Latest Release - June 1, 2023

New Publications (6)

PGS Publication/Study ID (PGP) PGS Developed PGS Evaluated First Author Title Journal Name Publication Date Digital object identifier (doi) PubMed ID (PMID)
PGP000468 0 1 Hodel F Associations of genetic and infectious risk factors with coronary heart disease. Elife 14/02/2023 10.7554/elife.79742 36785929
PGP000412 2 2 Kachuri L Leveraging Genetic Determinants of Prostate-Specific Antigen Levels Towards Improving Prostate Cancer Screening Nat Med 01/06/2023 10.1038/s41591-023-02277-9
PGP000467 0 5 Farré X Skin Phototype and Disease: A Comprehensive Genetic Approach to Pigmentary Traits Pleiotropy Using PRS in the GCAT Cohort. Genes (Basel) 05/01/2023 10.3390/genes14010149 36672889
PGP000445 3 3 Huerta-Chagoya A The power of TOPMed imputation for the discovery of Latino-enriched rare variants associated with type 2 diabetes. Diabetologia 06/05/2023 10.1007/s00125-023-05912-9 37148359
PGP000469 8 8 Wedekind LE The utility of a type 2 diabetes polygenic score in addition to clinical variables for prediction of type 2 diabetes incidence in birth, youth and adult cohorts in an Indigenous study population. Diabetologia 02/03/2023 10.1007/s00125-023-05870-2 36862161
PGP000470 11 11 Xin J Prognostic evaluation of polygenic risk score underlying pan-cancer analysis: evidence from two large-scale cohorts. EBioMedicine 03/02/2023 10.1016/j.ebiom.2023.104454 36739632

New Polygenic Scores (24)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
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Additional Diverse Ancestries
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Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution Scoring File (FTP Link)
PGS003378
(PSA_PGS_128)
PGP000412 |
Kachuri L et al. Nat Med (2023)
Prostate-specific antigen (PSA) levels prostate specific antigen measurement 128
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003378/ScoringFiles/PGS003378.txt.gz
PGS003379
(PSA_PGS_CSx)
PGP000412 |
Kachuri L et al. Nat Med (2023)
Prostate-specific antigen (PSA) levels prostate specific antigen measurement 1,071,278
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003379/ScoringFiles/PGS003379.txt.gz
PGS003443
(PRScsx_T2D_LAT_EURweights)
PGP000445 |
Huerta-Chagoya A et al. Diabetologia (2023)
type 2 diabetes type 2 diabetes mellitus 1,092,496
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003443/ScoringFiles/PGS003443.txt.gz
PGS003444
(PRScsx_T2D_LAT_EASweights)
PGP000445 |
Huerta-Chagoya A et al. Diabetologia (2023)
type 2 diabetes type 2 diabetes mellitus 1,001,579
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003444/ScoringFiles/PGS003444.txt.gz
PGS003445
(PRScsx_T2D_LAT_LATweights)
PGP000445 |
Huerta-Chagoya A et al. Diabetologia (2023)
type 2 diabetes type 2 diabetes mellitus 1,149,210
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003445/ScoringFiles/PGS003445.txt.gz
PGS003728
(PS_T2D_183-AGEN)
PGP000469 |
Wedekind LE et al. Diabetologia (2023)
Type 2 diabetes type 2 diabetes mellitus 183
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003728/ScoringFiles/PGS003728.txt.gz
PGS003729
(PS_T2D_293-DIAGRAM)
PGP000469 |
Wedekind LE et al. Diabetologia (2023)
Type 2 diabetes type 2 diabetes mellitus 293
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003729/ScoringFiles/PGS003729.txt.gz
PGS003730
(PS_T2D_287-DIAMANTE)
PGP000469 |
Wedekind LE et al. Diabetologia (2023)
Type 2 diabetes type 2 diabetes mellitus 287
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003730/ScoringFiles/PGS003730.txt.gz
PGS003731
(PS_T2D_282-SAS-DIAMANTE)
PGP000469 |
Wedekind LE et al. Diabetologia (2023)
Type 2 diabetes type 2 diabetes mellitus 282
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003731/ScoringFiles/PGS003731.txt.gz
PGS003732
(PS_T2D_287-HIS-DIAMANTE)
PGP000469 |
Wedekind LE et al. Diabetologia (2023)
Type 2 diabetes type 2 diabetes mellitus 287
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003732/ScoringFiles/PGS003732.txt.gz
PGS003733
(PS_T2D_287-EUR-DIAMANTE)
PGP000469 |
Wedekind LE et al. Diabetologia (2023)
Type 2 diabetes type 2 diabetes mellitus 287
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003733/ScoringFiles/PGS003733.txt.gz
PGS003734
(PS_T2D_280-EAS-DIAMANTE)
PGP000469 |
Wedekind LE et al. Diabetologia (2023)
Type 2 diabetes type 2 diabetes mellitus 280
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003734/ScoringFiles/PGS003734.txt.gz
PGS003735
(PS_T2D_276-AFR-DIAMANTE)
PGP000469 |
Wedekind LE et al. Diabetologia (2023)
Type 2 diabetes type 2 diabetes mellitus 276
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003735/ScoringFiles/PGS003735.txt.gz
PGS003736
(PRS13_BlC)
PGP000470 |
Xin J et al. EBioMedicine (2023)
Bladder cancer urinary bladder cancer 13
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003736/ScoringFiles/PGS003736.txt.gz
PGS003737
(PRS26_BrC)
PGP000470 |
Xin J et al. EBioMedicine (2023)
Brain cancer brain neoplasm 26
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003737/ScoringFiles/PGS003737.txt.gz
PGS003738
(PRS136_BC)
PGP000470 |
Xin J et al. EBioMedicine (2023)
Breast cancer breast carcinoma 136
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003738/ScoringFiles/PGS003738.txt.gz
PGS003739
(PRS81_CoC)
PGP000470 |
Xin J et al. EBioMedicine (2023)
Colorectal cancer colorectal carcinoma 81
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003739/ScoringFiles/PGS003739.txt.gz
PGS003740
(PRS16_CU)
PGP000470 |
Xin J et al. EBioMedicine (2023)
Corpus Uteri uterine corpus cancer 16
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003740/ScoringFiles/PGS003740.txt.gz
PGS003741
(PRS28_OC)
PGP000470 |
Xin J et al. EBioMedicine (2023)
Ovarian cancer ovarian carcinoma 28
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003741/ScoringFiles/PGS003741.txt.gz
PGS003742
(PRS19_PC)
PGP000470 |
Xin J et al. EBioMedicine (2023)
Pancreatic cancer pancreatic neoplasm 19
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003742/ScoringFiles/PGS003742.txt.gz
PGS003743
(PRS118_PrC)
PGP000470 |
Xin J et al. EBioMedicine (2023)
Prostate cancer prostate carcinoma 118
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003743/ScoringFiles/PGS003743.txt.gz
PGS003744
(PRS14_RC)
PGP000470 |
Xin J et al. EBioMedicine (2023)
Renal cancer renal carcinoma 14
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003744/ScoringFiles/PGS003744.txt.gz
PGS003745
(PRS57_SM)
PGP000470 |
Xin J et al. EBioMedicine (2023)
Skin Melanoma cutaneous melanoma 57
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003745/ScoringFiles/PGS003745.txt.gz
PGS003746
(PRS11_TC)
PGP000470 |
Xin J et al. EBioMedicine (2023)
Thyroid cancer thyroid carcinoma 11
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003746/ScoringFiles/PGS003746.txt.gz