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PGS Catalog
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Polygenic Scores (PGS)
Polygenic Scores (PGS)
Filter PGS by Participant Ancestry
Individuals included in:
Any Stage [G, D, E]
All Stages combined [G + D + E]
Development [G, D]
- GWAS [G]
- Score development [D]
PGS Evaluation [E]
G
- Source of Variant Associations (
G
WAS)
D
- Score
D
evelopment/Training
E
- PGS
E
valuation
List of ancestries includes:
--
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Display options:
Show European ancestry data
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only
Multi-ancestry data
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name
PGS Publication ID
(PGP)
Reported Trait
Mapped Trait(s)
(Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File
(FTP Link)
PGS004900
(GRS_BMI_males)
PGP000630
|
Wu Y
et al.
PLoS Genet (2020)
Body mass index (BMI)
body mass index
94
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004900/ScoringFiles/PGS004900.txt.gz
PGS004901
(GRS_BMI_females)
PGP000630
|
Wu Y
et al.
PLoS Genet (2020)
Body mass index (BMI)
body mass index
94
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004901/ScoringFiles/PGS004901.txt.gz
PGS004899
(PRS_SCAD)
PGP000629
|
Saw J
et al.
Nat Commun (2020)
Spontaneous coronary artery dissection
spontaneous coronary artery dissection
7
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004899/ScoringFiles/PGS004899.txt.gz
PGS004898
(PRS_AD)
PGP000624
|
Vasiljevic E
et al.
Alzheimers Dement (2023)
Alzheimer's disease
Alzheimer disease
44
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004898/ScoringFiles/PGS004898.txt.gz
PGS004896
(mAlb)
PGP000623
|
Cañadas-Garre M
et al.
Int J Mol Sci (2023)
Microalbuminuria
Moderate albuminuria
29
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004896/ScoringFiles/PGS004896.txt.gz
PGS004897
(UACR)
PGP000623
|
Cañadas-Garre M
et al.
Int J Mol Sci (2023)
Urinary albumin-to-creatinine ratio
urinary albumin to creatinine ratio
28
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004897/ScoringFiles/PGS004897.txt.gz
PGS004893
(overall.hybrid.prs)
PGP000621
|
Gao G
et al.
Hum Mol Genet (2022)
Breast cancer
breast carcinoma
56,943
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004893/ScoringFiles/PGS004893.txt.gz
PGS004894
(ERpos.prs)
PGP000621
|
Gao G
et al.
Hum Mol Genet (2022)
Estrogen receptor positive breast cancer
estrogen-receptor positive breast cancer
29,309
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004894/ScoringFiles/PGS004894.txt.gz
PGS004895
(ERneg.prs)
PGP000621
|
Gao G
et al.
Hum Mol Genet (2022)
Estrogen receptor negative breast cancer
estrogen-receptor negative breast cancer
28,405
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004895/ScoringFiles/PGS004895.txt.gz
PGS004887
(T2D_gePGS)
PGP000619
|
Mandla R
et al.
Genome Med (2024)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
1,117,628
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004887/ScoringFiles/PGS004887.txt.gz
PGS004888
(CAD_gePGS)
PGP000619
|
Mandla R
et al.
Genome Med (2024)
Coronary artery diseae
coronary artery disease
1,110,046
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004888/ScoringFiles/PGS004888.txt.gz
PGS004889
(CKD_gePGS)
PGP000619
|
Mandla R
et al.
Genome Med (2024)
Chronic kidney disease
chronic kidney disease
1,117,375
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004889/ScoringFiles/PGS004889.txt.gz
PGS004868
(T2DPGS)
PGP000617
|
Yun JS
et al.
Cardiovasc Diabetol (2022)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
6,580,804
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004868/ScoringFiles/PGS004868.txt.gz
PGS004865
(PRS105_BC)
PGP000612
|
Gao C
et al.
J Clin Oncol (2021)
Breast cancer
breast carcinoma
105
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004865/ScoringFiles/PGS004865.txt.gz
PGS004866
(PRS105_ERposBC)
PGP000612
|
Gao C
et al.
J Clin Oncol (2021)
ER-positive breast cancer
estrogen-receptor positive breast cancer
105
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004866/ScoringFiles/PGS004866.txt.gz
PGS004867
(PRS105_ERnegBC)
PGP000612
|
Gao C
et al.
J Clin Oncol (2021)
ER-negative breast cancer
estrogen-receptor negative breast cancer
105
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004867/ScoringFiles/PGS004867.txt.gz
PGS004864
(PRS186_BMI)
PGP000611
|
de Toro-Martín J
et al.
JCI Insight (2018)
Body mass index (BMI)
body mass index
186
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004864/ScoringFiles/PGS004864.txt.gz
PGS004863
(PRS74_AD)
PGP000609
|
Sleiman PM
et al.
Alzheimers Dement (2023)
Alzheimer's disease
Alzheimer disease
74
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004863/ScoringFiles/PGS004863.txt.gz
PGS004861
(hermes.gwama)
PGP000608
|
Zheng SL
et al.
medRxiv (2023)
|
Pre
Dilated cardiomyopathy
dilated cardiomyopathy
713,932
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004861/ScoringFiles/PGS004861.txt.gz
PGS004862
(hermes.mtag)
PGP000608
|
Zheng SL
et al.
medRxiv (2023)
|
Pre
Dilated cardiomyopathy (MTAG)
dilated cardiomyopathy
709,534
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004862/ScoringFiles/PGS004862.txt.gz
PGS004859
(T2D_PRS_CS)
PGP000605
|
Deutsch AJ
et al.
Diabetes Care (2023)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
1,108,235
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004859/ScoringFiles/PGS004859.txt.gz
PGS004701
(a1c_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
HbA1c
HbA1c measurement
1,107,927
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004701/ScoringFiles/PGS004701.txt.gz
PGS004702
(a1c_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
HbA1c
HbA1c measurement
6,652,699
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004702/ScoringFiles/PGS004702.txt.gz
PGS004703
(a1c_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
HbA1c
HbA1c measurement
3,872,159
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004703/ScoringFiles/PGS004703.txt.gz
PGS004704
(a1c_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
HbA1c
HbA1c measurement
6,652,699
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004704/ScoringFiles/PGS004704.txt.gz
PGS004705
(afib_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Atrial Fibrillation
atrial fibrillation
3,575,124
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004705/ScoringFiles/PGS004705.txt.gz
PGS004706
(afib_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Atrial Fibrillation
atrial fibrillation
3,576,958
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004706/ScoringFiles/PGS004706.txt.gz
PGS004707
(Albumin_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Albumin
serum albumin measurement
589,303
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004707/ScoringFiles/PGS004707.txt.gz
PGS004708
(Albumin_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Albumin
serum albumin measurement
2,071,924
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004708/ScoringFiles/PGS004708.txt.gz
PGS004709
(Albumin_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Albumin
serum albumin measurement
2,659,200
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004709/ScoringFiles/PGS004709.txt.gz
PGS004710
(Albumin_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Albumin
serum albumin measurement
2,071,924
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004710/ScoringFiles/PGS004710.txt.gz
PGS004711
(ALP_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Alkaline phosphatase
alkaline phosphatase measurement
634,277
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004711/ScoringFiles/PGS004711.txt.gz
PGS004712
(ALP_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Alkaline phosphatase
alkaline phosphatase measurement
1,704,295
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004712/ScoringFiles/PGS004712.txt.gz
PGS004713
(ALP_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Alkaline phosphatase
alkaline phosphatase measurement
4,268,599
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004713/ScoringFiles/PGS004713.txt.gz
PGS004714
(ALP_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Alkaline phosphatase
alkaline phosphatase measurement
1,704,295
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004714/ScoringFiles/PGS004714.txt.gz
PGS004715
(ALT_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Alanine aminotransferase
serum alanine aminotransferase measurement
559,731
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004715/ScoringFiles/PGS004715.txt.gz
PGS004716
(ALT_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Alanine aminotransferase
serum alanine aminotransferase measurement
2,283,693
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004716/ScoringFiles/PGS004716.txt.gz
PGS004717
(ALT_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Alanine aminotransferase
serum alanine aminotransferase measurement
1,051,633
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004717/ScoringFiles/PGS004717.txt.gz
PGS004718
(ALT_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Alanine aminotransferase
serum alanine aminotransferase measurement
2,283,693
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004718/ScoringFiles/PGS004718.txt.gz
PGS004719
(AST_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Aspartate aminotransferase level
aspartate aminotransferase measurement
519,241
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004719/ScoringFiles/PGS004719.txt.gz
PGS004720
(AST_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Aspartate aminotransferase level
aspartate aminotransferase measurement
1,000,300
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004720/ScoringFiles/PGS004720.txt.gz
PGS004721
(AST_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Aspartate aminotransferase level
aspartate aminotransferase measurement
1,196,185
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004721/ScoringFiles/PGS004721.txt.gz
PGS004722
(AST_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Aspartate aminotransferase level
aspartate aminotransferase measurement
868,009
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004722/ScoringFiles/PGS004722.txt.gz
PGS004723
(asthma_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Asthma
asthma
985,316
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004723/ScoringFiles/PGS004723.txt.gz
PGS004724
(asthma_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Asthma
asthma
2,342,250
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004724/ScoringFiles/PGS004724.txt.gz
PGS004725
(asthma_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Asthma
asthma
3,972,232
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004725/ScoringFiles/PGS004725.txt.gz
PGS004726
(asthma_PRSmixPlus_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Asthma
asthma
2,342,250
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004726/ScoringFiles/PGS004726.txt.gz
PGS004727
(Basophils_PRSmix_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Basophil count
basophil count
6,503
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004727/ScoringFiles/PGS004727.txt.gz
PGS004728
(Basophils_PRSmix_sas)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Basophil count
basophil count
6,132,012
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004728/ScoringFiles/PGS004728.txt.gz
PGS004729
(Basophils_PRSmixPlus_eur)
PGP000604
|
Truong B
et al.
Cell Genom (2024)
Basophil count
basophil count
1,538,675
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004729/ScoringFiles/PGS004729.txt.gz
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