Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS001810
(portability-PLR_200.1)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Polycythemia vera polycythemia vera 67
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001810/ScoringFiles/PGS001810.txt.gz
PGS002792
(PRS67_Pca)
 PGP000371 |
Ruan X et al. Prostate (2022)
 Prostate cancer prostate carcinoma 67
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002792/ScoringFiles/PGS002792.txt.gz
PGS002797
(GRS67_His)
 PGP000379 |
Shi Z et al. Eur Urol Open Sci (2022)
 Prostate cancer prostate carcinoma 67
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002797/ScoringFiles/PGS002797.txt.gz
PGS004243
(PRS67_colorectum)
 PGP000542 |
Kim ES et al. NPJ Precis Oncol (2023)
 Colorectal cancer colorectal carcinoma 67
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004243/ScoringFiles/PGS004243.txt.gz
PGS000044
(PrCa66)
 PGP000031 |
Pashayan N et al. Br J Cancer (2015)
 Prostate cancer prostate carcinoma 66
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000044/ScoringFiles/PGS000044.txt.gz
PGS000153
(cGRS_Breast)
 PGP000075 |
Shi Z et al. Cancer Med (2019)
 Breast cancer breast carcinoma 66
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000153/ScoringFiles/PGS000153.txt.gz
PGS000833
(T1D)
 PGP000211 |
Aly DM et al. Nat Genet (2021)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 66
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000833/ScoringFiles/PGS000833.txt.gz
PGS000891
(GLGC_2021_EAS_LDL_PRS_weights_PT)
 PGP000230 |
Graham SE et al. Nature (2021)
 LDL cholesterol low density lipoprotein cholesterol measurement 66
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000891/ScoringFiles/PGS000891.txt.gz
PGS001407
(GBE_INI23022)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 HTLV-1 gag antigen for Human T-Lymphotropic Virus 1 blood protein measurement 66
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001407/ScoringFiles/PGS001407.txt.gz
PGS002528
(repro_NumberChildrenEverBorn_Pooled.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Number of children ever born number of children ever born measurement 66
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002528/ScoringFiles/PGS002528.txt.gz
PGS003339
(CVGRS_LDL)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 LDL cholesterol low density lipoprotein cholesterol measurement 65
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003339/ScoringFiles/PGS003339.txt.gz
PGS003340
(CVGRS_TG)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 Triglyceride level triglyceride measurement 65
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003340/ScoringFiles/PGS003340.txt.gz
PGS004247
(PRS65_melanoma)
 PGP000542 |
Kim ES et al. NPJ Precis Oncol (2023)
 Melanoma cutaneous melanoma 65
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004247/ScoringFiles/PGS004247.txt.gz
PGS004596
(PRS64_CHD)
 PGP000576 |
Peng H et al. Nutrients (2023)
 Coronary heart disease coronary artery disease 64
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004596/ScoringFiles/PGS004596.txt.gz
PGS000148
(CRC63)
 PGP000071 |
Jeon J et al. Gastroenterology (2018)
 Colorectal cancer colorectal cancer 63
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000148/ScoringFiles/PGS000148.txt.gz
PGS000437
(PRSWEB_PHECODE172.2_C44_P_5e-08_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Other non-epithelial skin cancer skin cancer 63
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000437/ScoringFiles/PGS000437.txt.gz
PGS000843
(WHRadjBMI)
 PGP000211 |
Aly DM et al. Nat Genet (2021)
 WHR adjusted for BMI BMI-adjusted waist-hip ratio 63
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000843/ScoringFiles/PGS000843.txt.gz
PGS000031
(GRSt)
 PGP000020 |
Vassy JL et al. Diabetes (2014)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 62
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000031/ScoringFiles/PGS000031.txt.gz
PGS000121
(2018_BMD62_GRS.FN)
 PGP000056 |
Ho-Le TP et al. J Bone Miner Res (2016)
 Bone mineral density (BMD) bone density 62
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000121/ScoringFiles/PGS000121.txt.gz
PGS000485
(PRSWEB_PHECODE174.1_GWAS-Catalog-r2019-05-03-X174.1_P_5e-08_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Breast cancer (female) breast carcinoma 62
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000485/ScoringFiles/PGS000485.txt.gz
PGS000487
(PRSWEB_PHECODE174.1_GWAS-Catalog-r2019-05-03-X174.1_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Breast cancer (female) breast carcinoma 62
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000487/ScoringFiles/PGS000487.txt.gz
PGS002293
(PRS62_psoriasis)
 PGP000323 |
Shen M et al. J Am Acad Dermatol (2022)
 Psoriasis psoriasis 62
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002293/ScoringFiles/PGS002293.txt.gz
PGS003386
(best_COADREAD)
 PGP000413 |
Namba S et al. Cancer Res (2022)
 Colorectal cancer colorectal carcinoma 61
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003386/ScoringFiles/PGS003386.txt.gz
PGS001649
(GBE_INI25497)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA FA in tract corticospinal tract (R) neuroimaging measurement,
brain volume measurement		 60
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001649/ScoringFiles/PGS001649.txt.gz
PGS003345
(ALLGRS_FPG)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 Fasting plasma glucose fasting blood glucose measurement 60
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003345/ScoringFiles/PGS003345.txt.gz
PGS003853
(PRS60_TC)
 PGP000493 |
Li J et al. JAMA Netw Open (2023)
 Total cholesterol total cholesterol measurement 60
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003853/ScoringFiles/PGS003853.txt.gz
PGS004906
(PRS60_TSH)
 PGP000639 |
Mulder TA et al. Eur J Endocrinol (2023)
 Thyroid stimulating hormone concentration thyroid stimulating hormone measurement 60
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004906/ScoringFiles/PGS004906.txt.gz
PGS000822
(GRS_UACR)
 PGP000206 |
Teumer A et al. Nat Commun (2019)
 Urinary albumin to creatinine ratio urinary albumin to creatinine ratio 59
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000822/ScoringFiles/PGS000822.txt.gz
PGS003027
(ExPRSweb_Hypertension_finngen-R4-I9_DBSLMM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Hypertension hypertension 59
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003027/ScoringFiles/PGS003027.txt.gz
PGS003856
(PRS59_HDL)
 PGP000493 |
Li J et al. JAMA Netw Open (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 59
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003856/ScoringFiles/PGS003856.txt.gz
PGS004116
(pt_clump.auto.GCST90012877.AD)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Alzheimer's disease Alzheimer disease 58
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004116/ScoringFiles/PGS004116.txt.gz
PGS000057
(CHD57)
 PGP000042 |
Natarajan P et al. Circulation (2017)
 Coronary heart disease coronary artery disease 57
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000057/ScoringFiles/PGS000057.txt.gz
PGS000328
(GRS_SLE)
 PGP000099 |
Reid S et al. Ann Rheum Dis (2019)
 Systemic lupus erythematosus systemic lupus erythematosus 57
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000328/ScoringFiles/PGS000328.txt.gz
PGS000812
(AD-PRS_57)
 PGP000196 |
Najar J et al. Alzheimers Dement (Amst) (2021)
 Alzheimer's disease Alzheimer disease 57
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000812/ScoringFiles/PGS000812.txt.gz
PGS001251
(GBE_HC1052)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Other interstitial pulmonary diseases (time-to-event) interstitial lung disease 57
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001251/ScoringFiles/PGS001251.txt.gz
PGS003351
(ALLGRS_ALT)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 Alanine aminotransferase level serum alanine aminotransferase measurement 57
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003351/ScoringFiles/PGS003351.txt.gz
PGS003618
(L_CA1_head_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Left CA1 head volume hippocampal CA1 volume 57
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003618/ScoringFiles/PGS003618.txt.gz
PGS003745
(PRS57_SM)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Skin Melanoma cutaneous melanoma 57
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003745/ScoringFiles/PGS003745.txt.gz
PGS003762
(PRS57_amyloid)
 PGP000485 |
Mourtzi N et al. Alzheimers Dement (2023)
 Amyloid beta 42 beta-amyloid 1-42 measurement 57
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003762/ScoringFiles/PGS003762.txt.gz
PGS003960
(GRS57_SLE)
 PGP000509 |
Barnado A et al. Arthritis Rheumatol (2023)
 Systemic lupus erythematosus systemic lupus erythematosus 57
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003960/ScoringFiles/PGS003960.txt.gz
PGS000766
(PRS56_CM)
 PGP000172 |
Bakshi A et al. J Natl Cancer Inst (2021)
 Cutaneous melanoma cutaneous melanoma 56
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000766/ScoringFiles/PGS000766.txt.gz
PGS003022
(ExPRSweb_Hypertension_finngen-R4-FG_DBSLMM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Hypertension hypertension 56
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003022/ScoringFiles/PGS003022.txt.gz
PGS003336
(CVGRS_FPG)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 Fasting plasma glucose fasting blood glucose measurement 56
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003336/ScoringFiles/PGS003336.txt.gz
PGS003352
(ALLGRS_AST)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 Aspartate aminotransferase level aspartate aminotransferase measurement 56
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003352/ScoringFiles/PGS003352.txt.gz
PGS000714
(PRS55_PC)
 PGP000130 |
Sipeky C et al. Sci Rep (2020)
 Prostate cancer prostate carcinoma 55
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000714/ScoringFiles/PGS000714.txt.gz
PGS000067
(PCa_PHS)
 PGP000047 |
Seibert TM et al. BMJ (2018)
 Prostate cancer prostate carcinoma 54
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000067/ScoringFiles/PGS000067.txt.gz
PGS003343
(CVGRS_AST)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 Aspartate aminotransferase level aspartate aminotransferase measurement 54
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003343/ScoringFiles/PGS003343.txt.gz
PGS000047
(BCPRS_ER-)
 PGP000033 |
Kuchenbaecker KB et al. J Natl Cancer Inst (2017)
 Estrogen receptor [ER]-negative breast cancer estrogen-receptor negative breast cancer 53
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000047/ScoringFiles/PGS000047.txt.gz
PGS000362
(PRSWEB_PHECODE149.4_UKBB-SAIGE-HRC-X149.4_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Laryngeal cancer Malignant Laryngeal Neoplasm 53
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000362/ScoringFiles/PGS000362.txt.gz
PGS000877
(uwGRS53_IR)
 PGP000223 |
Lotta LA et al. Nat Genet (2016)
 Insulin resistance insulin resistance 53
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000877/ScoringFiles/PGS000877.txt.gz
Showing 4351 to 4400 of 5001 rows