Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS003162
(ExPRSweb_VitB12_100013-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin B12 vitamin B12 measurement 10,318,272
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003162/ScoringFiles/PGS003162.txt.gz
PGS003157
(ExPRSweb_VitB12_100013-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin B12 vitamin B12 measurement 10,318,270
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003157/ScoringFiles/PGS003157.txt.gz
PGS003177
(ExPRSweb_VitD_100021-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D measurement 10,318,270
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003177/ScoringFiles/PGS003177.txt.gz
PGS003182
(ExPRSweb_VitD_100021-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D measurement 10,318,270
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003182/ScoringFiles/PGS003182.txt.gz
PGS003192
(ExPRSweb_VitD_30890-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D measurement 10,313,259
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003192/ScoringFiles/PGS003192.txt.gz
PGS003197
(ExPRSweb_VitD_30890-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D measurement 10,313,258
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003197/ScoringFiles/PGS003197.txt.gz
PGS002867
(ExPRSweb_CRP_30710-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 C-reactive protein C-reactive protein measurement 10,306,310
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002867/ScoringFiles/PGS002867.txt.gz
PGS002872
(ExPRSweb_CRP_30710-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 C-reactive protein C-reactive protein measurement 10,306,271
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002872/ScoringFiles/PGS002872.txt.gz
PGS003092
(ExPRSweb_T2D_2443_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 10,304,000
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003092/ScoringFiles/PGS003092.txt.gz
PGS002972
(ExPRSweb_Height_50-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Height body height 10,297,262
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002972/ScoringFiles/PGS002972.txt.gz
PGS002967
(ExPRSweb_Height_50-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Height body height 10,297,259
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002967/ScoringFiles/PGS002967.txt.gz
PGS002922
(ExPRSweb_Estradiol_30800-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estradiol estradiol measurement 10,287,670
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002922/ScoringFiles/PGS002922.txt.gz
PGS002917
(ExPRSweb_Estradiol_30800-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estradiol estradiol measurement 10,287,664
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002917/ScoringFiles/PGS002917.txt.gz
PGS003147
(ExPRSweb_TG_30870-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Triglycerides triglyceride measurement 8,924,773
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003147/ScoringFiles/PGS003147.txt.gz
PGS003152
(ExPRSweb_TG_30870-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Triglycerides triglyceride measurement 8,924,752
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003152/ScoringFiles/PGS003152.txt.gz
PGS003037
(ExPRSweb_LDL_30780-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 LDL cholesterol low density lipoprotein cholesterol measurement 8,918,470
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003037/ScoringFiles/PGS003037.txt.gz
PGS002912
(ExPRSweb_Drinking_20117-2_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Drinking status alcohol drinking 8,598,752
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002912/ScoringFiles/PGS002912.txt.gz
PGS003322
(ExPRSweb_Insomnia_1160_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Insomnia insomnia 8,590,163
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003322/ScoringFiles/PGS003322.txt.gz
PGS002997
(ExPRSweb_Hypertension_20002-1065_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Hypertension hypertension 7,601,215
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002997/ScoringFiles/PGS002997.txt.gz
PGS003002
(ExPRSweb_Hypertension_20002-1072_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Hypertension hypertension 7,601,215
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003002/ScoringFiles/PGS003002.txt.gz
PGS003212
(ExPRSweb_SleepApnea_G6-SLEEPAPNO_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Sleep apnea sleep apnea 7,601,206
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003212/ScoringFiles/PGS003212.txt.gz
PGS002937
(ExPRSweb_Glucose_30740-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Glucose glucose measurement 7,600,988
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002937/ScoringFiles/PGS002937.txt.gz
PGS002942
(ExPRSweb_Glucose_30740-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Glucose glucose measurement 7,600,988
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002942/ScoringFiles/PGS002942.txt.gz
PGS003072
(ExPRSweb_SBP_4080-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Systolic blood pressure systolic blood pressure 7,477,086
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003072/ScoringFiles/PGS003072.txt.gz
PGS003077
(ExPRSweb_SBP_4080-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Systolic blood pressure systolic blood pressure 7,477,072
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003077/ScoringFiles/PGS003077.txt.gz
PGS002892
(ExPRSweb_DBP_4079-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Diastolic blood pressure diastolic blood pressure 7,477,069
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002892/ScoringFiles/PGS002892.txt.gz
PGS003137
(ExPRSweb_TC_30690-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Total cholesterol total cholesterol measurement 7,459,292
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003137/ScoringFiles/PGS003137.txt.gz
PGS003142
(ExPRSweb_TC_30690-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Total cholesterol total cholesterol measurement 7,459,288
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003142/ScoringFiles/PGS003142.txt.gz
PGS003032
(ExPRSweb_LDL_30780-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 LDL cholesterol low density lipoprotein cholesterol measurement 7,457,930
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003032/ScoringFiles/PGS003032.txt.gz
PGS003282
(ExPRSweb_CysC_30720-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Cystatin C cystatin C measurement 7,451,904
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003282/ScoringFiles/PGS003282.txt.gz
PGS003242
(ExPRSweb_Creatine_30700-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine measurement 7,451,744
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003242/ScoringFiles/PGS003242.txt.gz
PGS003287
(ExPRSweb_CysC_30720-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Cystatin C cystatin C measurement 7,451,726
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003287/ScoringFiles/PGS003287.txt.gz
PGS003247
(ExPRSweb_Creatine_30700-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine measurement 7,451,626
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003247/ScoringFiles/PGS003247.txt.gz
PGS002957
(ExPRSweb_HDL_30760-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 HDL cholesterol high density lipoprotein cholesterol measurement 7,449,065
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002957/ScoringFiles/PGS002957.txt.gz
PGS002962
(ExPRSweb_HDL_30760-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 HDL cholesterol high density lipoprotein cholesterol measurement 7,449,036
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002962/ScoringFiles/PGS002962.txt.gz
PGS002853
(ExPRSweb_BMI_23104-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Body mass index (BMI) body mass index 7,446,664
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002853/ScoringFiles/PGS002853.txt.gz
PGS002858
(ExPRSweb_BMI_23104-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Body mass index (BMI) body mass index 7,446,652
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002858/ScoringFiles/PGS002858.txt.gz
PGS002843
(ExPRSweb_BMI_21001-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Body mass index (BMI) body mass index 7,444,639
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002843/ScoringFiles/PGS002843.txt.gz
PGS002848
(ExPRSweb_BMI_21001-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Body mass index (BMI) body mass index 7,444,629
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002848/ScoringFiles/PGS002848.txt.gz
PGS003057
(ExPRSweb_Smoking_20160_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Smoking status smoking status measurement 7,433,494
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003057/ScoringFiles/PGS003057.txt.gz
PGS002897
(ExPRSweb_DBP_4079-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Diastolic blood pressure diastolic blood pressure 7,259,551
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002897/ScoringFiles/PGS002897.txt.gz
PGS002902
(ExPRSweb_DBP_94-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Diastolic blood pressure diastolic blood pressure 7,218,263
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002902/ScoringFiles/PGS002902.txt.gz
PGS003017
(ExPRSweb_Hypertension_I10_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Hypertension hypertension 7,094,727
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003017/ScoringFiles/PGS003017.txt.gz
PGS004744
(cad_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Coronary artery disease coronary artery disease 7,082,943
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004744/ScoringFiles/PGS004744.txt.gz
PGS003047
(ExPRSweb_Smoking_20116-1_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Smoking status smoking status measurement 7,075,957
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003047/ScoringFiles/PGS003047.txt.gz
PGS003232
(ExPRSweb_Creatine_30510-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine measurement 7,062,258
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003232/ScoringFiles/PGS003232.txt.gz
PGS003237
(ExPRSweb_Creatine_30510-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine measurement 7,021,804
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003237/ScoringFiles/PGS003237.txt.gz
PGS000014
(GPS_T2D)
 PGP000006 |
Khera AV et al. Nat Genet (2018)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 6,917,436
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000014/ScoringFiles/PGS000014.txt.gz - Check Terms/Licenses
PGS000017
(GPS_IBD)
 PGP000006 |
Khera AV et al. Nat Genet (2018)
 Inflammatory bowel disease inflammatory bowel disease 6,907,112
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000017/ScoringFiles/PGS000017.txt.gz - Check Terms/Licenses
PGS003406
(1_withUKB_sexAll_metaGRS.weights)
 PGP000423 |
Bakker MK et al. Stroke (2023)
 Intracranial aneurysm brain aneurysm 6,852,195
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003406/ScoringFiles/PGS003406.txt.gz
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