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PGS Catalog
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Polygenic Scores (PGS)
Polygenic Scores (PGS)
Filter PGS by Participant Ancestry
Individuals included in:
Any Stage [G, D, E]
All Stages combined [G + D + E]
Development [G, D]
- GWAS [G]
- Score development [D]
PGS Evaluation [E]
G
- Source of Variant Associations (
G
WAS)
D
- Score
D
evelopment/Training
E
- PGS
E
valuation
List of ancestries includes:
--
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Display options:
Show European ancestry data
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only
Multi-ancestry data
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name
PGS Publication ID
(PGP)
Reported Trait
Mapped Trait(s)
(Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File
(FTP Link)
PGS004534
(meta.I84.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
I84 (Hemorrhoids)
hemorrhoid
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004534/ScoringFiles/PGS004534.txt.gz
PGS004535
(meta.J33.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
J33 (Nasal polyp)
Nasal Cavity Polyp
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004535/ScoringFiles/PGS004535.txt.gz
PGS004536
(meta.J44.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
J44 (Other chronic obstructive pulmonary disease)
chronic obstructive pulmonary disease
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004536/ScoringFiles/PGS004536.txt.gz
PGS004537
(meta.J45.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
J45 (Asthma)
asthma
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004537/ScoringFiles/PGS004537.txt.gz
PGS004538
(meta.K21.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
K21 (Gastroesophageal reflux disease)
gastroesophageal reflux disease
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004538/ScoringFiles/PGS004538.txt.gz
PGS004539
(meta.K22.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
K22 (Other diseases of oesophagus)
esophageal disease
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004539/ScoringFiles/PGS004539.txt.gz
PGS004540
(meta.K29.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
K29 (Gastritis and duodenitis)
gastritis
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004540/ScoringFiles/PGS004540.txt.gz
PGS004541
(meta.K40.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
K40 (Inguinal hernia)
Inguinal hernia
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004541/ScoringFiles/PGS004541.txt.gz
PGS004542
(meta.K42.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
K42 (Umbilical hernia)
Umbilical hernia
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004542/ScoringFiles/PGS004542.txt.gz
PGS004543
(meta.K44.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
K44 (Diaphragmatic hernia)
diaphragmatic hernia
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004543/ScoringFiles/PGS004543.txt.gz
PGS004544
(meta.K57.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
K57 (Diverticular disease of intestine)
diverticular disease
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004544/ScoringFiles/PGS004544.txt.gz
PGS004545
(meta.K59.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
K59 (Other functional intestinal disorders)
intestinal disease
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004545/ScoringFiles/PGS004545.txt.gz
PGS004546
(meta.K80.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
K80 (Cholelithiasis)
cholelithiasis
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004546/ScoringFiles/PGS004546.txt.gz
PGS004547
(meta.M13.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
M13 (Other arthritis)
arthritis
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004547/ScoringFiles/PGS004547.txt.gz
PGS004548
(meta.M16.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
M16 (Coxarthrosis [arthrosis of hip])
osteoarthritis, hip
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004548/ScoringFiles/PGS004548.txt.gz
PGS004549
(meta.M17.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
M17 (Gonarthrosis [arthrosis of knee])
osteoarthritis, knee
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004549/ScoringFiles/PGS004549.txt.gz
PGS004550
(meta.M19.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
M19 (Other arthrosis)
joint disease
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004550/ScoringFiles/PGS004550.txt.gz
PGS004551
(meta.M20.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
M20 (Acquired deformities of fingers and toes)
congenital deformities of limbs
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004551/ScoringFiles/PGS004551.txt.gz
PGS004552
(meta.M23.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
M23 (Internal derangement of knee)
knee injury
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004552/ScoringFiles/PGS004552.txt.gz
PGS004553
(meta.M25.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
M25 (Other joint disorders, not elsewhere classified)
joint disease
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004553/ScoringFiles/PGS004553.txt.gz
PGS004554
(meta.M47.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
M47 (Spondylosis)
spondylosis
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004554/ScoringFiles/PGS004554.txt.gz
PGS004555
(meta.M48.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
M48 (Other spondylopathies)
spondylosis
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004555/ScoringFiles/PGS004555.txt.gz
PGS004556
(meta.M51.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
M51 (Other intervertebral disk disorders)
Intervertebral Disc Displacement
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004556/ScoringFiles/PGS004556.txt.gz
PGS004557
(meta.M54.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
M54 (Dorsalgia)
Back pain
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004557/ScoringFiles/PGS004557.txt.gz
PGS004558
(meta.M75.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
M75 (Shoulder lesions)
soft tissue disease
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004558/ScoringFiles/PGS004558.txt.gz
PGS004559
(meta.M79.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
M79 (Other soft tissue disorders, not elsewhere classified)
soft tissue disease
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004559/ScoringFiles/PGS004559.txt.gz
PGS004560
(meta.M81.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
M81 (Osteoporosis without pathological fracture)
osteoporosis
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004560/ScoringFiles/PGS004560.txt.gz
PGS004561
(meta.N17.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
N17 (Acute renal failure)
acute kidney failure
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004561/ScoringFiles/PGS004561.txt.gz
PGS004562
(meta.N18.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
N18 (Chronic renal failure)
kidney failure
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004562/ScoringFiles/PGS004562.txt.gz
PGS004563
(meta.N20.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
N20 (Calculus of kidney and ureter)
nephrolithiasis
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004563/ScoringFiles/PGS004563.txt.gz
PGS004564
(meta.N39.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
N39 (Other disorders of urinary system)
urinary system disease
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004564/ScoringFiles/PGS004564.txt.gz
PGS004565
(meta.osteoporosis.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
Osteoporosis
osteoporosis
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004565/ScoringFiles/PGS004565.txt.gz
PGS004566
(meta.R07.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
R07 (Pain in throat and chest)
Chest pain
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004566/ScoringFiles/PGS004566.txt.gz
PGS004567
(meta.R10.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
R10 (Abdominal and pelvic pain)
Abdominal pain
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004567/ScoringFiles/PGS004567.txt.gz
PGS004568
(meta.R55.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
R55 (Syncope and collapse)
Syncope
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004568/ScoringFiles/PGS004568.txt.gz
PGS004569
(meta.T2D.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004569/ScoringFiles/PGS004569.txt.gz
PGS004570
(meta.T84.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
T84 (Complications of internal orthopaedic prosthetic devices, implants and grafts)
device complication
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004570/ScoringFiles/PGS004570.txt.gz
PGS004571
(meta.VTE.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
Venous thromboembolism (VTE)
venous thromboembolism
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004571/ScoringFiles/PGS004571.txt.gz
PGS004572
(meta.Z53.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
Z53 (Persons encountering health services for specifie procedures, not carried out)
encounter with health service
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004572/ScoringFiles/PGS004572.txt.gz
PGS004573
(meta.Z72.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
Z72 (Problems related to lifestyle)
wellbeing measurement
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004573/ScoringFiles/PGS004573.txt.gz
PGS004574
(meta.Z82.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
Z82 (Family history of certain disabilities and chronic diseases leading to disablement)
family history
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004574/ScoringFiles/PGS004574.txt.gz
PGS004575
(meta.Z88.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
Z88 (Personal history of allergy to drugs, medicaments and biologocal substances)
clinical history
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004575/ScoringFiles/PGS004575.txt.gz
PGS004576
(meta.Z92.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
Z92 (Personal history of medical treatment)
clinical history
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004576/ScoringFiles/PGS004576.txt.gz
PGS004577
(meta.Z95.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
Z95 (Presence of cardiac and vascular implants and grafts)
medical procedure
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004577/ScoringFiles/PGS004577.txt.gz
PGS004578
(meta.Z96.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
Z96 (Presence of other functional implants)
medical procedure
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004578/ScoringFiles/PGS004578.txt.gz
PGS004579
(BRCA_PRSCS)
PGP000562
|
Youssef O
et al.
Lab Invest (2024)
Breast cancer
breast carcinoma
1,088,163
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004579/ScoringFiles/PGS004579.txt.gz
PGS004580
(CRC_PRSCS)
PGP000562
|
Youssef O
et al.
Lab Invest (2024)
Colorectal cancer
colorectal carcinoma
1,099,906
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004580/ScoringFiles/PGS004580.txt.gz
PGS004581
(PRCA_PRSCS)
PGP000562
|
Youssef O
et al.
Lab Invest (2024)
Prostate cancer
prostate carcinoma
1,102,292
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004581/ScoringFiles/PGS004581.txt.gz
PGS004582
(PRSice_T1)
PGP000563
|
Yang Z
et al.
Blood (2023)
Platelet count during the first trimester
platelet count
407,667
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004582/ScoringFiles/PGS004582.txt.gz
PGS004583
(PRSice_T2)
PGP000563
|
Yang Z
et al.
Blood (2023)
Platelet count during the second trimester
platelet count
104,759
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004583/ScoringFiles/PGS004583.txt.gz
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