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,
EFO_0001645
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breast cancer
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,
BMI
,
EFO_0001645
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PGS Catalog
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Polygenic Scores (PGS)
Polygenic Scores (PGS)
Filter PGS by Participant Ancestry
Individuals included in:
Any Stage [G, D, E]
All Stages combined [G + D + E]
Development [G, D]
- GWAS [G]
- Score development [D]
PGS Evaluation [E]
G
- Source of Variant Associations (
G
WAS)
D
- Score
D
evelopment/Training
E
- PGS
E
valuation
List of ancestries includes:
--
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Display options:
Show European ancestry data
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only
Multi-ancestry data
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name
PGS Publication ID
(PGP)
Reported Trait
Mapped Trait(s)
(Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File
(FTP Link)
PGS000836
(F-INS)
PGP000211
|
Aly DM
et al.
Nat Genet (2021)
Fasting insulin
blood insulin amount
223
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000836/ScoringFiles/PGS000836.txt.gz
PGS000835
(ISR)
PGP000211
|
Aly DM
et al.
Nat Genet (2021)
Insulin secretion rate
insulin secretion trait
319
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000835/ScoringFiles/PGS000835.txt.gz
PGS000834
(CIR)
PGP000211
|
Aly DM
et al.
Nat Genet (2021)
Corrected insulin response (at 30mins during OGTT)
insulin response measurement
220
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000834/ScoringFiles/PGS000834.txt.gz
PGS000833
(T1D)
PGP000211
|
Aly DM
et al.
Nat Genet (2021)
Type 1 diabetes (T1D)
type 1 diabetes mellitus
66
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000833/ScoringFiles/PGS000833.txt.gz
PGS000832
(T2D-GRS)
PGP000211
|
Aly DM
et al.
Nat Genet (2021)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
384
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000832/ScoringFiles/PGS000832.txt.gz
PGS000831
(Total_cholesterol_PGS)
PGP000210
|
Zubair N
et al.
Sci Rep (2019)
Total cholesterol
total cholesterol measurement
1,032
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000831/ScoringFiles/PGS000831.txt.gz
- Check
Terms/Licenses
PGS000830
(BMI_PGS_F)
PGP000210
|
Zubair N
et al.
Sci Rep (2019)
Body mass index (BMI) (female)
body mass index
,
female
372
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000830/ScoringFiles/PGS000830.txt.gz
- Check
Terms/Licenses
PGS000829
(BMI_PGS_M)
PGP000210
|
Zubair N
et al.
Sci Rep (2019)
Body mass index (BMI) (male)
body mass index
,
male
290
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000829/ScoringFiles/PGS000829.txt.gz
- Check
Terms/Licenses
PGS000828
(WaistCircumference_PGS_F)
PGP000210
|
Zubair N
et al.
Sci Rep (2019)
Waist circumference (female)
waist circumference
,
female
149
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000828/ScoringFiles/PGS000828.txt.gz
- Check
Terms/Licenses
PGS000827
(WaistCircumference_PGS_M)
PGP000210
|
Zubair N
et al.
Sci Rep (2019)
Waist circumference (male)
waist circumference
,
male
113
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000827/ScoringFiles/PGS000827.txt.gz
- Check
Terms/Licenses
PGS000826
(Triglycerides_PGS)
PGP000210
|
Zubair N
et al.
Sci Rep (2019)
Triglycerides
triglyceride measurement
769
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000826/ScoringFiles/PGS000826.txt.gz
- Check
Terms/Licenses
PGS000825
(HDL-C_PGS)
PGP000210
|
Zubair N
et al.
Sci Rep (2019)
HDL cholesterol
high density lipoprotein cholesterol measurement
883
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000825/ScoringFiles/PGS000825.txt.gz
- Check
Terms/Licenses
PGS000824
(LDL-C_PGS)
PGP000210
|
Zubair N
et al.
Sci Rep (2019)
LDL cholesterol
low density lipoprotein cholesterol measurement
809
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000824/ScoringFiles/PGS000824.txt.gz
- Check
Terms/Licenses
PGS000823
(GRS23_AD)
PGP000207
|
van der Lee SJ
et al.
Lancet Neurol (2018)
Alzheimer's disease
Alzheimer disease
23
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000823/ScoringFiles/PGS000823.txt.gz
PGS000822
(GRS_UACR)
PGP000206
|
Teumer A
et al.
Nat Commun (2019)
Urinary albumin to creatinine ratio
urinary albumin to creatinine ratio
59
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000822/ScoringFiles/PGS000822.txt.gz
PGS000821
(PRS_hypomed)
PGP000204
|
Luo J
et al.
Clin Cancer Res (2021)
Thyroid medication use
Thyroid preparation use measurement
872,391
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000821/ScoringFiles/PGS000821.txt.gz
PGS000820
(PRS_hypothyroidism)
PGP000204
|
Luo J
et al.
Clin Cancer Res (2021)
Hypothyroidism (self-reported)
hypothyroidism
890,908
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000820/ScoringFiles/PGS000820.txt.gz
PGS000819
(PRS_DR)
PGP000203
|
Forrest IS
et al.
Hum Mol Genet (2021)
Diabetic retinopathy
diabetic retinopathy
3,537,914
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000819/ScoringFiles/PGS000819.txt.gz
PGS000818
(GRS_Metabo)
PGP000202
|
Bauer A
et al.
Genet Epidemiol (2021)
Coronary heart disease
coronary artery disease
138
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000818/ScoringFiles/PGS000818.txt.gz
PGS000817
(GRS200_GGT)
PGP000201
|
Pazoki R
et al.
Nat Commun (2021)
Gamma-glutamyl transferase
serum gamma-glutamyl transferase measurement
200
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000817/ScoringFiles/PGS000817.txt.gz
PGS000816
(GRS150_ALT)
PGP000201
|
Pazoki R
et al.
Nat Commun (2021)
Alanine transaminase
serum alanine aminotransferase amount
150
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000816/ScoringFiles/PGS000816.txt.gz
PGS000815
(GRS290_ALP)
PGP000201
|
Pazoki R
et al.
Nat Commun (2021)
Alkaline phosphatase
alkaline phosphatase measurement
290
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000815/ScoringFiles/PGS000815.txt.gz
PGS000814
(GRS12_LDLc)
PGP000200
|
Talmud PJ
et al.
Lancet (2013)
LDL cholesterol
low density lipoprotein cholesterol measurement
16
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000814/ScoringFiles/PGS000814.txt.gz
PGS000813
(PRS46_melanoma)
PGP000197
|
Potjer TP
et al.
J Med Genet (2020)
Melanoma
melanoma
46
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000813/ScoringFiles/PGS000813.txt.gz
PGS000812
(AD-PRS_57)
PGP000196
|
Najar J
et al.
Alzheimers Dement (Amst) (2021)
Alzheimer's disease
Alzheimer disease
57
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000812/ScoringFiles/PGS000812.txt.gz
PGS000811
(AD-PRS_39)
PGP000196
|
Najar J
et al.
Alzheimers Dement (Amst) (2021)
Alzheimer's disease
Alzheimer disease
39
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000811/ScoringFiles/PGS000811.txt.gz
PGS000810
(wGRS136_Allergy)
PGP000195
|
Ferreira MA
et al.
Nat Genet (2017)
Allergic disease (asthma, hay fever or eczema)
allergic disease
136
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000810/ScoringFiles/PGS000810.txt.gz
PGS000809
(PRS127_MS)
PGP000194
|
Barnes CLK
et al.
Eur J Hum Genet (2021)
Multiple sclerosis
multiple sclerosis
127
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000809/ScoringFiles/PGS000809.txt.gz
PGS000808
(GRS582_T2Dhis)
PGP000193
|
Polfus LM
et al.
HGG Adv (2021)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
582
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000808/ScoringFiles/PGS000808.txt.gz
- Check
Terms/Licenses
PGS000807
(GRS582_T2Dasn)
PGP000193
|
Polfus LM
et al.
HGG Adv (2021)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
582
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000807/ScoringFiles/PGS000807.txt.gz
- Check
Terms/Licenses
PGS000806
(GRS582_T2Dafr)
PGP000193
|
Polfus LM
et al.
HGG Adv (2021)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
582
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000806/ScoringFiles/PGS000806.txt.gz
- Check
Terms/Licenses
PGS000805
(GRS582_T2Deur)
PGP000193
|
Polfus LM
et al.
HGG Adv (2021)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
582
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000805/ScoringFiles/PGS000805.txt.gz
- Check
Terms/Licenses
PGS000804
(GRS582_T2Dmulti)
PGP000193
|
Polfus LM
et al.
HGG Adv (2021)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
582
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000804/ScoringFiles/PGS000804.txt.gz
- Check
Terms/Licenses
PGS000803
(wGRS41_SLE)
PGP000192
|
Kawai VK
et al.
Lupus (2021)
Systemic lupus erythematosus
systemic lupus erythematosus
41
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000803/ScoringFiles/PGS000803.txt.gz
PGS000802
(CRC_19)
PGP000191
|
He CY
et al.
Genomics (2021)
Colorectal cancer
colorectal cancer
19
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000802/ScoringFiles/PGS000802.txt.gz
PGS000801
(GRS40_CRC)
PGP000190
|
Hang D
et al.
Int J Epidemiol (2020)
Colorectal cancer
colorectal cancer
40
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000801/ScoringFiles/PGS000801.txt.gz
PGS000800
(GRSw_SHARE)
PGP000189
|
Dijk FN
et al.
J Allergy Clin Immunol (2019)
Allergic disease
allergic disease
133
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000800/ScoringFiles/PGS000800.txt.gz
PGS000799
(GRSw_TAGC)
PGP000189
|
Dijk FN
et al.
J Allergy Clin Immunol (2019)
Asthma
asthma
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000799/ScoringFiles/PGS000799.txt.gz
PGS000798
(157SNP_GRS)
PGP000187
|
Severance LM
et al.
J Cardiovasc Comput Tomogr (2019)
Coronary heart disease
coronary artery disease
157
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000798/ScoringFiles/PGS000798.txt.gz
PGS000797
(CC_Thyroid_IV)
PGP000186
|
Kachuri L
et al.
Nat Commun (2020)
Thyroid cancer
thyroid carcinoma
12
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000797/ScoringFiles/PGS000797.txt.gz
PGS000796
(CC_Testis_IV)
PGP000186
|
Kachuri L
et al.
Nat Commun (2020)
Testicular cancer
testicular carcinoma
,
Testicular Germ Cell Tumor
52
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000796/ScoringFiles/PGS000796.txt.gz
PGS000795
(CC_Prostate_IV)
PGP000186
|
Kachuri L
et al.
Nat Commun (2020)
Prostate cancer
prostate carcinoma
161
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000795/ScoringFiles/PGS000795.txt.gz
PGS000794
(CC_Pancreas_IV)
PGP000186
|
Kachuri L
et al.
Nat Commun (2020)
Pancreatic cancer
pancreatic carcinoma
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000794/ScoringFiles/PGS000794.txt.gz
PGS000793
(CC_Ovary_IV)
PGP000186
|
Kachuri L
et al.
Nat Commun (2020)
Ovarian cancer
ovarian carcinoma
36
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000793/ScoringFiles/PGS000793.txt.gz
PGS000792
(CC_Oral_IV)
PGP000186
|
Kachuri L
et al.
Nat Commun (2020)
Oral cavity and pharyngeal cancers
oral cavity cancer
,
pharynx cancer
14
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000792/ScoringFiles/PGS000792.txt.gz
PGS000791
(CC_NHL_IV)
PGP000186
|
Kachuri L
et al.
Nat Commun (2020)
Non-Hodgkin's lymphoma
non-Hodgkins lymphoma
19
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000791/ScoringFiles/PGS000791.txt.gz
PGS000790
(CC_Melanoma_IV)
PGP000186
|
Kachuri L
et al.
Nat Commun (2020)
Melanoma
melanoma
24
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000790/ScoringFiles/PGS000790.txt.gz
PGS000789
(CC_Lung_IV)
PGP000186
|
Kachuri L
et al.
Nat Commun (2020)
Lung cancer
lung carcinoma
109
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000789/ScoringFiles/PGS000789.txt.gz
PGS000788
(CC_LL_IV)
PGP000186
|
Kachuri L
et al.
Nat Commun (2020)
Lymphocytic leukemia
lymphoid leukemia
75
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000788/ScoringFiles/PGS000788.txt.gz
PGS000787
(CC_Kidney_IV)
PGP000186
|
Kachuri L
et al.
Nat Commun (2020)
Kidney cancer
renal cell carcinoma
19
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000787/ScoringFiles/PGS000787.txt.gz
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