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breast cancer
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glaucoma
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BMI
,
EFO_0001645
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breast cancer
,
glaucoma
,
BMI
,
EFO_0001645
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PGS Catalog
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Polygenic Scores (PGS)
Polygenic Scores (PGS)
Filter PGS by Participant Ancestry
Individuals included in:
Any Stage [G, D, E]
All Stages combined [G + D + E]
Development [G, D]
- GWAS [G]
- Score development [D]
PGS Evaluation [E]
G
- Source of Variant Associations (
G
WAS)
D
- Score
D
evelopment/Training
E
- PGS
E
valuation
List of ancestries includes:
--
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Display options:
Show European ancestry data
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Multi-ancestry data
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name
PGS Publication ID
(PGP)
Reported Trait
Mapped Trait(s)
(Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File
(FTP Link)
PGS004574
(meta.Z82.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
Z82 (Family history of certain disabilities and chronic diseases leading to disablement)
family history
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004574/ScoringFiles/PGS004574.txt.gz
PGS004575
(meta.Z88.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
Z88 (Personal history of allergy to drugs, medicaments and biologocal substances)
clinical history
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004575/ScoringFiles/PGS004575.txt.gz
PGS004576
(meta.Z92.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
Z92 (Personal history of medical treatment)
clinical history
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004576/ScoringFiles/PGS004576.txt.gz
PGS004577
(meta.Z95.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
Z95 (Presence of cardiac and vascular implants and grafts)
medical procedure
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004577/ScoringFiles/PGS004577.txt.gz
PGS004578
(meta.Z96.score)
PGP000561
|
Jung H
et al.
Commun Biol (2024)
Z96 (Presence of other functional implants)
medical procedure
1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004578/ScoringFiles/PGS004578.txt.gz
PGS004579
(BRCA_PRSCS)
PGP000562
|
Youssef O
et al.
Lab Invest (2024)
Breast cancer
breast carcinoma
1,088,163
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004579/ScoringFiles/PGS004579.txt.gz
PGS004580
(CRC_PRSCS)
PGP000562
|
Youssef O
et al.
Lab Invest (2024)
Colorectal cancer
colorectal carcinoma
1,099,906
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004580/ScoringFiles/PGS004580.txt.gz
PGS004581
(PRCA_PRSCS)
PGP000562
|
Youssef O
et al.
Lab Invest (2024)
Prostate cancer
prostate carcinoma
1,102,292
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004581/ScoringFiles/PGS004581.txt.gz
PGS004582
(PRSice_T1)
PGP000563
|
Yang Z
et al.
Blood (2023)
Platelet count during the first trimester
platelet count
407,667
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004582/ScoringFiles/PGS004582.txt.gz
PGS004583
(PRSice_T2)
PGP000563
|
Yang Z
et al.
Blood (2023)
Platelet count during the second trimester
platelet count
104,759
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004583/ScoringFiles/PGS004583.txt.gz
PGS004584
(PRSice_T3)
PGP000563
|
Yang Z
et al.
Blood (2023)
Platelet count during the third trimester
platelet count
5,597
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004584/ScoringFiles/PGS004584.txt.gz
PGS004585
(PRSice_GT)
PGP000563
|
Yang Z
et al.
Blood (2023)
Gestational thrombocytopenia
Thrombocytopenia
475,029
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004585/ScoringFiles/PGS004585.txt.gz
PGS004586
(PPS_CRC)
PGP000564
|
Xin J
et al.
Nat Commun (2024)
Colorectal cancer
colorectal carcinoma
287
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004586/ScoringFiles/PGS004586.txt.gz
PGS004587
(PRS23_AD)
PGP000566
|
Gu X
et al.
Ecotoxicol Environ Saf (2023)
Atopic dermatitis
atopic eczema
23
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004587/ScoringFiles/PGS004587.txt.gz
PGS004588
(PRS39_Eur)
PGP000567
|
Jung SH
et al.
JAMA Netw Open (2022)
Alzheimer's disease
Alzheimer disease
39
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004588/ScoringFiles/PGS004588.txt.gz
PGS004589
(PRS80_trans)
PGP000567
|
Jung SH
et al.
JAMA Netw Open (2022)
Alzheimer's disease
Alzheimer disease
80
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004589/ScoringFiles/PGS004589.txt.gz
PGS004590
(PRS363_rand_eff)
PGP000569
|
Lake J
et al.
Mol Psychiatry (2023)
Alzheimer's disease
Alzheimer disease
363
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004590/ScoringFiles/PGS004590.txt.gz
PGS004591
(PRS17_MDD)
PGP000570
|
Li D
et al.
BMC Med (2023)
Major depressive disorder
major depressive disorder
17
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004591/ScoringFiles/PGS004591.txt.gz
PGS004592
(PRS_KC)
PGP000571
|
Liyanage UE
et al.
J Eur Acad Dermatol Venereol (2022)
Keratinocyte cancer
keratinocyte carcinoma
78
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004592/ScoringFiles/PGS004592.txt.gz
PGS004593
(pe)
PGP000574
|
Nurkkala J
et al.
J Hypertens (2022)
Preeclampsia
preeclampsia
1,102,059
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004593/ScoringFiles/PGS004593.txt.gz
PGS004594
(ukb.sbp.female)
PGP000574
|
Nurkkala J
et al.
J Hypertens (2022)
Systolic blood pressure
systolic blood pressure
1,097,355
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004594/ScoringFiles/PGS004594.txt.gz
PGS004595
(PRS_CHD)
PGP000575
|
Oni-Orisan A
et al.
Clin Pharmacol Ther (2022)
Coronary heart disease
coronary artery disease
164
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004595/ScoringFiles/PGS004595.txt.gz
PGS004596
(PRS64_CHD)
PGP000576
|
Peng H
et al.
Nutrients (2023)
Coronary heart disease
coronary artery disease
64
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004596/ScoringFiles/PGS004596.txt.gz
PGS004597
(PRS32_IS)
PGP000576
|
Peng H
et al.
Nutrients (2023)
Ischemic stroke
stroke
,
Ischemic stroke
32
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004597/ScoringFiles/PGS004597.txt.gz
PGS004598
(PRS12_HF)
PGP000576
|
Peng H
et al.
Nutrients (2023)
Heart failure
heart failure
12
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004598/ScoringFiles/PGS004598.txt.gz
PGS004599
(PRS102_Pca)
PGP000577
|
Ruan X
et al.
J Clin Med (2023)
Prostate cancer
prostate carcinoma
102
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004599/ScoringFiles/PGS004599.txt.gz
PGS004600
(PRS_AD83)
PGP000578
|
Tomassen J
et al.
BMC Neurol (2022)
Alzheimer's disease
Alzheimer disease
83
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004600/ScoringFiles/PGS004600.txt.gz
PGS004601
(PRS17_Pca)
PGP000579
|
Wu Y
et al.
Clin Genet (2023)
Prostate cancer
prostate carcinoma
17
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004601/ScoringFiles/PGS004601.txt.gz
PGS004602
(PRS424_T2D)
PGP000580
|
Zhuang P
et al.
Diabetes Care (2021)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
424
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004602/ScoringFiles/PGS004602.txt.gz
PGS004603
(SBP-meta-analysis)
PGP000581
|
Keaton JM
et al.
Nat Genet (2024)
Systolic blood pressure
systolic blood pressure
7,356,519
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004603/ScoringFiles/PGS004603.txt.gz
PGS004604
(DBP-meta-analysis)
PGP000581
|
Keaton JM
et al.
Nat Genet (2024)
Diastolic blood pressure
diastolic blood pressure
7,356,519
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004604/ScoringFiles/PGS004604.txt.gz
PGS004605
(PP-meta-analysis)
PGP000581
|
Keaton JM
et al.
Nat Genet (2024)
Pulse pressure
pulse pressure measurement
7,356,519
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004605/ScoringFiles/PGS004605.txt.gz
PGS004606
(AMD-IAMDGC-EUR)
PGP000582
|
Gorman BR
et al.
medRxiv (2022)
|
Pre
Age-related macular degeneration
age-related macular degeneration
1,000,946
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004606/ScoringFiles/PGS004606.txt.gz
PGS004607
(AMD-MVP-AFR)
PGP000582
|
Gorman BR
et al.
medRxiv (2022)
|
Pre
Age-related macular degeneration
age-related macular degeneration
1,067,520
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004607/ScoringFiles/PGS004607.txt.gz
PGS004608
(neuroticism)
PGP000584
|
Forthman KL
et al.
J Psychiatr Res (2023)
Neuroticism
neuroticism measurement
1,000,537
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004608/ScoringFiles/PGS004608.txt.gz
PGS004609
(adult_BMI)
PGP000585
|
Hawkes G
et al.
Diabetologia (2023)
Body mass index (BMI)
body mass index
1,127
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004609/ScoringFiles/PGS004609.txt.gz
PGS004610
(child_BMI)
PGP000585
|
Hawkes G
et al.
Diabetologia (2023)
Body mass index (BMI)
body mass index
306
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004610/ScoringFiles/PGS004610.txt.gz
PGS004611
(RORP_PRS)
PGP000590
|
Shieh Y
et al.
NPJ Precis Oncol (2023)
Breast cancer
breast carcinoma
76
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004611/ScoringFiles/PGS004611.txt.gz
PGS004612
(PRSECG_AI)
PGP000591
|
Wang X
et al.
Circ Genom Precis Med (2023)
ECG-AI predicted 5-year risk of atrial fibrillation
atrial fibrillation
1,117,399
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004612/ScoringFiles/PGS004612.txt.gz
PGS004613
(PRSCHARGE_AF)
PGP000591
|
Wang X
et al.
Circ Genom Precis Med (2023)
CHARGE-AF predicted 5-year risk of atrial fibrillation
atrial fibrillation
1,117,400
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004613/ScoringFiles/PGS004613.txt.gz
PGS004614
(DivD_SNPWeights)
PGP000592
|
Wu Y
et al.
Cell Genom (2023)
Diverticular disease
diverticular disease
1,082,282
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004614/ScoringFiles/PGS004614.txt.gz
PGS004615
(PGS_weights_TMM_All_of_1group)
PGP000593
|
Ojima T
et al.
Nat Genet (2024)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
855,161
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004615/ScoringFiles/PGS004615.txt.gz
PGS004616
(PGS_weights_TMM_HighBMI_of_2groups)
PGP000593
|
Ojima T
et al.
Nat Genet (2024)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
855,161
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004616/ScoringFiles/PGS004616.txt.gz
PGS004617
(PGS_weights_TMM_LowBMI_of_2groups)
PGP000593
|
Ojima T
et al.
Nat Genet (2024)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
855,161
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004617/ScoringFiles/PGS004617.txt.gz
PGS004618
(PGS_weights_BBJ2nd_All_of_1group)
PGP000593
|
Ojima T
et al.
Nat Genet (2024)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
728,824
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004618/ScoringFiles/PGS004618.txt.gz
PGS004619
(PGS_weights_BBJ2nd_HighBMI_of_2groups)
PGP000593
|
Ojima T
et al.
Nat Genet (2024)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
728,824
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004619/ScoringFiles/PGS004619.txt.gz
PGS004620
(PGS_weights_BBJ2nd_LowBMI_of_2groups)
PGP000593
|
Ojima T
et al.
Nat Genet (2024)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
728,824
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004620/ScoringFiles/PGS004620.txt.gz
PGS004621
(cirrhosis_pgs_eur)
PGP000594
|
Ghouse J
et al.
Nat Genet (2024)
Cirrhosis
cirrhosis of liver
1,089,806
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004621/ScoringFiles/PGS004621.txt.gz
PGS004622
(HDL_AFR_lassosum2)
PGP000595
|
Zhang J
et al.
Nat Commun (2024)
HDL cholesterol
high density lipoprotein cholesterol measurement
15,978
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004622/ScoringFiles/PGS004622.txt.gz
PGS004623
(HDL_AFR_ldpred2)
PGP000595
|
Zhang J
et al.
Nat Commun (2024)
HDL cholesterol
high density lipoprotein cholesterol measurement
1,683,003
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004623/ScoringFiles/PGS004623.txt.gz
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