Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS001192
(GBE_HC1222)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Gonarthrosis [arthrosis of knee] (time-to-event) osteoarthritis, knee 4,525
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001192/ScoringFiles/PGS001192.txt.gz
PGS001199
(GBE_INI30120)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Lymphocyte count lymphocyte count 4,212
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001199/ScoringFiles/PGS001199.txt.gz
PGS001200
(GBE_INI30100)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean platelet volume platelet volume 24,114
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001200/ScoringFiles/PGS001200.txt.gz
PGS001218
(GBE_INI30060)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean corpuscular hemoglobin concentration mean corpuscular hemoglobin concentration 2,359
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001218/ScoringFiles/PGS001218.txt.gz
PGS001219
(GBE_INI30050)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean corpuscular hemoglobin mean corpuscular hemoglobin 13,003
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001219/ScoringFiles/PGS001219.txt.gz
PGS001220
(GBE_INI30040)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean corpuscular volume erythrocyte volume 17,311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001220/ScoringFiles/PGS001220.txt.gz
PGS001225
(GBE_INI30030)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Percentage of hematocrit hematocrit 15,721
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001225/ScoringFiles/PGS001225.txt.gz
PGS001226
(GBE_INI20022)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Birth weight birth weight 6,278
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001226/ScoringFiles/PGS001226.txt.gz
PGS001227
(GBE_INI48)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Waist circumference waist circumference 25,538
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001227/ScoringFiles/PGS001227.txt.gz
PGS001228
(GBE_INI21001)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Body mass index (BMI) body mass index 27,126
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001228/ScoringFiles/PGS001228.txt.gz
PGS001229
(GBE_INI50)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Standing height body height 51,209
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001229/ScoringFiles/PGS001229.txt.gz
PGS001230
(GBE_INI21002)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Body weight body weight 31,222
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001230/ScoringFiles/PGS001230.txt.gz
PGS001232
(GBE_INI20016)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Fluid intelligence score intelligence 10,055
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001232/ScoringFiles/PGS001232.txt.gz
PGS001233
(GBE_INI102)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Heart rate (AR) heart rate 14,455
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001233/ScoringFiles/PGS001233.txt.gz
PGS001234
(GBE_INI23126)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Left arm mass (predicted) body weights and measures 30,666
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001234/ScoringFiles/PGS001234.txt.gz
PGS001235
(GBE_INI23122)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Right arm mass (predicted) body weights and measures 28,988
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001235/ScoringFiles/PGS001235.txt.gz
PGS001236
(GBE_INI3063)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Lung function (FEV1) forced expiratory volume 17,732
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001236/ScoringFiles/PGS001236.txt.gz
PGS001237
(GBE_INI3062)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Lung function (FVC) vital capacity 20,921
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001237/ScoringFiles/PGS001237.txt.gz
PGS001238
(GBE_INI30080)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Platelet count platelet count 24,893
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001238/ScoringFiles/PGS001238.txt.gz
PGS001239
(GBE_INI30000)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 White blood cell count leukocyte quantity 13,785
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001239/ScoringFiles/PGS001239.txt.gz
PGS001240
(GBE_INI30010)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Red blood cell count erythrocyte count 20,480
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001240/ScoringFiles/PGS001240.txt.gz
PGS001241
(GBE_INI3143)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Ankle spacing width anthropometric measurement 21,694
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001241/ScoringFiles/PGS001241.txt.gz
PGS001242
(GBE_INI4100)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Ankle spacing width (L) anthropometric measurement 13,416
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001242/ScoringFiles/PGS001242.txt.gz
PGS001243
(GBE_INI4119)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Ankle spacing width (R) anthropometric measurement 15,134
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001243/ScoringFiles/PGS001243.txt.gz
PGS001244
(GBE_BIN_FC30001727)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Ease of skin tanning (get mildly or occasionally tanned) suntan 958
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001244/ScoringFiles/PGS001244.txt.gz
PGS001245
(GBE_BIN_FC20001727)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Ease of skin tanning (get moderately tanned) suntan 2,693
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001245/ScoringFiles/PGS001245.txt.gz
PGS001246
(GBE_BIN_FC10001727)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Ease of skin tanning (get very tanned) suntan 4,130
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001246/ScoringFiles/PGS001246.txt.gz
PGS001247
(GBE_BIN_FC40001727)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Ease of skin tanning (never tan, only burn) suntan 3,159
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001247/ScoringFiles/PGS001247.txt.gz
PGS001248
(GBE_HC328)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Gout gout 880
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001248/ScoringFiles/PGS001248.txt.gz
PGS001249
(GBE_HC1215)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Gout (time-to-event) gout 1,796
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001249/ScoringFiles/PGS001249.txt.gz
PGS001250
(GBE_HC1304)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Calculus of kidney and ureter (time-to-event) nephrolithiasis,
ureterolithiasis		 341
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001250/ScoringFiles/PGS001250.txt.gz
PGS001251
(GBE_HC1052)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Other interstitial pulmonary diseases (time-to-event) interstitial lung disease 57
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001251/ScoringFiles/PGS001251.txt.gz
PGS001252
(GBE_BIN_FC3002247)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Hearing difficulty and deafness deafness,
hearing loss		 3,731
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001252/ScoringFiles/PGS001252.txt.gz
PGS001253
(GBE_BIN_FC1002247)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Hearing difficulty hearing loss 3,098
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001253/ScoringFiles/PGS001253.txt.gz
PGS001254
(GBE_HC177)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Dupuytren's contracture Dupuytren Contracture 11
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001254/ScoringFiles/PGS001254.txt.gz
PGS001255
(GBE_HC914)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Otosclerosis (time-to-event) otosclerosis 213
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001255/ScoringFiles/PGS001255.txt.gz
PGS001256
(GBE_HC188)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Gallstones gallstones 876
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001256/ScoringFiles/PGS001256.txt.gz
PGS001257
(GBE_INI1737)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Childhood sunburn sunburn 519
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001257/ScoringFiles/PGS001257.txt.gz
PGS001258
(GBE_HC57)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Radius fracture radius fracture 365
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001258/ScoringFiles/PGS001258.txt.gz
PGS001259
(GBE_HC49)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Hayfever/allergic rhinitis seasonal allergic rhinitis 349
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001259/ScoringFiles/PGS001259.txt.gz
PGS001260
(GBE_HC132)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Angina angina pectoris 2,562
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001260/ScoringFiles/PGS001260.txt.gz
PGS001261
(GBE_HC937)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Angina pectoris (time-to-event) angina pectoris 2,524
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001261/ScoringFiles/PGS001261.txt.gz
PGS001262
(GBE_BIN_FC2006150)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Vascular/heart problems diagnosed by doctor Angina angina pectoris 1,852
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001262/ScoringFiles/PGS001262.txt.gz
PGS001263
(GBE_HC440)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Atrial flutter atrial flutter 2,087
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001263/ScoringFiles/PGS001263.txt.gz
PGS001264
(GBE_HC166)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Deep vein thrombosis deep vein thrombosis 839
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001264/ScoringFiles/PGS001264.txt.gz
PGS001265
(GBE_BIN_FC6006152)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Deep vein thrombosis (leg) deep vein thrombosis 1,530
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001265/ScoringFiles/PGS001265.txt.gz
PGS001266
(GBE_BIN_FC1006152)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Deep vein thrombosis (diagnosed by doctor) deep vein thrombosis 1,773
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001266/ScoringFiles/PGS001266.txt.gz
PGS001267
(GBE_HC422)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Ankylosing spondylitis ankylosing spondylitis 10
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001267/ScoringFiles/PGS001267.txt.gz
PGS001268
(GBE_HC1242)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Ankylosing spondylitis (time-to-event) ankylosing spondylitis 10
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001268/ScoringFiles/PGS001268.txt.gz
PGS001270
(GBE_HC151)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Multiple sclerosis multiple sclerosis 41
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001270/ScoringFiles/PGS001270.txt.gz
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