Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS004926
(Back_3000)
 PGP000661 |
Tsepilov YA et al. J Pers Med (2023)
 Chronic back pain Back pain 1,090,574
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004926/ScoringFiles/PGS004926.txt.gz
PGS004927
(score_resint_max_aa_shortaxis_cm)
 PGP000663 |
Pirruccello JP et al. Eur Heart J (2024)
 Ascending aortic diameter aortic measurement 1,111,632
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004927/ScoringFiles/PGS004927.txt.gz
PGS004929
(AF_Ldpred2_combined)
 PGP000665 |
Moreno-Grau S et al. Human Genomics (2024)
 Atrial fibrillation atrial fibrillation 178,814
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004929/ScoringFiles/PGS004929.txt.gz
PGS004930
(celiac_disease_snpnet_combined)
 PGP000665 |
Moreno-Grau S et al. Human Genomics (2024)
 Celiac disease celiac disease 463
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004930/ScoringFiles/PGS004930.txt.gz
PGS004931
(gout_snpnet_combined)
 PGP000665 |
Moreno-Grau S et al. Human Genomics (2024)
 Gout gout 1,138
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004931/ScoringFiles/PGS004931.txt.gz
PGS004932
(high_density_lipoprotein_cholesterol_measurement_combined)
 PGP000665 |
Moreno-Grau S et al. Human Genomics (2024)
 HDL cholesterol high density lipoprotein cholesterol measurement 17,151
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004932/ScoringFiles/PGS004932.txt.gz
PGS004933
(hemorrhoid_LDpred2_combined)
 PGP000665 |
Moreno-Grau S et al. Human Genomics (2024)
 Hemorrhoid hemorrhoid 184,519
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004933/ScoringFiles/PGS004933.txt.gz
PGS004934
(hypertension_snpnet_combined)
 PGP000665 |
Moreno-Grau S et al. Human Genomics (2024)
 Hypertension hypertension 15,056
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004934/ScoringFiles/PGS004934.txt.gz
PGS004935
(hypothyroidism_snpnet_combined)
 PGP000665 |
Moreno-Grau S et al. Human Genomics (2024)
 Hypothyroidism hypothyroidism 6,127
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004935/ScoringFiles/PGS004935.txt.gz
PGS004936
(low_density_lipoprotein_cholesterol_measurement_combined)
 PGP000665 |
Moreno-Grau S et al. Human Genomics (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 139,875
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004936/ScoringFiles/PGS004936.txt.gz
PGS004937
(triglyceride_measurement_combined)
 PGP000665 |
Moreno-Grau S et al. Human Genomics (2024)
 Triglycerides triglyceride measurement 8,337
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004937/ScoringFiles/PGS004937.txt.gz
PGS004938
(pgs_data_ldpred)
 PGP000666 |
Kovalenko E et al. Front Med (Lausanne) (2024)
 Severe COVID-19 course COVID-19 955,503
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004938/ScoringFiles/PGS004938.txt.gz
PGS004941
(CAD_MetaPRS)
 PGP000668 |
China Kadoorie Biobank Collaborative Group. et al. Nat Hum Behav (2024)
 Coronary artery disease coronary artery disease 3,711,629
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004941/ScoringFiles/PGS004941.txt.gz
PGS004942
(IS_MetaPRS)
 PGP000668 |
China Kadoorie Biobank Collaborative Group. et al. Nat Hum Behav (2024)
 Ischemic stroke Ischemic stroke 4,765,243
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004942/ScoringFiles/PGS004942.txt.gz
PGS004943
(ICH_MetaPRS)
 PGP000668 |
China Kadoorie Biobank Collaborative Group. et al. Nat Hum Behav (2024)
 Intracerebral hemorrhage intracerebral hemorrhage 2,124,631
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004943/ScoringFiles/PGS004943.txt.gz
PGS004944
(lassosum_weights_POAG_CROSS_EUR)
 PGP000670 |
Sekimitsu S et al. JAMA Ophthalmol (2023)
 Primary open-angle glaucoma open-angle glaucoma 110,772
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004944/ScoringFiles/PGS004944.txt.gz
PGS004945
(PRS87_CRC)
 PGP000671 |
Gao P et al. Int J Cancer (2023)
 Colorectal cancer colorectal cancer 87
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004945/ScoringFiles/PGS004945.txt.gz
PGS004952
(PRS52_AMD)
 PGP000673 |
Herold JM et al. Invest Ophthalmol Vis Sci (2023)
 Age-related macular degeneration age-related macular degeneration 52
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004952/ScoringFiles/PGS004952.txt.gz
PGS004953
(PRS21_melanoma)
 PGP000675 |
Pandeya N et al. Br J Dermatol (2023)
 Melanoma melanoma 21
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004953/ScoringFiles/PGS004953.txt.gz
PGS004954
(PRS26_TC)
 PGP000676 |
Pozdeyev N et al. J Clin Endocrinol Metab (2024)
 Thyroid cancer thyroid carcinoma 26
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004954/ScoringFiles/PGS004954.txt.gz
PGS004955
(PRS23)
 PGP000678 |
Zhu M et al. Int J Epidemiol (2023)
 Lung cancer lung carcinoma 23
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004955/ScoringFiles/PGS004955.txt.gz
PGS004956
(Hemoglobin_Mean_INT_ldpred_AFRss_afrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Hemoglobin hemoglobin measurement 1,286,612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004956/ScoringFiles/PGS004956.txt.gz
PGS004957
(Hemoglobin_Mean_INT_ldpred_EURss_eurld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Hemoglobin hemoglobin measurement 1,286,612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004957/ScoringFiles/PGS004957.txt.gz
PGS004958
(Hemoglobin_Mean_INT_ldpred_HISss_amrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Hemoglobin hemoglobin measurement 1,286,612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004958/ScoringFiles/PGS004958.txt.gz
PGS004959
(Hemoglobin_Mean_INT_ldpred_METAss_afrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Hemoglobin hemoglobin measurement 1,286,612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004959/ScoringFiles/PGS004959.txt.gz
PGS004960
(Hemoglobin_Mean_INT_ldpred_METAss_amrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Hemoglobin hemoglobin measurement 1,286,612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004960/ScoringFiles/PGS004960.txt.gz
PGS004961
(Hemoglobin_Mean_INT_ldpred_METAss_eurld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Hemoglobin hemoglobin measurement 1,286,612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004961/ScoringFiles/PGS004961.txt.gz
PGS004962
(Hemoglobin_Mean_INT_prscs_AFRss_afrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Hemoglobin hemoglobin measurement 1,273,252
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004962/ScoringFiles/PGS004962.txt.gz
PGS004963
(Hemoglobin_Mean_INT_prscs_EURss_eurld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Hemoglobin hemoglobin measurement 1,273,252
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004963/ScoringFiles/PGS004963.txt.gz
PGS004964
(Hemoglobin_Mean_INT_prscs_HISss_amrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Hemoglobin hemoglobin measurement 1,273,252
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004964/ScoringFiles/PGS004964.txt.gz
PGS004965
(Hemoglobin_Mean_INT_prscs_METAss_afrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Hemoglobin hemoglobin measurement 1,273,252
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004965/ScoringFiles/PGS004965.txt.gz
PGS004966
(Hemoglobin_Mean_INT_prscs_METAss_amrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Hemoglobin hemoglobin measurement 1,273,252
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004966/ScoringFiles/PGS004966.txt.gz
PGS004967
(Hemoglobin_Mean_INT_prscs_METAss_eurld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Hemoglobin hemoglobin measurement 1,273,252
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004967/ScoringFiles/PGS004967.txt.gz
PGS004968
(Hemoglobin_Mean_INT_prscsx_METAweight)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Hemoglobin hemoglobin measurement 1,277,825
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004968/ScoringFiles/PGS004968.txt.gz
PGS004969
(LDLC_Mean_INT_ldpred_AFRss_afrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,286,612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004969/ScoringFiles/PGS004969.txt.gz
PGS004970
(LDLC_Mean_INT_ldpred_EURss_eurld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,286,612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004970/ScoringFiles/PGS004970.txt.gz
PGS004971
(LDLC_Mean_INT_ldpred_HISss_amrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,286,612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004971/ScoringFiles/PGS004971.txt.gz
PGS004972
(LDLC_Mean_INT_ldpred_METAss_afrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,286,612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004972/ScoringFiles/PGS004972.txt.gz
PGS004973
(LDLC_Mean_INT_ldpred_METAss_amrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,286,612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004973/ScoringFiles/PGS004973.txt.gz
PGS004974
(LDLC_Mean_INT_ldpred_METAss_eurld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,286,612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004974/ScoringFiles/PGS004974.txt.gz
PGS004975
(LDLC_Mean_INT_prscs_AFRss_afrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,273,897
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004975/ScoringFiles/PGS004975.txt.gz
PGS004976
(LDLC_Mean_INT_prscs_EURss_eurld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,273,897
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004976/ScoringFiles/PGS004976.txt.gz
PGS004977
(LDLC_Mean_INT_prscs_HISss_amrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,273,897
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004977/ScoringFiles/PGS004977.txt.gz
PGS004978
(LDLC_Mean_INT_prscs_METAss_afrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,273,897
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004978/ScoringFiles/PGS004978.txt.gz
PGS004979
(LDLC_Mean_INT_prscs_METAss_amrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,273,897
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004979/ScoringFiles/PGS004979.txt.gz
PGS004980
(LDLC_Mean_INT_prscs_METAss_eurld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,273,897
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004980/ScoringFiles/PGS004980.txt.gz
PGS004981
(LDLC_Mean_INT_prscsx_METAweight)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,277,825
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004981/ScoringFiles/PGS004981.txt.gz
PGS004982
(mean_BMI_INT_ldpred_AFRss_afrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Body mass index (BMI) body mass index 1,286,612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004982/ScoringFiles/PGS004982.txt.gz
PGS004983
(mean_BMI_INT_ldpred_EURss_eurld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Body mass index (BMI) body mass index 1,286,612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004983/ScoringFiles/PGS004983.txt.gz
PGS004984
(mean_BMI_INT_ldpred_HISss_amrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Body mass index (BMI) body mass index 1,286,612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004984/ScoringFiles/PGS004984.txt.gz
Showing 4851 to 4900 of 5001 rows