Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS004953
(PRS21_melanoma)
 PGP000675 |
Pandeya N et al. Br J Dermatol (2023)
 Melanoma melanoma 21
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004953/ScoringFiles/PGS004953.txt.gz
PGS000083
(CC_Pancreas)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Pancreatic cancer pancreatic carcinoma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000083/ScoringFiles/PGS000083.txt.gz
PGS000128
(GS-E-AFR)
 PGP000064 |
Wheeler E et al. PLoS Med (2017)
 HbA1c HbA1c measurement 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000128/ScoringFiles/PGS000128.txt.gz
PGS000334
(GRSfull_22)
 PGP000101 |
Zhang Q et al. Nat Commun (2020)
 Late-onset Alzheimer’s disease late-onset Alzheimer's disease 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000334/ScoringFiles/PGS000334.txt.gz
PGS000339
(PRS22_CM)
 PGP000106 |
Law MH et al. Hum Mol Genet (2020)
 Cutaneous melanoma cutaneous melanoma 22
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000339/ScoringFiles/PGS000339.txt.gz
PGS000352
(PRS_HGS)
 PGP000117 |
Barnes DR et al. Genet Med (2020)
 High grade serous ovarian cancer high grade ovarian serous adenocarcinoma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000352/ScoringFiles/PGS000352.txt.gz
PGS000472
(PRSWEB_PHECODE174.1_20001-1002_P_5e-08_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Breast cancer (female) breast carcinoma 22
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000472/ScoringFiles/PGS000472.txt.gz
PGS000603
(PRSWEB_PHECODE187.2_GWAS-Catalog-r2019-05-03-X187.2_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Malignant neoplasm of testis testicular carcinoma 22
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000603/ScoringFiles/PGS000603.txt.gz
PGS000653
(PRSWEB_PHECODE204.4_GWAS-Catalog-r2019-05-03-X204.4_P_5e-08_UKB_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Multiple myeloma multiple myeloma 22
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000653/ScoringFiles/PGS000653.txt.gz
PGS000663
(wGRS22)
 PGP000123 |
Kim J et al. Cancer Epidemiol Biomarkers Prev (2020)
 Pancreatic cancer pancreatic carcinoma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000663/ScoringFiles/PGS000663.txt.gz
PGS000725
(PRS_Pancreas)
 PGP000135 |
Jia G et al. JNCI Cancer Spectr (2020)
 Pancreatic cancer pancreatic carcinoma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000725/ScoringFiles/PGS000725.txt.gz
PGS000794
(CC_Pancreas_IV)
 PGP000186 |
Kachuri L et al. Nat Commun (2020)
 Pancreatic cancer pancreatic carcinoma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000794/ScoringFiles/PGS000794.txt.gz
PGS000799
(GRSw_TAGC)
 PGP000189 |
Dijk FN et al. J Allergy Clin Immunol (2019)
 Asthma asthma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000799/ScoringFiles/PGS000799.txt.gz
PGS000923
(GBE_HC639)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Sarcoidosis (time-to-event) sarcoidosis 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000923/ScoringFiles/PGS000923.txt.gz
PGS001029
(GBE_HC866)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Other disorders of cornea (time-to-event) corneal disease 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001029/ScoringFiles/PGS001029.txt.gz
PGS001824
(portability-PLR_277.4)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Disorders of bilirubin excretion bilirubin metabolism disease 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001824/ScoringFiles/PGS001824.txt.gz
PGS002261
(PRS22_NB)
 PGP000287 |
Testori A et al. Cancer Epidemiol Biomarkers Prev (2022)
 Neuroblastoma neuroblastoma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002261/ScoringFiles/PGS002261.txt.gz
PGS002279
(GRS22_rLVEF)
 PGP000307 |
Forrest IS et al. Eur J Heart Fail (2022)
 Reduced left ventricular ejection fraction left ventricular ejection fraction measurement 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002279/ScoringFiles/PGS002279.txt.gz
PGS002301
(PRS22_melanoma)
 PGP000328 |
Choi J et al. Int J Cancer (2020)
 Melanoma melanoma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002301/ScoringFiles/PGS002301.txt.gz
PGS002740
(PRS22_PC)
 PGP000347 |
Yuan C et al. Ann Oncol (2022)
 Pancreatic cancer pancreatic carcinoma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002740/ScoringFiles/PGS002740.txt.gz
PGS003201
(ExPRSweb_VitD_29343764-GCST005367_PLINK_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D measurement 22
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003201/ScoringFiles/PGS003201.txt.gz
PGS003654
(R_hippocampal_tail_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampal tail volume hippocampal tail volume 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003654/ScoringFiles/PGS003654.txt.gz
PGS003754
(PRS22_OCstepwise)
 PGP000474 |
Hurwitz LM et al. JAMA Netw Open (2023)
 Nonmucinous Epithelial Ovarian Cancer ovarian carcinoma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003754/ScoringFiles/PGS003754.txt.gz
PGS000056
(PD_PRS)
 PGP000041 |
Paul KC et al. JAMA Neurol (2018)
 Parkinson's disease Parkinson disease 23
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000056/ScoringFiles/PGS000056.txt.gz
PGS000458
(PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Basal cell carcinoma basal cell carcinoma 23
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000458/ScoringFiles/PGS000458.txt.gz
PGS000618
(PRSWEB_PHECODE191.1_GWAS-Catalog-r2019-05-03-X191.1_P_5e-08_UKB_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Brain and nervous system cancer central nervous system cancer 23
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000618/ScoringFiles/PGS000618.txt.gz
PGS000764
(PRS23_POAG)
 PGP000169 |
Cole BS et al. Invest Ophthalmol Vis Sci (2021)
 Primary-open angle glaucoma open-angle glaucoma 23
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000764/ScoringFiles/PGS000764.txt.gz
PGS000823
(GRS23_AD)
 PGP000207 |
van der Lee SJ et al. Lancet Neurol (2018)
 Alzheimer's disease Alzheimer disease 23
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000823/ScoringFiles/PGS000823.txt.gz
PGS002281
(PRS23_MM)
 PGP000310 |
Canzian F et al. Eur J Hum Genet (2021)
 Multiple myeloma multiple myeloma 23
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002281/ScoringFiles/PGS002281.txt.gz
PGS002289
(GRS23_AD)
 PGP000316 |
Zimmerman SC et al. JAMA Netw Open (2022)
 Late-onset Alzheimer's disease late-onset Alzheimer's disease 23
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002289/ScoringFiles/PGS002289.txt.gz
PGS002306
(PRS23_MM)
 PGP000328 |
Choi J et al. Int J Cancer (2020)
 Multiple myeloma multiple myeloma 23
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002306/ScoringFiles/PGS002306.txt.gz
PGS003200
(ExPRSweb_VitD_29343764-GCST005367_PT_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D measurement 23
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003200/ScoringFiles/PGS003200.txt.gz
PGS003437
(PRS23_TC)
 PGP000439 |
Feng X et al. JAMA Netw Open (2022)
 Thyroid cancer thyroid carcinoma 23
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003437/ScoringFiles/PGS003437.txt.gz
PGS004587
(PRS23_AD)
 PGP000566 |
Gu X et al. Ecotoxicol Environ Saf (2023)
 Atopic dermatitis atopic eczema 23
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004587/ScoringFiles/PGS004587.txt.gz
PGS004695
(PRS23_IPF)
 PGP000598 |
Wang X et al. Chemosphere (2023)
 Idiopathic pulmonary fibrosis idiopathic pulmonary fibrosis 23
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004695/ScoringFiles/PGS004695.txt.gz
PGS004797
(migraine_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Migraine migraine disorder 23
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004797/ScoringFiles/PGS004797.txt.gz
PGS004955
(PRS23)
 PGP000678 |
Zhu M et al. Int J Epidemiol (2023)
 Lung cancer lung carcinoma 23
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004955/ScoringFiles/PGS004955.txt.gz
PGS000079
(CC_Melanoma)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Melanoma melanoma 24
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000079/ScoringFiles/PGS000079.txt.gz
PGS000459
(PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_PT_UKB_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Basal cell carcinoma basal cell carcinoma 24
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000459/ScoringFiles/PGS000459.txt.gz
PGS000790
(CC_Melanoma_IV)
 PGP000186 |
Kachuri L et al. Nat Commun (2020)
 Melanoma melanoma 24
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000790/ScoringFiles/PGS000790.txt.gz
PGS001299
(GBE_cancer1041)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Cervical cancer cervical carcinoma 24
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001299/ScoringFiles/PGS001299.txt.gz
PGS002729
(PRS_knee)
 PGP000336 |
Sedaghati-Khayat B et al. Arthritis Rheumatol (2022)
 Knee osteoarthritis osteoarthritis, knee 24
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002729/ScoringFiles/PGS002729.txt.gz
PGS002736
(PRS24)
 PGP000344 |
Bafligil C et al. Genet Med (2022)
 Endometrial cancer endometrial carcinoma 24
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002736/ScoringFiles/PGS002736.txt.gz
PGS003020
(ExPRSweb_Hypertension_finngen-R4-FG_PT_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Hypertension hypertension 24
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003020/ScoringFiles/PGS003020.txt.gz
PGS003021
(ExPRSweb_Hypertension_finngen-R4-FG_PLINK_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Hypertension hypertension 24
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003021/ScoringFiles/PGS003021.txt.gz
PGS003450
(PRS24_MM)
 PGP000448 |
Berndt SI et al. Leukemia (2022)
 Multiple myeloma multiple myeloma 24
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003450/ScoringFiles/PGS003450.txt.gz
PGS000484
(PRSWEB_PHECODE174.1_D05_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Breast cancer (female) breast carcinoma 25
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000484/ScoringFiles/PGS000484.txt.gz
PGS001281
(GBE_HC86)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Migraine migraine disorder 25
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001281/ScoringFiles/PGS001281.txt.gz
PGS001773
(PRS_atopicDermatitis)
 PGP000253 |
Simard M et al. J Allergy Clin Immunol (2020)
 Moderate-to-severe atopic dermatitis atopic eczema 25
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001773/ScoringFiles/PGS001773.txt.gz
PGS002827
(ExPRSweb_Alcohol_20403_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Alcohol consumption alcohol consumption measurement 25
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002827/ScoringFiles/PGS002827.txt.gz
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