Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS003808
(logTG_EAS_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 109
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003808/ScoringFiles/PGS003808.txt.gz
PGS005164
(PRS-BC)
 PGP000711 |
Zhu M et al. PLoS Med (2025)
 Breast cancer breast carcinoma 109
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005164/ScoringFiles/PGS005164.txt.gz
PGS000433
(PRSWEB_PHECODE172.2_C3-OTHER-SKIN_P_5e-08_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Other non-epithelial skin cancer skin cancer 108
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000433/ScoringFiles/PGS000433.txt.gz
PGS003250
(ExPRSweb_Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estimated glomerular filtration rate (Creatine) glomerular filtration rate,
creatine amount		 108
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003250/ScoringFiles/PGS003250.txt.gz
PGS003251
(ExPRSweb_Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estimated glomerular filtration rate (Creatine) glomerular filtration rate,
creatine amount		 108
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003251/ScoringFiles/PGS003251.txt.gz
PGS003401
(TG.PS)
 PGP000418 |
Pieri K et al. Int J Cardiol (2022)
 Triglyceride levels triglyceride measurement 108
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003401/ScoringFiles/PGS003401.txt.gz
PGS004908
(PRS107_KC)
 PGP000640 |
Purdue MP et al. Nat Genet (2024)
 Kidney cancer renal carcinoma 107
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004908/ScoringFiles/PGS004908.txt.gz
PGS000615
(PRSWEB_PHECODE189.2_UKBB-SAIGE-HRC-X189.2_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Bladder cancer urinary bladder carcinoma 106
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000615/ScoringFiles/PGS000615.txt.gz
PGS002747
(PRS_GI)
 PGP000359 |
Liu Y et al. Cancer Med (2022)
 Gastrointestinal cancer Digestive System Carcinoma 106
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002747/ScoringFiles/PGS002747.txt.gz
PGS002248
(PRSice_asthma)
 PGP000275 |
Kothalawala DM et al. J Pers Med (2022)
 Childhood asthma childhood onset asthma 105
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002248/ScoringFiles/PGS002248.txt.gz
PGS004865
(PRS105_BC)
 PGP000612 |
Gao C et al. J Clin Oncol (2021)
 Breast cancer breast carcinoma 105
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004865/ScoringFiles/PGS004865.txt.gz
PGS004866
(PRS105_ERposBC)
 PGP000612 |
Gao C et al. J Clin Oncol (2021)
 ER-positive breast cancer estrogen-receptor positive breast cancer 105
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004866/ScoringFiles/PGS004866.txt.gz
PGS004867
(PRS105_ERnegBC)
 PGP000612 |
Gao C et al. J Clin Oncol (2021)
 ER-negative breast cancer estrogen-receptor negative breast cancer 105
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004867/ScoringFiles/PGS004867.txt.gz
PGS000049
(PRS103_PrCa)
 PGP000034 |
Lecarpentier J et al. J Clin Oncol (2017)
 Prostate cancer prostate carcinoma 103
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000049/ScoringFiles/PGS000049.txt.gz
PGS000065
(GLGC2017_LDL)
 PGP000046 |
Kuchenbaecker K et al. Nat Commun (2019)
 LDL cholesterol low density lipoprotein cholesterol measurement 103
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000065/ScoringFiles/PGS000065.txt.gz
PGS000074
(CC_Colorectal)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Colorectal cancer colorectal cancer 103
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000074/ScoringFiles/PGS000074.txt.gz
PGS000124
(IOP_AS)
 PGP000061 |
MacGregor S et al. Nat Genet (2018)
 Intraocular pressure intraocular pressure measurement 103
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000124/ScoringFiles/PGS000124.txt.gz
PGS000785
(CC_Colorectal_IV)
 PGP000186 |
Kachuri L et al. Nat Commun (2020)
 Colorectal cancer colorectal cancer 103
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000785/ScoringFiles/PGS000785.txt.gz
PGS004319
(GRS103_BMI)
 PGP000549 |
Fernández-Rhodes L et al. Psychosom Med (2023)
 Body mass index body mass index 103
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004319/ScoringFiles/PGS004319.txt.gz
PGS003350
(ALLGRS_TC)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 Total cholesterol total cholesterol measurement 102
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003350/ScoringFiles/PGS003350.txt.gz
PGS004599
(PRS102_Pca)
 PGP000577 |
Ruan X et al. J Clin Med (2023)
 Prostate cancer prostate carcinoma 102
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004599/ScoringFiles/PGS004599.txt.gz
PGS000066
(GLGC2017_TG)
 PGP000046 |
Kuchenbaecker K et al. Nat Commun (2019)
 Triglycerides (TG) triglyceride measurement 101
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000066/ScoringFiles/PGS000066.txt.gz
PGS000571
(PRSWEB_PHECODE185_C3-PROSTATE_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Prostate cancer prostate carcinoma 100
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000571/ScoringFiles/PGS000571.txt.gz
PGS003420
(PRS100_PRScs)
 PGP000431 |
Ko CL et al. J Transl Med (2022)
 Ankylosing spondylitis ankylosing spondylitis 100
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003420/ScoringFiles/PGS003420.txt.gz
PGS003423
(PRS100_Lassosum)
 PGP000431 |
Ko CL et al. J Transl Med (2022)
 Ankylosing spondylitis ankylosing spondylitis 100
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003423/ScoringFiles/PGS003423.txt.gz
PGS003424
(PRS100_LDpred2)
 PGP000431 |
Ko CL et al. J Transl Med (2022)
 Ankylosing spondylitis ankylosing spondylitis 100
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003424/ScoringFiles/PGS003424.txt.gz
PGS004272
(GenoBoost_inflammatory_bowel_disease_2)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Inflammatory bowel disease inflammatory bowel disease 100
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004272/ScoringFiles/PGS004272.txt.gz
PGS002921
(ExPRSweb_Estradiol_30800-raw_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estradiol estradiol measurement 98
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002921/ScoringFiles/PGS002921.txt.gz
PGS003705
(R_presubiculum_head_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right presubiculum head volume presubiculum volume 98
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003705/ScoringFiles/PGS003705.txt.gz
PGS000034
(GRS_BMI)
 PGP000021 |
Song M et al. Diabetes (2017)
 Adult body mass index (BMI) body mass index 97
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000034/ScoringFiles/PGS000034.txt.gz
PGS000338
(GRS97_AF)
 PGP000105 |
Kloosterman M et al. Eur J Heart Fail (2020)
 Atrial fibrillation atrial fibrillation 97
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000338/ScoringFiles/PGS000338.txt.gz
PGS000594
(PRSWEB_PHECODE187_C3-MALE-GENITAL_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Cancer of other male genital organs male reproductive organ cancer 97
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000594/ScoringFiles/PGS000594.txt.gz
PGS002251
(PRS97_BMI)
 PGP000278 |
Dashti HS et al. BMC Med (2022)
 Body mass index (BMI) body mass index 97
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002251/ScoringFiles/PGS002251.txt.gz
PGS003400
(PRS97_obesity)
 PGP000416 |
Robinson JR et al. Obesity (Silver Spring) (2022)
 Obesity obesity 97
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003400/ScoringFiles/PGS003400.txt.gz
PGS004917
(wGRS)
 PGP000648 |
Cui J et al. Arthritis Rheumatol (2020)
 Systemic lupus erythematosus systemic lupus erythematosus 97
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004917/ScoringFiles/PGS004917.txt.gz
PGS000195
(G-PROB_Raneg)
 PGP000081 |
Knevel R et al. Sci Transl Med (2020)
 Rheumatoid arthritis (CCP-negative) ACPA-negative rheumatoid arthritis 96
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000195/ScoringFiles/PGS000195.txt.gz
PGS001277
(GBE_HC203)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 PE +/- DVT pulmonary embolism,
deep vein thrombosis		 96
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001277/ScoringFiles/PGS001277.txt.gz
PGS001756
(GBE_INI25539)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA MD in tract superior thalamic radiation (R) neuroimaging measurement,
brain volume		 96
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001756/ScoringFiles/PGS001756.txt.gz
PGS000400
(PRSWEB_PHECODE172_C3-SKIN_P_5e-08_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Skin cancer skin carcinoma 95
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000400/ScoringFiles/PGS000400.txt.gz
PGS000720
(PRS_Colorectal)
 PGP000135 |
Jia G et al. JNCI Cancer Spectr (2020)
 Colorectal cancer colorectal cancer 95
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000720/ScoringFiles/PGS000720.txt.gz
PGS000734
(PRS95_CRC)
 PGP000142 |
Archambault AN et al. Gastroenterology (2019)
 Colorectal cancer colorectal cancer 95
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000734/ScoringFiles/PGS000734.txt.gz
PGS000765
(PRS_CRC95)
 PGP000170 |
Huyghe JR et al. Nat Genet (2018)
 Colorectal cancer colorectal cancer 95
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000765/ScoringFiles/PGS000765.txt.gz
PGS000771
(GRS95_SLEmain)
 PGP000178 |
Chen L et al. Hum Mol Genet (2020)
 Systemic lupus erythematosus systemic lupus erythematosus 95
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000771/ScoringFiles/PGS000771.txt.gz
PGS000772
(GRS95_SLEgen)
 PGP000178 |
Chen L et al. Hum Mol Genet (2020)
 Systemic lupus erythematosus systemic lupus erythematosus 95
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000772/ScoringFiles/PGS000772.txt.gz
PGS001885
(portability-PLR_960.2)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Allergy/adverse effect of penicillin drug allergy 95
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001885/ScoringFiles/PGS001885.txt.gz
PGS001279
(GBE_BIN_FC8006152)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 previously: Blood clot in the lung pulmonary embolism,
deep vein thrombosis		 94
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001279/ScoringFiles/PGS001279.txt.gz
PGS004900
(GRS_BMI_males)
 PGP000630 |
Wu Y et al. PLoS Genet (2020)
 Body mass index (BMI) body mass index 94
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004900/ScoringFiles/PGS004900.txt.gz
PGS004901
(GRS_BMI_females)
 PGP000630 |
Wu Y et al. PLoS Genet (2020)
 Body mass index (BMI) body mass index 94
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004901/ScoringFiles/PGS004901.txt.gz
PGS000861
(UACR)
 PGP000211 |
Aly DM et al. Nat Genet (2021)
 Urine Albumin-to-Creatinine ratio urinary albumin to creatinine ratio 93
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000861/ScoringFiles/PGS000861.txt.gz
PGS001293
(GBE_HC1123)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Other diseases of liver (time-to-event) liver disease 92
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001293/ScoringFiles/PGS001293.txt.gz
Showing 4301 to 4350 of 5134 rows