Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS001923
(portability-PLR_geek_time)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Time spent watching television (TV) or using computer lifestyle measurement 50,583
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001923/ScoringFiles/PGS001923.txt.gz
PGS001924
(portability-PLR_glasses)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Wears glasses or contact lenses eye measurement 311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001924/ScoringFiles/PGS001924.txt.gz
PGS001925
(portability-PLR_haematocrit_perc)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Haematocrit percentage hematocrit 67,571
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001925/ScoringFiles/PGS001925.txt.gz
PGS001926
(portability-PLR_haemoglobin)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Haemoglobin concentration hemoglobin measurement 69,467
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001926/ScoringFiles/PGS001926.txt.gz
PGS001927
(portability-PLR_hand_grip_strength)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Hand grip strength (mean of both) grip strength measurement 73,846
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001927/ScoringFiles/PGS001927.txt.gz
PGS001928
(portability-PLR_headaches_for_3m)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Headaches for 3+ months headache disorder 5,709
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001928/ScoringFiles/PGS001928.txt.gz
PGS001929
(portability-PLR_height)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Standing height body height 156,514
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001929/ScoringFiles/PGS001929.txt.gz
PGS001930
(portability-PLR_immature_reticulocyte_frac)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Immature reticulocyte fraction reticulocyte amount 39,162
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001930/ScoringFiles/PGS001930.txt.gz
PGS001931
(portability-PLR_income)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Average total household income before tax household income 41,836
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001931/ScoringFiles/PGS001931.txt.gz
PGS001932
(portability-PLR_insomnia)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Sleeplessness / insomnia insomnia 37,712
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001932/ScoringFiles/PGS001932.txt.gz
PGS001933
(portability-PLR_LDL)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 LDL direct low density lipoprotein cholesterol measurement 25,604
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001933/ScoringFiles/PGS001933.txt.gz
PGS001934
(portability-PLR_less_alcohol)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Alcohol intake frequency alcohol consumption quality 50,955
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001934/ScoringFiles/PGS001934.txt.gz
PGS001935
(portability-PLR_less_happy_with_health)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 General happiness with own health health satisfaction measurement 9,070
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001935/ScoringFiles/PGS001935.txt.gz
PGS001936
(portability-PLR_less_happy)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 General happiness wellbeing measurement 10,628
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001936/ScoringFiles/PGS001936.txt.gz
PGS001937
(portability-PLR_less_tanned)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Ease of skin tanning suntan 16,197
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001937/ScoringFiles/PGS001937.txt.gz
PGS001938
(portability-PLR_log_age_first_sex)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Age first had sexual intercourse age at first sexual intercourse measurement 64,164
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001938/ScoringFiles/PGS001938.txt.gz
PGS001939
(portability-PLR_log_ALP)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Alkaline phosphatase alkaline phosphatase measurement 50,948
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001939/ScoringFiles/PGS001939.txt.gz
PGS001940
(portability-PLR_log_ALT)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Alanine aminotransferase serum alanine aminotransferase measurement 51,849
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001940/ScoringFiles/PGS001940.txt.gz
PGS001941
(portability-PLR_log_AST)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Aspartate aminotransferase level aspartate aminotransferase measurement 33,498
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001941/ScoringFiles/PGS001941.txt.gz
PGS001942
(portability-PLR_log_bilirubin)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Total bilirubin bilirubin measurement 33,190
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001942/ScoringFiles/PGS001942.txt.gz
PGS001943
(portability-PLR_log_BMI)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Body mass index (BMI) body mass index 110,153
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001943/ScoringFiles/PGS001943.txt.gz
PGS001944
(portability-PLR_log_creatinine_urine)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Creatinine (enzymatic) in urine creatinine clearance measurement 37,529
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001944/ScoringFiles/PGS001944.txt.gz
PGS001945
(portability-PLR_log_creatinine)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Creatinine serum creatinine amount 76,800
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001945/ScoringFiles/PGS001945.txt.gz
PGS001946
(portability-PLR_log_CRP)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 C-reactive protein C-reactive protein measurement 71,444
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001946/ScoringFiles/PGS001946.txt.gz
PGS001947
(portability-PLR_log_cystatinC)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Cystatin C cystatin C measurement 84,459
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001947/ScoringFiles/PGS001947.txt.gz
PGS001948
(portability-PLR_log_ECG_QRS_duration)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 QRS duration QRS duration 1,967
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001948/ScoringFiles/PGS001948.txt.gz
PGS001949
(portability-PLR_log_eosinophil_perc)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Eosinophil percentage eosinophil percentage of leukocytes 9,236
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001949/ScoringFiles/PGS001949.txt.gz
PGS001950
(portability-PLR_log_fat_free_mass)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Whole body fat-free mass lean body mass 128,827
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001950/ScoringFiles/PGS001950.txt.gz
PGS001951
(portability-PLR_log_fat_mass)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Whole body fat mass fat pad mass 107,776
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001951/ScoringFiles/PGS001951.txt.gz
PGS001952
(portability-PLR_log_glucose)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Glucose glucose measurement 14,811
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001952/ScoringFiles/PGS001952.txt.gz
PGS001953
(portability-PLR_log_HbA1c)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Glycated haemoglobin (HbA1c) HbA1c measurement 46,566
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001953/ScoringFiles/PGS001953.txt.gz
PGS001954
(portability-PLR_log_HDL)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 HDL cholesterol high density lipoprotein cholesterol measurement 85,429
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001954/ScoringFiles/PGS001954.txt.gz
PGS001955
(portability-PLR_log_heel_BMD)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Heel bone mineral density (BMD) heel bone mineral density 73,565
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001955/ScoringFiles/PGS001955.txt.gz
PGS001956
(portability-PLR_log_heel_BUA)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Heel Broadband ultrasound attenuation, direct entry heel bone mineral density 69,537
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001956/ScoringFiles/PGS001956.txt.gz
PGS001957
(portability-PLR_log_heel_SoS)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Speed of sound through heel velocity of sound measurement 65,064
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001957/ScoringFiles/PGS001957.txt.gz
PGS001958
(portability-PLR_log_hip_circ)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Hip circumference hip circumference 103,123
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001958/ScoringFiles/PGS001958.txt.gz
PGS001959
(portability-PLR_log_HLR_reticulocyte)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 High light scatter reticulocyte count reticulocyte measurement 78,803
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001959/ScoringFiles/PGS001959.txt.gz
PGS001960
(portability-PLR_log_IGF1)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 IGF-1 IGF-1 measurement 87,149
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001960/ScoringFiles/PGS001960.txt.gz
PGS001961
(portability-PLR_log_impedance)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Impedance of whole body body composition measurement 119,500
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001961/ScoringFiles/PGS001961.txt.gz
PGS001962
(portability-PLR_log_leukocyte)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 White blood cell (leukocyte) count leukocyte quantity 80,228
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001962/ScoringFiles/PGS001962.txt.gz
PGS001963
(portability-PLR_log_lipoA)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Lipoprotein A lipoprotein A measurement 7,887
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001963/ScoringFiles/PGS001963.txt.gz
PGS001964
(portability-PLR_log_log_gammaGT)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Gamma-glutamyl transferase serum gamma-glutamyl transferase measurement 76,069
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001964/ScoringFiles/PGS001964.txt.gz
PGS001965
(portability-PLR_log_lymphocyte)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Lymphocyte count lymphocyte count 76,535
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001965/ScoringFiles/PGS001965.txt.gz
PGS001966
(portability-PLR_log_mean_carotid_IMT)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Mean carotid IMT (intima-medial thickness) at 120/150/210/240 degrees carotid artery thickness 11,600
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001966/ScoringFiles/PGS001966.txt.gz
PGS001967
(portability-PLR_log_microalbumin_urine)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Microalbumin in urine urinary microalbumin measurement 948
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001967/ScoringFiles/PGS001967.txt.gz
PGS001968
(portability-PLR_log_monocyte)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Monocyte count monocyte count 46,673
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001968/ScoringFiles/PGS001968.txt.gz
PGS001969
(portability-PLR_log_neutrophil)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Neutrophil count neutrophil count 71,566
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001969/ScoringFiles/PGS001969.txt.gz
PGS001970
(portability-PLR_log_platelet_crit)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Platelet crit platelet crit 56,402
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001970/ScoringFiles/PGS001970.txt.gz
PGS001971
(portability-PLR_log_platelet_volume)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Mean platelet (thrombocyte) volume platelet volume 65,450
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001971/ScoringFiles/PGS001971.txt.gz
PGS001972
(portability-PLR_log_platelet_width)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Platelet distribution width platelet component distribution width 46,157
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001972/ScoringFiles/PGS001972.txt.gz
Showing 1851 to 1900 of 5091 rows