Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
Scoring File (FTP Link)
PGS001159
(GBE_INI23114)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Right leg mass (predicted) body composition measurement 32,103
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001159/ScoringFiles/PGS001159.txt.gz
PGS001158
(GBE_INI23118)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Left leg mass (predicted) body composition measurement 30,421
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001158/ScoringFiles/PGS001158.txt.gz
PGS001157
(GBE_INI23107)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Impedance (right leg) body composition measurement 30,300
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001157/ScoringFiles/PGS001157.txt.gz
PGS001156
(GBE_INI23109)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Impedance (right arm) body composition measurement 30,140
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001156/ScoringFiles/PGS001156.txt.gz
PGS001155
(GBE_INI23108)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Impedance (left leg) body composition measurement 28,999
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001155/ScoringFiles/PGS001155.txt.gz
PGS001154
(GBE_INI23110)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Impedance (left arm) body composition measurement 26,740
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001154/ScoringFiles/PGS001154.txt.gz
PGS001153
(GBE_BIN_FC18006155)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Folic acid or folate (Vitamin B9) folic acid level 5
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001153/ScoringFiles/PGS001153.txt.gz
PGS001152
(GBE_INI30070)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Red blood cell distribution width Red cell distribution width 10,179
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001152/ScoringFiles/PGS001152.txt.gz
PGS001150
(GBE_INI1160)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Sleep duration sleep duration trait 4,106
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001150/ScoringFiles/PGS001150.txt.gz
PGS001149
(GBE_INI23100)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Whole body fat mass fat pad mass 27,550
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001149/ScoringFiles/PGS001149.txt.gz
PGS001148
(GBE_INI23128)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Trunk fat mass fat pad mass 29,233
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001148/ScoringFiles/PGS001148.txt.gz
PGS001147
(GBE_INI23112)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Leg fat mass (R) fat pad mass 23,565
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001147/ScoringFiles/PGS001147.txt.gz
PGS001146
(GBE_INI23121)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Arm fat-free mass (R) fat pad mass 29,063
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001146/ScoringFiles/PGS001146.txt.gz
PGS001145
(GBE_INI23120)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Arm fat mass (R) fat pad mass 23,528
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001145/ScoringFiles/PGS001145.txt.gz
PGS001144
(GBE_INI23124)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Arm fat mass (L) fat pad mass 23,676
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001144/ScoringFiles/PGS001144.txt.gz
PGS001143
(GBE_INI25867)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter in Parietal Operculum Cortex (R) grey matter volume measurement 699
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001143/ScoringFiles/PGS001143.txt.gz
PGS001142
(GBE_INI25829)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter in Intracalcarine Cortex (R) grey matter volume measurement 2,215
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001142/ScoringFiles/PGS001142.txt.gz
PGS001141
(GBE_BIN_FC10001757)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Facial ageing (looking younger than you are) skin aging 7,676
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001141/ScoringFiles/PGS001141.txt.gz
PGS001140
(GBE_HC1190)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Seborrheic keratosis (time-to-event) seborrheic keratosis 1,368
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001140/ScoringFiles/PGS001140.txt.gz
PGS001139
(GBE_BIN_FC10002644)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Light smokers, at least 100 smokes in lifetime smoking behavior trait 11
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001139/ScoringFiles/PGS001139.txt.gz
PGS001138
(GBE_BIN10030820)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Rheumatoid factor [> 16 IU/mL] rheumatoid factor measurement 456
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001138/ScoringFiles/PGS001138.txt.gz
PGS001137
(GBE_HC302)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Retinal detachment retinal detachment 321
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001137/ScoringFiles/PGS001137.txt.gz
PGS001136
(GBE_HC413)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Hematologic disease, genetic hematologic disorder 30
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001136/ScoringFiles/PGS001136.txt.gz
PGS001135
(GBE_HC78)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Arthritis (nos) arthritic joint disease 1,028
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001135/ScoringFiles/PGS001135.txt.gz
PGS001134
(GBE_INI4080)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Systolic BP (AR) systolic blood pressure 15,481
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001134/ScoringFiles/PGS001134.txt.gz
PGS001133
(GBE_INI4079)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Diastolic BP (AR) diastolic blood pressure 14,103
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001133/ScoringFiles/PGS001133.txt.gz
PGS001132
(GBE_FH1113)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Family history of chronic bronchitis/emphysema family history 1,530
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001132/ScoringFiles/PGS001132.txt.gz
PGS001131
(GBE_HC530)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Zoster [herpes zoster] (time-to-event) herpes zoster 82
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001131/ScoringFiles/PGS001131.txt.gz
PGS001130
(GBE_INI2887)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Number of cigarettes previously smoked per day cigarettes per day measurement 725
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001130/ScoringFiles/PGS001130.txt.gz
PGS001129
(GBE_BIN_FC30022506)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Smoking status (ever vs never smokers) smoking status measurement 974
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001129/ScoringFiles/PGS001129.txt.gz
PGS001128
(GBE_BIN_FC20020116)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Previous smoker smoking status measurement 4,348
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001128/ScoringFiles/PGS001128.txt.gz
PGS001127
(GBE_BIN_FC10020116)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Never Smoker smoking status measurement 12,310
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001127/ScoringFiles/PGS001127.txt.gz
PGS001126
(GBE_INI1498)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Coffee intake coffee consumption measurement 3,154
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001126/ScoringFiles/PGS001126.txt.gz
PGS001125
(GBE_BIN_FC20001508)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Coffee consumption (instant coffee) coffee consumption measurement 432
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001125/ScoringFiles/PGS001125.txt.gz
PGS001124
(GBE_BIN_FC30001508)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Coffee consumption (ground coffee) coffee consumption measurement 9,694
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001124/ScoringFiles/PGS001124.txt.gz
PGS001123
(GBE_BIN100240)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Coffee consumption coffee consumption measurement 48
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001123/ScoringFiles/PGS001123.txt.gz
PGS001120
(GBE_INI47)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Right hand grip strength grip strength measurement 12,644
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001120/ScoringFiles/PGS001120.txt.gz
PGS001119
(GBE_INI46)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Left hand grip strength grip strength measurement 13,767
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001119/ScoringFiles/PGS001119.txt.gz
PGS001118
(GBE_BIN_FC10002492)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Taking other prescription medications drug use measurement 1,846
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001118/ScoringFiles/PGS001118.txt.gz
PGS001117
(GBE_BIN_FC10002986)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Started insulin within one year diagnosis of diabetes insulin use measurement 68
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001117/ScoringFiles/PGS001117.txt.gz
PGS001116
(GBE_BIN_FC2006154)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Ibuprofen use NSAID use measurement 174
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001116/ScoringFiles/PGS001116.txt.gz
PGS001115
(GBE_BIN_FC9006154)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Paracetamol use self-reported NSAID use measurement,
self-reported trait
4,673
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001115/ScoringFiles/PGS001115.txt.gz
PGS001114
(GBE_BIN_FC8006154)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Ibuprofen use, self-reported NSAID use measurement,
self-reported trait
419
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001114/ScoringFiles/PGS001114.txt.gz
PGS001113
(GBE_BIN_FC7006154)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Aspirin use self-reported aspirin use measurement 790
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001113/ScoringFiles/PGS001113.txt.gz
PGS001112
(GBE_BIN_FC1006154)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Aspirin aspirin use measurement 499
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001112/ScoringFiles/PGS001112.txt.gz
PGS001111
(GBE_cancer1038)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Male genital tract cancer male reproductive organ cancer 313
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001111/ScoringFiles/PGS001111.txt.gz
PGS001110
(GBE_HC1209)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reactive arthropathies (time-to-event) reactive arthritis 6
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001110/ScoringFiles/PGS001110.txt.gz
PGS001109
(GBE_HC1021)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Vasomotor and allergic rhinitis (time-to-event) vasomotor rhinitis,
allergic rhinitis
1,910
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001109/ScoringFiles/PGS001109.txt.gz
PGS001108
(GBE_INI23105)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Basal metabolic rate base metabolic rate measurement 32,154
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001108/ScoringFiles/PGS001108.txt.gz
PGS001107
(GBE_BIN30030510)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
UACR [> 30 mg/g] urinary albumin to creatinine ratio 1,040
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001107/ScoringFiles/PGS001107.txt.gz