles/PGS003096.txt.gz
PGS003097
(ExPRSweb_T2D_29358691-GCST005413_DBSLMM_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
229
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003097/ScoringFiles/PGS003097.txt.gz
PGS003098
(ExPRSweb_T2D_29358691-GCST005413_PRSCS_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
1,116,101
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003098/ScoringFiles/PGS003098.txt.gz
PGS003099
(ExPRSweb_T2D_30054458-GCST006867_LASSOSUM_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
555,512
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003099/ScoringFiles/PGS003099.txt.gz
PGS003100
(ExPRSweb_T2D_30054458-GCST006867_PT_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
5,693
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003100/ScoringFiles/PGS003100.txt.gz
PGS003101
(ExPRSweb_T2D_30054458-GCST006867_PLINK_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
5,693
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003101/ScoringFiles/PGS003101.txt.gz
PGS003102
(ExPRSweb_T2D_30054458-GCST006867_DBSLMM_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
5,052,574
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003102/ScoringFiles/PGS003102.txt.gz
PGS003103
(ExPRSweb_T2D_30054458-GCST006867_PRSCS_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
945,820
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003103/ScoringFiles/PGS003103.txt.gz
PGS003104
(ExPRSweb_T2D_METAANALYSIS-DIAGRAM_LASSOSUM_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
374,510
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003104/ScoringFiles/PGS003104.txt.gz
PGS003105
(ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PT_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
187
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003105/ScoringFiles/PGS003105.txt.gz
PGS003106
(ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PLINK_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
187
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003106/ScoringFiles/PGS003106.txt.gz
PGS003107
(ExPRSweb_T2D_METAANALYSIS-DIAGRAM_DBSLMM_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
995
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003107/ScoringFiles/PGS003107.txt.gz
PGS003108
(ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PRSCS_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
1,118,480
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003108/ScoringFiles/PGS003108.txt.gz
PGS003109
(ExPRSweb_T2D_29358691-GCST005413_LASSOSUM_UKB_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
311,565
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003109/ScoringFiles/PGS003109.txt.gz
PGS003110
(ExPRSweb_T2D_29358691-GCST005413_PT_UKB_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
118
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003110/ScoringFiles/PGS003110.txt.gz
PGS003111
(ExPRSweb_T2D_29358691-GCST005413_PLINK_UKB_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
143
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003111/ScoringFiles/PGS003111.txt.gz
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