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PGS Catalog
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Polygenic Scores (PGS)
Polygenic Scores (PGS)
Filter PGS by Participant Ancestry
Individuals included in:
Any Stage [G, D, E]
All Stages combined [G + D + E]
Development [G, D]
- GWAS [G]
- Score development [D]
PGS Evaluation [E]
G
- Source of Variant Associations (
G
WAS)
D
- Score
D
evelopment/Training
E
- PGS
E
valuation
List of ancestries includes:
--
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Display options:
Show European ancestry data
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Multi-ancestry data
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name
PGS Publication ID
(PGP)
Reported Trait
Mapped Trait(s)
(Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File
(FTP Link)
PGS004318
(PRS29_dementia)
PGP000548
|
Feng J
et al.
BMC Geriatr (2023)
Dementia
dementia
29
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004318/ScoringFiles/PGS004318.txt.gz
PGS004896
(mAlb)
PGP000623
|
Cañadas-Garre M
et al.
Int J Mol Sci (2023)
Microalbuminuria
Moderate albuminuria
29
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004896/ScoringFiles/PGS004896.txt.gz
PGS000154
(cGRS_Colorectal)
PGP000075
|
Shi Z
et al.
Cancer Med (2019)
Colorectal cancer
colorectal cancer
30
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000154/ScoringFiles/PGS000154.txt.gz
PGS000351
(PRS_EOC)
PGP000117
|
Barnes DR
et al.
Genet Med (2020)
Invasive epithelial ovarian cancer
ovarian carcinoma
30
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000351/ScoringFiles/PGS000351.txt.gz
PGS000456
(PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-08_MGI_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Basal cell carcinoma
basal cell carcinoma
30
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000456/ScoringFiles/PGS000456.txt.gz
PGS000457
(PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-08_UKB_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Basal cell carcinoma
basal cell carcinoma
30
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000457/ScoringFiles/PGS000457.txt.gz
PGS000862
(DR)
PGP000211
|
Aly DM
et al.
Nat Genet (2021)
Diabetic Retinopathy
diabetic retinopathy
30
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000862/ScoringFiles/PGS000862.txt.gz
PGS001136
(GBE_HC413)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Hematologic disease, genetic
hematologic disease
30
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001136/ScoringFiles/PGS001136.txt.gz
PGS001868
(portability-PLR_654.2)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Rhesus isoimmunization in pregnancy
Rh isoimmunization
30
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001868/ScoringFiles/PGS001868.txt.gz
PGS004255
(GenoBoost_rheumatoid_arthritis_0)
PGP000546
|
Ohta R
et al.
Nat Commun (2024)
Rheumatoid arthritis
rheumatoid arthritis
30
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004255/ScoringFiles/PGS004255.txt.gz
PGS004280
(GenoBoost_all-cause_dementia_0)
PGP000546
|
Ohta R
et al.
Nat Commun (2024)
All-cause dementia
dementia
30
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004280/ScoringFiles/PGS004280.txt.gz
PGS004287
(GenoBoost_alzheimer_s_disease_2)
PGP000546
|
Ohta R
et al.
Nat Commun (2024)
Alzheimer's disease
Alzheimer disease
30
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004287/ScoringFiles/PGS004287.txt.gz
PGS004322
(GRS30_IS)
PGP000555
|
McElligott B
et al.
Front Cardiovasc Med (2023)
Ischemic stroke
stroke
,
Ischemic stroke
30
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004322/ScoringFiles/PGS004322.txt.gz
PGS005115
(PGS_T2D_beta_cell)
PGP000701
|
Loesch DP
et al.
medRxiv (2024)
|
Pre
Type 2 diabetes (T2D)
type 2 diabetes mellitus
30
-
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005115/ScoringFiles/PGS005115.txt.gz
PGS000197
(G-PROB_SpA)
PGP000081
|
Knevel R
et al.
Sci Transl Med (2020)
Spondyloarthroparthy
spondyloarthropathy
31
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000197/ScoringFiles/PGS000197.txt.gz
PGS000198
(G-PROB_PsA)
PGP000081
|
Knevel R
et al.
Sci Transl Med (2020)
Psoriatic arthritis
psoriatic arthritis
31
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000198/ScoringFiles/PGS000198.txt.gz
PGS000305
(GRS31_FG)
PGP000092
|
Xie T
et al.
Circ Genom Precis Med (2020)
Fasting glucose
fasting blood glucose measurement
31
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000305/ScoringFiles/PGS000305.txt.gz
PGS000573
(PRSWEB_PHECODE185_C61_P_5e-08_MGI_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Prostate cancer
prostate carcinoma
31
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000573/ScoringFiles/PGS000573.txt.gz
PGS000599
(PRSWEB_PHECODE187.2_C3-TESTIS_PT_MGI_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Malignant neoplasm of testis
testicular carcinoma
31
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000599/ScoringFiles/PGS000599.txt.gz
PGS000724
(PRS_Ovary)
PGP000135
|
Jia G
et al.
JNCI Cancer Spectr (2020)
Epithelial ovarian cancer
ovarian carcinoma
31
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000724/ScoringFiles/PGS000724.txt.gz
PGS000744
(PRS_melanoma_pigment.pathway)
PGP000151
|
Cust AE
et al.
J Invest Dermatol (2018)
Melanoma
melanoma
31
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000744/ScoringFiles/PGS000744.txt.gz
PGS000876
(PRS31_AD)
PGP000222
|
Leonenko G
et al.
Ann Clin Transl Neurol (2019)
Alzheimer's disease
Alzheimer disease
31
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000876/ScoringFiles/PGS000876.txt.gz
PGS004907
(PRS31_FT4)
PGP000639
|
Mulder TA
et al.
Eur J Endocrinol (2023)
Free thyroxine concentration
thyroxine measurement
31
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004907/ScoringFiles/PGS004907.txt.gz
PGS000063
(GRS_TG)
PGP000045
|
Johnson L
et al.
PLoS One (2015)
Triglycerides
triglyceride measurement
32
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000063/ScoringFiles/PGS000063.txt.gz
PGS000119
(BCC32)
PGP000055
|
Fritsche LG
et al.
PLoS Genet (2019)
Basal cell carcinoma
basal cell carcinoma
32
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000119/ScoringFiles/PGS000119.txt.gz
PGS000476
(PRSWEB_PHECODE174.1_C3-BREAST-3_P_5e-08_MGI_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Breast cancer (female)
breast carcinoma
32
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000476/ScoringFiles/PGS000476.txt.gz
PGS000646
(PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_P_5e-08_MGI_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Chronic lymphocytic leukemia
chronic lymphocytic leukemia
32
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000646/ScoringFiles/PGS000646.txt.gz
PGS000647
(PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_P_5e-08_UKB_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Chronic lymphocytic leukemia
chronic lymphocytic leukemia
32
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000647/ScoringFiles/PGS000647.txt.gz
PGS000665
(GRS_32)
PGP000125
|
Marston NA
et al.
Circulation (2020)
Ischemic stroke
stroke
,
Ischemic stroke
32
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000665/ScoringFiles/PGS000665.txt.gz
PGS000756
(GRS3_Nar)
PGP000162
|
Ouyang H
et al.
Ann Transl Med (2020)
Narcolepsy
narcolepsy-cataplexy syndrome
32
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000756/ScoringFiles/PGS000756.txt.gz
PGS003830
(TC_SAS_CT)
PGP000489
|
Zhang H
et al.
Nat Genet (2023)
Total cholesterol
total cholesterol measurement
32
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003830/ScoringFiles/PGS003830.txt.gz
PGS004597
(PRS32_IS)
PGP000576
|
Peng H
et al.
Nutrients (2023)
Ischemic stroke
stroke
,
Ischemic stroke
32
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004597/ScoringFiles/PGS004597.txt.gz
PGS000021
(GRS1)
PGP000011
|
Oram RA
et al.
Diabetes Care (2015)
Type 1 diabetes (T1D)
type 1 diabetes mellitus
33
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000021/ScoringFiles/PGS000021.txt.gz
PGS000026
(PHS)
PGP000016
|
Desikan RS
et al.
PLoS Med (2017)
Alzheimer's disease
Alzheimer disease
33
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000026/ScoringFiles/PGS000026.txt.gz
PGS000122
(2018_BMD33_GRS.FN)
PGP000056
|
Ho-Le TP
et al.
J Bone Miner Res (2016)
Bone mineral density (BMD)
bone density
33
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000122/ScoringFiles/PGS000122.txt.gz
PGS000341
(GRS33_SSc)
PGP000110
|
Bossini-Castillo L
et al.
Ann Rheum Dis (2020)
Systemic sclerosis
systemic scleroderma
33
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000341/ScoringFiles/PGS000341.txt.gz
PGS001827
(portability-PLR_290.1)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Dementia
dementia
33
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001827/ScoringFiles/PGS001827.txt.gz
PGS002270
(PRS33_LC)
PGP000300
|
Zhang P
et al.
Br J Cancer (2022)
Lung cancer
lung carcinoma
33
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002270/ScoringFiles/PGS002270.txt.gz
PGS002307
(PRS33_gout)
PGP000329
|
Zhang Y
et al.
BMC Med (2022)
Gout
gout
33
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002307/ScoringFiles/PGS002307.txt.gz
PGS000859
(CKD)
PGP000211
|
Aly DM
et al.
Nat Genet (2021)
Chronic kidney disease
chronic kidney disease
34
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000859/ScoringFiles/PGS000859.txt.gz
PGS002730
(GRSlipid_35)
PGP000337
|
Mayerhofer E
et al.
Brain (2022)
LDL lowering in response to statin
low density lipoprotein cholesterol measurement
,
response to statin
35
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002730/ScoringFiles/PGS002730.txt.gz
PGS004106
(pt_clump.auto.GCST004773.T2D)
PGP000517
|
Monti R
et al.
Am J Hum Genet (2024)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
35
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004106/ScoringFiles/PGS004106.txt.gz
PGS004238
(wGRS35)
PGP000535
|
Cheng CF
et al.
J Gene Med (2021)
Cardiovascular disease
cardiovascular disease
35
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004238/ScoringFiles/PGS004238.txt.gz
PGS000082
(CC_Ovary)
PGP000050
|
Graff RE
et al.
Nat Commun (2021)
Ovarian cancer
ovarian carcinoma
36
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000082/ScoringFiles/PGS000082.txt.gz
PGS000793
(CC_Ovary_IV)
PGP000186
|
Kachuri L
et al.
Nat Commun (2020)
Ovarian cancer
ovarian carcinoma
36
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000793/ScoringFiles/PGS000793.txt.gz
PGS000875
(PGS36_LDLc)
PGP000221
|
Leal LG
et al.
Mol Genet Genomic Med (2020)
LDL cholesterol
low density lipoprotein cholesterol measurement
36
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000875/ScoringFiles/PGS000875.txt.gz
PGS001025
(GBE_HC951)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Nonrheumatic aortic valve disorders (time-to-event)
aortic valve disease
36
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001025/ScoringFiles/PGS001025.txt.gz
PGS001271
(GBE_HC810)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Multiple sclerosis (time-to-event)
multiple sclerosis
36
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001271/ScoringFiles/PGS001271.txt.gz
PGS001287
(GBE_HC91)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Psoriatic arthropathy
psoriatic arthritis
36
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001287/ScoringFiles/PGS001287.txt.gz
PGS002235
(elasticnet_VTE)
PGP000267
|
Kolin DA
et al.
Sci Rep (2021)
Venous thromboembolism
venous thromboembolism
36
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002235/ScoringFiles/PGS002235.txt.gz
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