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PGS Catalog
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Polygenic Scores (PGS)
Polygenic Scores (PGS)
Filter PGS by Participant Ancestry
Individuals included in:
Any Stage [G, D, E]
All Stages combined [G + D + E]
Development [G, D]
- GWAS [G]
- Score development [D]
PGS Evaluation [E]
G
- Source of Variant Associations (
G
WAS)
D
- Score
D
evelopment/Training
E
- PGS
E
valuation
List of ancestries includes:
--
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Display options:
Show European ancestry data
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Multi-ancestry data
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name
PGS Publication ID
(PGP)
Reported Trait
Mapped Trait(s)
(Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File
(FTP Link)
PGS000923
(GBE_HC639)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Sarcoidosis (time-to-event)
sarcoidosis
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000923/ScoringFiles/PGS000923.txt.gz
PGS001029
(GBE_HC866)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Other disorders of cornea (time-to-event)
corneal disease
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001029/ScoringFiles/PGS001029.txt.gz
PGS001824
(portability-PLR_277.4)
PGP000263
|
Privé F
et al.
Am J Hum Genet (2022)
Disorders of bilirubin excretion
Disorder of bilirubin metabolism and excretion
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001824/ScoringFiles/PGS001824.txt.gz
PGS002261
(PRS22_NB)
PGP000287
|
Testori A
et al.
Cancer Epidemiol Biomarkers Prev (2022)
Neuroblastoma
neuroblastoma
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002261/ScoringFiles/PGS002261.txt.gz
PGS002279
(GRS22_rLVEF)
PGP000307
|
Forrest IS
et al.
Eur J Heart Fail (2022)
Reduced left ventricular ejection fraction
left ventricular ejection fraction measurement
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002279/ScoringFiles/PGS002279.txt.gz
PGS002301
(PRS22_melanoma)
PGP000328
|
Choi J
et al.
Int J Cancer (2020)
Melanoma
melanoma
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002301/ScoringFiles/PGS002301.txt.gz
PGS002740
(PRS22_PC)
PGP000347
|
Yuan C
et al.
Ann Oncol (2022)
Pancreatic cancer
pancreatic carcinoma
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002740/ScoringFiles/PGS002740.txt.gz
PGS003201
(ExPRSweb_VitD_29343764-GCST005367_PLINK_UKB_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Vitamin D
vitamin D measurement
22
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003201/ScoringFiles/PGS003201.txt.gz
PGS003654
(R_hippocampal_tail_UKBB_EUR_GWAS)
PGP000464
|
Liu N
et al.
Nat Genet (2023)
Right hippocampal tail volume
hippocampal tail volume
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003654/ScoringFiles/PGS003654.txt.gz
PGS003754
(PRS22_OCstepwise)
PGP000474
|
Hurwitz LM
et al.
JAMA Netw Open (2023)
Nonmucinous Epithelial Ovarian Cancer
ovarian carcinoma
22
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003754/ScoringFiles/PGS003754.txt.gz
PGS000056
(PD_PRS)
PGP000041
|
Paul KC
et al.
JAMA Neurol (2018)
Parkinson's disease
Parkinson disease
23
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000056/ScoringFiles/PGS000056.txt.gz
PGS000458
(PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_PT_MGI_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Basal cell carcinoma
basal cell carcinoma
23
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000458/ScoringFiles/PGS000458.txt.gz
PGS000618
(PRSWEB_PHECODE191.1_GWAS-Catalog-r2019-05-03-X191.1_P_5e-08_UKB_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Brain and nervous system cancer
central nervous system cancer
23
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000618/ScoringFiles/PGS000618.txt.gz
PGS000764
(PRS23_POAG)
PGP000169
|
Cole BS
et al.
Invest Ophthalmol Vis Sci (2021)
Primary-open angle glaucoma
open-angle glaucoma
23
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000764/ScoringFiles/PGS000764.txt.gz
PGS000823
(GRS23_AD)
PGP000207
|
van der Lee SJ
et al.
Lancet Neurol (2018)
Alzheimer's disease
Alzheimer disease
23
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000823/ScoringFiles/PGS000823.txt.gz
PGS002281
(PRS23_MM)
PGP000310
|
Canzian F
et al.
Eur J Hum Genet (2021)
Multiple myeloma
multiple myeloma
23
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002281/ScoringFiles/PGS002281.txt.gz
PGS002289
(GRS23_AD)
PGP000316
|
Zimmerman SC
et al.
JAMA Netw Open (2022)
Late-onset Alzheimer's disease
late-onset Alzheimer's disease
23
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002289/ScoringFiles/PGS002289.txt.gz
PGS002306
(PRS23_MM)
PGP000328
|
Choi J
et al.
Int J Cancer (2020)
Multiple myeloma
multiple myeloma
23
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002306/ScoringFiles/PGS002306.txt.gz
PGS003200
(ExPRSweb_VitD_29343764-GCST005367_PT_UKB_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Vitamin D
vitamin D measurement
23
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003200/ScoringFiles/PGS003200.txt.gz
PGS003437
(PRS23_TC)
PGP000439
|
Feng X
et al.
JAMA Netw Open (2022)
Thyroid cancer
thyroid carcinoma
23
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003437/ScoringFiles/PGS003437.txt.gz
PGS004587
(PRS23_AD)
PGP000566
|
Gu X
et al.
Ecotoxicol Environ Saf (2023)
Atopic dermatitis
atopic eczema
23
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004587/ScoringFiles/PGS004587.txt.gz
PGS004695
(PRS23_IPF)
PGP000598
|
Wang X
et al.
Chemosphere (2023)
Idiopathic pulmonary fibrosis
idiopathic pulmonary fibrosis
23
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004695/ScoringFiles/PGS004695.txt.gz
PGS004797
(migraine_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Migraine
migraine disorder
23
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004797/ScoringFiles/PGS004797.txt.gz
PGS000079
(CC_Melanoma)
PGP000050
|
Graff RE
et al.
Nat Commun (2021)
Melanoma
melanoma
24
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000079/ScoringFiles/PGS000079.txt.gz
PGS000459
(PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_PT_UKB_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Basal cell carcinoma
basal cell carcinoma
24
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000459/ScoringFiles/PGS000459.txt.gz
PGS000790
(CC_Melanoma_IV)
PGP000186
|
Kachuri L
et al.
Nat Commun (2020)
Melanoma
melanoma
24
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000790/ScoringFiles/PGS000790.txt.gz
PGS001299
(GBE_cancer1041)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Cervical cancer
cervical carcinoma
24
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001299/ScoringFiles/PGS001299.txt.gz
PGS002729
(PRS_knee)
PGP000336
|
Sedaghati-Khayat B
et al.
Arthritis Rheumatol (2022)
Knee osteoarthritis
osteoarthritis, knee
24
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002729/ScoringFiles/PGS002729.txt.gz
PGS002736
(PRS24)
PGP000344
|
Bafligil C
et al.
Genet Med (2022)
Endometrial cancer
endometrial carcinoma
24
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002736/ScoringFiles/PGS002736.txt.gz
PGS003020
(ExPRSweb_Hypertension_finngen-R4-FG_PT_UKB_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Hypertension
hypertension
24
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003020/ScoringFiles/PGS003020.txt.gz
PGS003021
(ExPRSweb_Hypertension_finngen-R4-FG_PLINK_UKB_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Hypertension
hypertension
24
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003021/ScoringFiles/PGS003021.txt.gz
PGS003450
(PRS24_MM)
PGP000448
|
Berndt SI
et al.
Leukemia (2022)
Multiple myeloma
multiple myeloma
24
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003450/ScoringFiles/PGS003450.txt.gz
PGS000484
(PRSWEB_PHECODE174.1_D05_PT_MGI_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Breast cancer (female)
breast carcinoma
25
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000484/ScoringFiles/PGS000484.txt.gz
PGS001281
(GBE_HC86)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Migraine
migraine disorder
25
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001281/ScoringFiles/PGS001281.txt.gz
PGS001773
(PRS_atopicDermatitis)
PGP000253
|
Simard M
et al.
J Allergy Clin Immunol (2020)
Moderate-to-severe atopic dermatitis
atopic eczema
25
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001773/ScoringFiles/PGS001773.txt.gz
PGS002827
(ExPRSweb_Alcohol_20403_PLINK_MGI_20211120)
PGP000393
|
Ma Y
et al.
Am J Hum Genet (2022)
Alcohol consumption
alcohol consumption measurement
25
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002827/ScoringFiles/PGS002827.txt.gz
PGS003413
(rvPRS_IOP)
PGP000426
|
Gao XR
et al.
Nat Commun (2022)
Intraocular pressure
intraocular pressure measurement
25
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003413/ScoringFiles/PGS003413.txt.gz
PGS003487
(PRS_IL4)
PGP000451
|
Al-Janabi A
et al.
J Invest Dermatol (2023)
General atopic disease (IL-4 related variants)
allergic disease
25
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003487/ScoringFiles/PGS003487.txt.gz
PGS003652
(R_hippocampal_tail_trans_ancestry_meta_analysis)
PGP000464
|
Liu N
et al.
Nat Genet (2023)
Right hippocampal tail volume
hippocampal tail volume
25
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003652/ScoringFiles/PGS003652.txt.gz
PGS003796
(LDL_SAS_CT)
PGP000489
|
Zhang H
et al.
Nat Genet (2023)
LDL cholesterol
low density lipoprotein cholesterol measurement
25
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003796/ScoringFiles/PGS003796.txt.gz
PGS004249
(PRS25_ovary)
PGP000542
|
Kim ES
et al.
NPJ Precis Oncol (2023)
Ovarian cancer
ovarian carcinoma
25
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004249/ScoringFiles/PGS004249.txt.gz
PGS000114
(GRS-JIA-20)
PGP000052
|
Cánovas R
et al.
Ann Rheum Dis (2020)
Juvenile Idiopathic Arthritis
juvenile idiopathic arthritis
26
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000114/ScoringFiles/PGS000114.txt.gz
PGS000736
(PRS_QRS)
PGP000144
|
Tadros R
et al.
Eur Heart J (2019)
QRS duration
QRS duration
26
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000736/ScoringFiles/PGS000736.txt.gz
PGS000945
(GBE_HC710)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Dementia in Alzheimer's disease (time-to-event)
dementia
,
Alzheimer disease
26
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000945/ScoringFiles/PGS000945.txt.gz
PGS001371
(GBE_INI2976)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Age diabetes diagnosed
diabetes mellitus
,
age at diagnosis
26
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001371/ScoringFiles/PGS001371.txt.gz
PGS001413
(GBE_INI22423)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
LV stroke volume
left ventricular stroke volume measurement
26
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001413/ScoringFiles/PGS001413.txt.gz
PGS003737
(PRS26_BrC)
PGP000470
|
Xin J
et al.
EBioMedicine (2023)
Brain cancer
brain neoplasm
26
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003737/ScoringFiles/PGS003737.txt.gz
PGS000010
(GRS27)
PGP000003
|
Mega JL
et al.
Lancet (2015)
Coronary heart disease
coronary artery disease
27
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000010/ScoringFiles/PGS000010.txt.gz
PGS000146
(CRC_GRS_27)
PGP000069
|
Hsu L
et al.
Gastroenterology (2015)
Colorectal cancer
colorectal cancer
27
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000146/ScoringFiles/PGS000146.txt.gz
PGS000372
(PRSWEB_PHECODE153_GWAS-Catalog-r2019-05-03-X153_PT_UKB_20200608)
PGP000118
|
Fritsche LG
et al.
Am J Hum Genet (2020)
Colorectal cancer
colorectal cancer
27
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000372/ScoringFiles/PGS000372.txt.gz
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