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PGS Catalog
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Polygenic Scores (PGS)
Polygenic Scores (PGS)
Filter PGS by Participant Ancestry
Individuals included in:
Any Stage [G, D, E]
All Stages combined [G + D + E]
Development [G, D]
- GWAS [G]
- Score development [D]
PGS Evaluation [E]
G
- Source of Variant Associations (
G
WAS)
D
- Score
D
evelopment/Training
E
- PGS
E
valuation
List of ancestries includes:
--
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Display options:
Show European ancestry data
Show
only
Multi-ancestry data
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name
PGS Publication ID
(PGP)
Reported Trait
Mapped Trait(s)
(Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File
(FTP Link)
PGS004795
(Melanoma_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Melanoma
melanoma
796,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004795/ScoringFiles/PGS004795.txt.gz
PGS004796
(Melanoma_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Melanoma
melanoma
988,379
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004796/ScoringFiles/PGS004796.txt.gz
PGS004797
(migraine_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Migraine
migraine disorder
23
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004797/ScoringFiles/PGS004797.txt.gz
PGS004798
(migraine_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Migraine
migraine disorder
3,984,158
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004798/ScoringFiles/PGS004798.txt.gz
PGS004799
(migraine_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Migraine
migraine disorder
4,319,950
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004799/ScoringFiles/PGS004799.txt.gz
PGS004800
(migraine_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Migraine
migraine disorder
2,968,987
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004800/ScoringFiles/PGS004800.txt.gz
PGS004801
(Monocytes_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Monocyte count
monocyte count
1,099,478
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004801/ScoringFiles/PGS004801.txt.gz
PGS004802
(Monocytes_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Monocyte count
monocyte count
2,743,298
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004802/ScoringFiles/PGS004802.txt.gz
PGS004803
(Monocytes_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Monocyte count
monocyte count
3,020,361
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004803/ScoringFiles/PGS004803.txt.gz
PGS004804
(Monocytes_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Monocyte count
monocyte count
2,743,298
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004804/ScoringFiles/PGS004804.txt.gz
PGS004805
(Neutrophils_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Neutrophil count
neutrophil count
595,488
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004805/ScoringFiles/PGS004805.txt.gz
PGS004806
(Neutrophils_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Neutrophil count
neutrophil count
4,190,918
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004806/ScoringFiles/PGS004806.txt.gz
PGS004807
(Neutrophils_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Neutrophil count
neutrophil count
3,498,605
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004807/ScoringFiles/PGS004807.txt.gz
PGS004808
(Neutrophils_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Neutrophil count
neutrophil count
1,877,161
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004808/ScoringFiles/PGS004808.txt.gz
PGS004809
(osteoporosis_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Osteoporosis
osteoporosis
863,731
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004809/ScoringFiles/PGS004809.txt.gz
PGS004810
(osteoporosis_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Osteoporosis
osteoporosis
1,876,917
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004810/ScoringFiles/PGS004810.txt.gz
PGS004811
(Platelets_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Platelet count
platelet count
1,147,733
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004811/ScoringFiles/PGS004811.txt.gz
PGS004812
(Platelets_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Platelet count
platelet count
6,146,883
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004812/ScoringFiles/PGS004812.txt.gz
PGS004813
(Platelets_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Platelet count
platelet count
1,793,041
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004813/ScoringFiles/PGS004813.txt.gz
PGS004814
(Platelets_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Platelet count
platelet count
6,146,883
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004814/ScoringFiles/PGS004814.txt.gz
PGS004815
(prostate_cancer_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Prostate cancer
prostate carcinoma
922,102
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004815/ScoringFiles/PGS004815.txt.gz
PGS004816
(prostate_cancer_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Prostate cancer
prostate carcinoma
922,104
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004816/ScoringFiles/PGS004816.txt.gz
PGS004817
(RA_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Rheumatoid Arthritis
rheumatoid arthritis
786,048
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004817/ScoringFiles/PGS004817.txt.gz
PGS004818
(RA_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Rheumatoid Arthritis
rheumatoid arthritis
6,580,837
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004818/ScoringFiles/PGS004818.txt.gz
PGS004819
(RA_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Rheumatoid Arthritis
rheumatoid arthritis
2,624,228
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004819/ScoringFiles/PGS004819.txt.gz
PGS004820
(RA_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Rheumatoid Arthritis
rheumatoid arthritis
6,580,837
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004820/ScoringFiles/PGS004820.txt.gz
PGS004821
(RBC_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Red blood cell count
erythrocyte count
1,160,061
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004821/ScoringFiles/PGS004821.txt.gz
PGS004822
(RBC_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Red blood cell count
erythrocyte count
1,874,761
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004822/ScoringFiles/PGS004822.txt.gz
PGS004823
(RBC_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Red blood cell count
erythrocyte count
4,047,636
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004823/ScoringFiles/PGS004823.txt.gz
PGS004824
(RBC_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Red blood cell count
erythrocyte count
1,542,933
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004824/ScoringFiles/PGS004824.txt.gz
PGS004825
(RDW_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Red cell distribution width
Red cell distribution width
1,082,665
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004825/ScoringFiles/PGS004825.txt.gz
PGS004826
(RDW_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Red cell distribution width
Red cell distribution width
5,175,389
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004826/ScoringFiles/PGS004826.txt.gz
PGS004827
(RDW_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Red cell distribution width
Red cell distribution width
4,698,860
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004827/ScoringFiles/PGS004827.txt.gz
PGS004828
(RDW_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Red cell distribution width
Red cell distribution width
5,175,389
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004828/ScoringFiles/PGS004828.txt.gz
PGS004829
(sbp_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Systolic blood pressure
systolic blood pressure
1,194,211
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004829/ScoringFiles/PGS004829.txt.gz
PGS004830
(sbp_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Systolic blood pressure
systolic blood pressure
4,805,129
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004830/ScoringFiles/PGS004830.txt.gz
PGS004831
(sbp_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Systolic blood pressure
systolic blood pressure
3,827,774
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004831/ScoringFiles/PGS004831.txt.gz
PGS004832
(sbp_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Systolic blood pressure
systolic blood pressure
6,013,177
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004832/ScoringFiles/PGS004832.txt.gz
PGS004833
(skin_cancer_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Skin cancer
melanoma
807,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004833/ScoringFiles/PGS004833.txt.gz
PGS004834
(skin_cancer_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Skin cancer
melanoma
1,271,902
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004834/ScoringFiles/PGS004834.txt.gz
PGS004835
(stroke_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Stroke
stroke
2,263,784
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004835/ScoringFiles/PGS004835.txt.gz
PGS004836
(stroke_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Stroke
stroke
5,644,266
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004836/ScoringFiles/PGS004836.txt.gz
PGS004837
(t2d_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
3,306,136
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004837/ScoringFiles/PGS004837.txt.gz
PGS004838
(t2d_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
6,586,458
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004838/ScoringFiles/PGS004838.txt.gz
PGS004839
(t2d_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
4,594,694
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004839/ScoringFiles/PGS004839.txt.gz
PGS004840
(t2d_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
6,586,458
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004840/ScoringFiles/PGS004840.txt.gz
PGS004841
(tc_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Total cholesterol
total cholesterol measurement
1,051,726
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004841/ScoringFiles/PGS004841.txt.gz
PGS004842
(tc_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Total cholesterol
total cholesterol measurement
6,439,132
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004842/ScoringFiles/PGS004842.txt.gz
PGS004843
(tc_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Total cholesterol
total cholesterol measurement
4,136,795
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004843/ScoringFiles/PGS004843.txt.gz
PGS004844
(tc_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Total cholesterol
total cholesterol measurement
6,149,012
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004844/ScoringFiles/PGS004844.txt.gz
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