Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000942
(GBE_HC225)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Cholecystitis Cholecystitis 391
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000942/ScoringFiles/PGS000942.txt.gz
PGS000941
(GBE_HC868)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Iridocyclitis (time-to-event) Iridocyclitis 1
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000941/ScoringFiles/PGS000941.txt.gz
PGS000940
(GBE_HC1132)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Intestinal malabsorption (time-to-event) Malabsorption 443
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000940/ScoringFiles/PGS000940.txt.gz
PGS000939
(GBE_HC310)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Hiatus hernia Hiatus hernia 2,553
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000939/ScoringFiles/PGS000939.txt.gz
PGS000938
(GBE_HC990)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Varicose veins of lower extremities (time-to-event) Varicose veins 2,563
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000938/ScoringFiles/PGS000938.txt.gz
PGS000937
(GBE_HC401)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Varicose veins Varicose veins 2,603
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000937/ScoringFiles/PGS000937.txt.gz
PGS000936
(GBE_HC269)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 High cholesterol Hypercholesterolemia 5,987
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000936/ScoringFiles/PGS000936.txt.gz
PGS000935
(GBE_INI2966)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 High blood pressure, age at diagnosis age at diagnosis,
Increased blood pressure		 370
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000935/ScoringFiles/PGS000935.txt.gz
PGS000934
(GBE_HC156)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Nasal polyps Nasal polyposis 129
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000934/ScoringFiles/PGS000934.txt.gz
PGS000933
(GBE_HC1024)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Nasal polyp (time-to-event) Nasal polyposis 433
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000933/ScoringFiles/PGS000933.txt.gz
PGS000932
(GBE_HC1248)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Other intervertebral disk disorders (time-to-event) vertebral column disorder 111
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000932/ScoringFiles/PGS000932.txt.gz
PGS000931
(GBE_BIN_FC11006152)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Blood clot or deep vein thrombosis (diagnosed by doctor) deep vein thrombosis,
thrombotic disease		 534
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000931/ScoringFiles/PGS000931.txt.gz
PGS000930
(GBE_BIN_FC3006152)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Blood clot (diagnosed by doctor) thrombotic disease 118
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000930/ScoringFiles/PGS000930.txt.gz
PGS000929
(GBE_HC1583)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 All-cause dementia (algorithmically-defined) dementia 6
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000929/ScoringFiles/PGS000929.txt.gz
PGS000928
(GBE_HC644)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Other non-toxic goitre (time-to-event) nontoxic goiter 170
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000928/ScoringFiles/PGS000928.txt.gz
PGS000927
(GBE_HC1158)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Other dermatitis (time-to-event) dermatitis 242
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000927/ScoringFiles/PGS000927.txt.gz
PGS000926
(GBE_QT_FC1001220)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Daytime dozing / sleeping (narcolepsy) narcolepsy 4,194
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000926/ScoringFiles/PGS000926.txt.gz
PGS000925
(GBE_HC1020)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Unspecified acute lower respiratory infection (time-to-event) respiratory tract infectious disorder 402
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000925/ScoringFiles/PGS000925.txt.gz
PGS000924
(GBE_HC702)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Disorders of porphyrin and bilirubin metabolism (time-to-event) bilirubin metabolism disease,
porphyrin metabolism disease		 5
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000924/ScoringFiles/PGS000924.txt.gz
PGS000923
(GBE_HC639)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Sarcoidosis (time-to-event) sarcoidosis 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000923/ScoringFiles/PGS000923.txt.gz
PGS000922
(GBE_HC170)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Sarcoidosis sarcoidosis 12
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000922/ScoringFiles/PGS000922.txt.gz
PGS000921
(PRS_BMI)
 PGP000243 |
Borisevich D et al. PLoS One (2021)
 Body mass index (BMI) body mass index 1,947,711
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000921/ScoringFiles/PGS000921.txt.gz
PGS000914
(PRS6_EC)
 PGP000241 |
Wang M et al. Sci Rep (2021)
 Abnormal electrocardiogram Abnormal EKG 6
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000914/ScoringFiles/PGS000914.txt.gz
PGS000913
(ukb_sbp_prs)
 PGP000240 |
Vaura F et al. Hypertension (2021)
 Systolic blood pressure systolic blood pressure 1,098,015
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000913/ScoringFiles/PGS000913.txt.gz
PGS000912
(ukb_dbp_prs)
 PGP000240 |
Vaura F et al. Hypertension (2021)
 Diastolic blood pressure diastolic blood pressure 1,098,015
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000912/ScoringFiles/PGS000912.txt.gz
PGS000911
(PRS_IS)
 PGP000239 |
O'Sullivan JW et al. Circ Genom Precis Med (2021)
 Ischemic stroke stroke,
Ischemic stroke		 530,933
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000911/ScoringFiles/PGS000911.txt.gz
PGS000910
(PRS_BMI)
 PGP000238 |
Campos AI et al. Commun Med (Lond) (2021)
 Body mass index (BMI) body mass index 735,440
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000910/ScoringFiles/PGS000910.txt.gz
PGS000909
(PRS_Headaches)
 PGP000238 |
Campos AI et al. Commun Med (Lond) (2021)
 Headache Headache 2,862,172
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000909/ScoringFiles/PGS000909.txt.gz
PGS000908
(PRS_Insomnia)
 PGP000238 |
Campos AI et al. Commun Med (Lond) (2021)
 Insomnia insomnia 2,746,982
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000908/ScoringFiles/PGS000908.txt.gz
PGS000907
(PRS_MDD)
 PGP000238 |
Campos AI et al. Commun Med (Lond) (2021)
 Major depressive disorder major depressive disorder 1,773,528
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000907/ScoringFiles/PGS000907.txt.gz
PGS000906
(PRS-5)
 PGP000237 |
Tesi N et al. J Gerontol A Biol Sci Med Sci (2021)
 Longevity life span trait 330
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000906/ScoringFiles/PGS000906.txt.gz
PGS000905
(PRS743_PR)
 PGP000236 |
Ntalla I et al. Nat Commun (2020)
 PR interval PR interval 743
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000905/ScoringFiles/PGS000905.txt.gz
PGS000904
(PRS582_PR)
 PGP000236 |
Ntalla I et al. Nat Commun (2020)
 PR interval PR interval 582
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000904/ScoringFiles/PGS000904.txt.gz
PGS000903
(PRS1805_PD)
 PGP000235 |
Nalls MA et al. Lancet Neurol (2019)
 Parkinson's disease Parkinson disease 1,805
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000903/ScoringFiles/PGS000903.txt.gz
PGS000902
(PRS90_PD)
 PGP000235 |
Nalls MA et al. Lancet Neurol (2019)
 Parkinson's disease Parkinson disease 90
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000902/ScoringFiles/PGS000902.txt.gz
PGS000901
(PRS_SBP_m)
 PGP000233 |
Kauko A et al. Hypertension (2021)
 Systolic blood pressure (male) systolic blood pressure,
male		 1,098,015
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000901/ScoringFiles/PGS000901.txt.gz
PGS000900
(PRS_SBP_f)
 PGP000233 |
Kauko A et al. Hypertension (2021)
 Systolic blood pressure (female) systolic blood pressure,
female		 1,098,015
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000900/ScoringFiles/PGS000900.txt.gz
PGS000899
(PRS176_CHD)
 PGP000232 |
Feitosa MF et al. Circ Genom Precis Med (2021)
 Coronary heart disease coronary artery disease 176
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000899/ScoringFiles/PGS000899.txt.gz
PGS000898
(PRS39_AD)
 PGP000231 |
de Rojas I et al. Nat Commun (2021)
 Alzheimer's disease Alzheimer disease 40
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000898/ScoringFiles/PGS000898.txt.gz
PGS000897
(GLGC_2021_SAS_LDL_PRS_weights_PT)
 PGP000230 |
Graham SE et al. Nature (2021)
 LDL cholesterol low density lipoprotein cholesterol measurement 13
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000897/ScoringFiles/PGS000897.txt.gz
PGS000896
(GLGC_2021_SAS_LDL_PRS_weights_PRS-CS)
 PGP000230 |
Graham SE et al. Nature (2021)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,100,062
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000896/ScoringFiles/PGS000896.txt.gz
PGS000895
(GLGC_2021_HIS_LDL_PRS_weights_PT)
 PGP000230 |
Graham SE et al. Nature (2021)
 LDL cholesterol low density lipoprotein cholesterol measurement 76
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000895/ScoringFiles/PGS000895.txt.gz
PGS000894
(GLGC_2021_HIS_LDL_PRS_weights_PRS-CS)
 PGP000230 |
Graham SE et al. Nature (2021)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,175,595
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000894/ScoringFiles/PGS000894.txt.gz
PGS000893
(GLGC_2021_EUR_LDL_PRS_weights_PT)
 PGP000230 |
Graham SE et al. Nature (2021)
 LDL cholesterol low density lipoprotein cholesterol measurement 5,427
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000893/ScoringFiles/PGS000893.txt.gz
PGS000892
(GLGC_2021_EUR_LDL_PRS_weights_PRS-CS)
 PGP000230 |
Graham SE et al. Nature (2021)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,119,211
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000892/ScoringFiles/PGS000892.txt.gz
PGS000891
(GLGC_2021_EAS_LDL_PRS_weights_PT)
 PGP000230 |
Graham SE et al. Nature (2021)
 LDL cholesterol low density lipoprotein cholesterol measurement 66
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000891/ScoringFiles/PGS000891.txt.gz
PGS000890
(GLGC_2021_EAS_LDL_PRS_weights_PRS-CS)
 PGP000230 |
Graham SE et al. Nature (2021)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,029,158
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000890/ScoringFiles/PGS000890.txt.gz
PGS000889
(GLGC_2021_ALL_LDL_PRS_weights_PT)
 PGP000230 |
Graham SE et al. Nature (2021)
 LDL cholesterol low density lipoprotein cholesterol measurement 9,009
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000889/ScoringFiles/PGS000889.txt.gz
PGS000888
(GLGC_2021_ALL_LDL_PRS_weights_PRS-CS)
 PGP000230 |
Graham SE et al. Nature (2021)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,239,184
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000888/ScoringFiles/PGS000888.txt.gz
PGS000887
(GLGC_2021_AFR_LDL_PRS_weights_PT)
 PGP000230 |
Graham SE et al. Nature (2021)
 LDL cholesterol low density lipoprotein cholesterol measurement 295
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000887/ScoringFiles/PGS000887.txt.gz
Showing 4201 to 4250 of 5134 rows