Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS005065
(Phe_427_21_ldpred_METAss_eurld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Atrial fibrillation (PheCode 427.21) atrial fibrillation 1,286,612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005065/ScoringFiles/PGS005065.txt.gz
PGS005066
(Phe_427_21_prscs_AFRss_afrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Atrial fibrillation (PheCode 427.21) atrial fibrillation 1,273,897
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005066/ScoringFiles/PGS005066.txt.gz
PGS005067
(Phe_427_21_prscs_EURss_eurld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Atrial fibrillation (PheCode 427.21) atrial fibrillation 1,273,897
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005067/ScoringFiles/PGS005067.txt.gz
PGS005068
(Phe_427_21_prscs_HISss_amrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Atrial fibrillation (PheCode 427.21) atrial fibrillation 1,273,897
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005068/ScoringFiles/PGS005068.txt.gz
PGS005069
(Phe_427_21_prscs_METAss_afrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Atrial fibrillation (PheCode 427.21) atrial fibrillation 1,273,897
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005069/ScoringFiles/PGS005069.txt.gz
PGS005070
(Phe_427_21_prscs_METAss_amrld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Atrial fibrillation (PheCode 427.21) atrial fibrillation 1,273,897
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005070/ScoringFiles/PGS005070.txt.gz
PGS005071
(Phe_427_21_prscs_METAss_eurld)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Atrial fibrillation (PheCode 427.21) atrial fibrillation 1,273,897
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005071/ScoringFiles/PGS005071.txt.gz
PGS005072
(Phe_427_21_prscsx_METAweight)
 PGP000679 |
Gunn S et al. HGG Adv (2024)
 Atrial fibrillation (PheCode 427.21) atrial fibrillation 1,273,891
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005072/ScoringFiles/PGS005072.txt.gz
PGS001263
(GBE_HC440)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Atrial flutter atrial flutter 2,087
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001263/ScoringFiles/PGS001263.txt.gz
PGS001018
(GBE_BIN_FC10006160)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Attending social / leisure activities (attend any of the followings in once a week or more often: sports club, gym, pub, social club, religious group, adult edication class, or other group activity) social interaction measurement 2,912
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001018/ScoringFiles/PGS001018.txt.gz
PGS001019
(GBE_BIN_FC20006160)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Attending social / leisure activities (regular attendance at a gym or sports club) social interaction measurement 11,361
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001019/ScoringFiles/PGS001019.txt.gz
PGS001020
(GBE_BIN_FC50006160)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Attending social / leisure activities (regular attendance at an adult education class) social interaction measurement 220
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001020/ScoringFiles/PGS001020.txt.gz
PGS003753
(PRS35445_ADHD)
 PGP000473 |
Sato JR et al. Genes Brain Behav (2023)
 Attention deficit hyperactivity disorder attention deficit hyperactivity disorder 35,445
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003753/ScoringFiles/PGS003753.txt.gz
PGS002746
(PRS_ADHD)
 PGP000358 |
Lahey BB et al. J Psychiatr Res (2022)
 Attention-deficit hyperactivity disorder attention deficit hyperactivity disorder 513,659
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002746/ScoringFiles/PGS002746.txt.gz
PGS000327
(ASD2019)
 PGP000098 |
Grove J et al. Nat Genet (2019)
 Autism spectrum disorder autism spectrum disorder 35,087
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000327/ScoringFiles/PGS000327.txt.gz
PGS002790
(ASD_SDPR)
 PGP000370 |
Gui Y et al. Transl Psychiatry (2022)
 Autism spectrum disorder autism spectrum disorder 916,713
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002790/ScoringFiles/PGS002790.txt.gz
PGS004239
(PRS14AAD)
 PGP000538 |
Aranda-Guillén M et al. J Intern Med (2023)
 Autoimmune Addison's disease chronic primary adrenal insufficiency 14
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004239/ScoringFiles/PGS004239.txt.gz
PGS002312
(disease_AID_ALL.BOLT-LMM)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 1,109,311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002312/ScoringFiles/PGS002312.txt.gz
PGS002359
(disease_AID_ALL.BOLT-LMM-BBJ)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 920,927
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002359/ScoringFiles/PGS002359.txt.gz
PGS002384
(disease_AID_ALL.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 2,563
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002384/ScoringFiles/PGS002384.txt.gz
PGS002433
(disease_AID_ALL.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 13,075
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002433/ScoringFiles/PGS002433.txt.gz
PGS002482
(disease_AID_ALL.P+T.0.01)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 88,404
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002482/ScoringFiles/PGS002482.txt.gz
PGS002531
(disease_AID_ALL.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 382
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002531/ScoringFiles/PGS002531.txt.gz
PGS002580
(disease_AID_ALL.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 206
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002580/ScoringFiles/PGS002580.txt.gz
PGS002629
(disease_AID_ALL.PolyFun-pred)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 159,127
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002629/ScoringFiles/PGS002629.txt.gz
PGS002678
(disease_AID_ALL.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 923,726
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002678/ScoringFiles/PGS002678.txt.gz
PGS001375
(GBE_INI22426)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Average heart rate heart rate 243
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001375/ScoringFiles/PGS001375.txt.gz
PGS001376
(GBE_INI21044)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Average number of times bowels opened per day bowel opening frequency 845
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001376/ScoringFiles/PGS001376.txt.gz
PGS001931
(portability-PLR_income)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Average total household income before tax household income 41,836
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001931/ScoringFiles/PGS001931.txt.gz
PGS002148
(portability-ldpred2_income)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Average total household income before tax household income 932,197
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002148/ScoringFiles/PGS002148.txt.gz
PGS003516
(cont-decay-income)
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Average total household income before tax household income 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003516/ScoringFiles/PGS003516.txt.gz
PGS001088
(GBE_INI1588)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Average weekly alcohol consumption (beer and cider) alcohol consumption quality 2,842
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001088/ScoringFiles/PGS001088.txt.gz
PGS001890
(portability-PLR_avMSE)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 avMSE visual acuity measurement 44,864
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001890/ScoringFiles/PGS001890.txt.gz
PGS002103
(portability-ldpred2_avMSE)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 avMSE visual acuity measurement 833,170
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002103/ScoringFiles/PGS002103.txt.gz
PGS003493
(cont-decay-avMSE)
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 avMSE visual acuity measurement 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003493/ScoringFiles/PGS003493.txt.gz
PGS002314
(body_BALDING1.BOLT-LMM)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Balding Type 1 balding measurement 1,109,311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002314/ScoringFiles/PGS002314.txt.gz
PGS002386
(body_BALDING1.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Balding Type 1 balding measurement 7,823
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002386/ScoringFiles/PGS002386.txt.gz
PGS002435
(body_BALDING1.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Balding Type 1 balding measurement 21,564
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002435/ScoringFiles/PGS002435.txt.gz
PGS002484
(body_BALDING1.P+T.0.01)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Balding Type 1 balding measurement 106,858
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002484/ScoringFiles/PGS002484.txt.gz
PGS002533
(body_BALDING1.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Balding Type 1 balding measurement 2,899
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002533/ScoringFiles/PGS002533.txt.gz
PGS002582
(body_BALDING1.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Balding Type 1 balding measurement 1,998
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002582/ScoringFiles/PGS002582.txt.gz
PGS002631
(body_BALDING1.PolyFun-pred)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Balding Type 1 balding measurement 877,406
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002631/ScoringFiles/PGS002631.txt.gz
PGS002680
(body_BALDING1.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Balding Type 1 balding measurement 965,079
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002680/ScoringFiles/PGS002680.txt.gz
PGS000119
(BCC32)
 PGP000055 |
Fritsche LG et al. PLoS Genet (2019)
 Basal cell carcinoma basal cell carcinoma 32
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000119/ScoringFiles/PGS000119.txt.gz
PGS000445
(PRSWEB_PHECODE172.21_20001-1061_P_5e-08_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Basal cell carcinoma basal cell carcinoma 19
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000445/ScoringFiles/PGS000445.txt.gz
PGS000446
(PRSWEB_PHECODE172.21_20001-1061_PRS-CS_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Basal cell carcinoma basal cell carcinoma 1,111,490
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000446/ScoringFiles/PGS000446.txt.gz
PGS000447
(PRSWEB_PHECODE172.21_20001-1061_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Basal cell carcinoma basal cell carcinoma 72
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000447/ScoringFiles/PGS000447.txt.gz
PGS000448
(PRSWEB_PHECODE172.21_20001-1061_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Basal cell carcinoma basal cell carcinoma 183
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000448/ScoringFiles/PGS000448.txt.gz
PGS000449
(PRSWEB_PHECODE172.21_20001-1073_PRS-CS_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Basal cell carcinoma basal cell carcinoma 1,073,162
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000449/ScoringFiles/PGS000449.txt.gz
PGS000450
(PRSWEB_PHECODE172.21_20001-1073_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Basal cell carcinoma basal cell carcinoma 8
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000450/ScoringFiles/PGS000450.txt.gz
Showing 401 to 450 of 5134 rows